Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 8.4e-166 587.0 313 100.0
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 6.3e-121 438.0 318 77.4
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 2.4e-120 436.0 313 78.3
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 2.0e-119 433.0 309 77.3
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 2.5e-117 426.0 263 85.6
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 4.2e-117 425.2 309 76.4
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 7.2e-117 424.5 330 74.2
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 9.4e-117 424.1 320 75.3
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 3.1e-112 409.1 293 75.8
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 4.5e-111 405.2 261 80.8
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 5.9e-111 404.8 363 66.9
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 1.0e-110 404.1 262 80.5
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 1.3e-110 403.7 261 80.8
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 1.3e-110 403.7 321 70.1
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 2.2e-110 402.9 281 76.9
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 5.0e-110 401.7 261 80.5
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 6.5e-110 401.4 261 81.2
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 8.5e-110 401.0 345 67.8
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 1.1e-109 400.6 261 79.7
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 1.1e-109 400.6 261 80.1
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.1e-109 400.6 300 73.3
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 1.5e-109 400.2 267 79.8
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 2.1e-108 396.4 261 80.5
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 2.1e-108 396.4 329 69.3
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 6.1e-108 394.8 274 76.6
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 6.1e-108 394.8 315 69.5
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 8.0e-108 394.4 297 72.1
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 1.0e-107 394.0 297 71.7
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 1.0e-107 394.0 303 71.6
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 1.4e-107 393.7 297 71.7
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 1.8e-107 393.3 275 75.6
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.8e-107 393.3 275 75.6
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 4.0e-107 392.1 275 75.3
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 5.2e-107 391.7 259 79.9
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 8.8e-107 391.0 261 78.2
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 1.5e-106 390.2 260 78.1
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 2.0e-106 389.8 261 77.8
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 2.0e-106 389.8 274 74.5
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 2.6e-106 389.4 263 77.9
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 4.4e-106 388.7 264 78.4
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 9.7e-106 387.5 301 71.1
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 1.7e-105 386.7 312 68.3
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 1.7e-105 386.7 265 78.1
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 2.8e-105 386.0 263 75.7
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 3.7e-105 385.6 266 74.8
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 4.8e-105 385.2 260 78.5
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 1.1e-104 384.0 260 76.9
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 1.4e-104 383.6 259 76.4
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 2.4e-104 382.9 278 72.7
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 2.4e-104 382.9 319 66.8
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 3.1e-104 382.5 249 79.1
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 3.1e-104 382.5 259 78.0
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 4.1e-104 382.1 261 76.6
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 7.0e-104 381.3 321 66.4
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 1.6e-103 380.2 320 66.6
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 2.0e-103 379.8 267 76.0
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 2.7e-103 379.4 281 72.6
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 2.9e-102 375.9 262 73.3
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 3.8e-102 375.6 294 69.4
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 6.5e-102 374.8 250 80.0
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 6.5e-102 374.8 323 67.2
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 5.5e-101 371.7 235 82.1
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 7.2e-101 371.3 263 73.0
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 7.2e-101 371.3 263 73.0
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 1.6e-100 370.2 261 74.7
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 2.1e-100 369.8 293 68.3
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 2.7e-100 369.4 260 74.2
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 3.6e-100 369.0 260 74.6
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 8.0e-100 367.9 345 62.6
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 1.0e-99 367.5 263 73.0
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 1.4e-99 367.1 368 59.8
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 1.8e-99 366.7 238 79.4
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 4.0e-99 365.5 318 65.4
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 2.0e-98 363.2 347 61.4
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 2.6e-98 362.8 264 74.6
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 5.7e-98 361.7 322 64.6
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 1.3e-97 360.5 259 73.7
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 1.7e-97 360.1 274 71.9
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 2.8e-97 359.4 259 74.1
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 6.3e-97 358.2 249 74.3
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 6.3e-97 358.2 262 71.8
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 1.2e-95 354.0 317 63.1
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 3.5e-95 352.4 290 67.2
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.2e-92 344.0 250 72.8
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 3.0e-91 339.3 307 62.5
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 2.0e-90 336.7 259 67.2
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 1.3e-89 334.0 279 68.5
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 7.8e-87 324.7 268 64.9
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.9e-85 320.1 221 73.8
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 1.9e-85 320.1 270 63.7
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 3.3e-85 319.3 254 67.3
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 1.8e-83 313.5 236 67.8
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 2.3e-83 313.2 228 70.6
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 4.0e-83 312.4 307 58.6
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 2.6e-82 309.7 244 73.0
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 5.4e-80 302.0 212 75.9
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 3.5e-79 299.3 216 67.1
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 8.9e-75 284.6 189 77.8
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.7e-73 280.4 203 73.4
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 4.7e-68 262.3 250 54.4
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 8.1e-68 261.5 260 53.5
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 1.1e-64 251.1 195 70.3
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 4.1e-64 249.2 270 50.4
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.8e-59 233.8 249 53.0
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 8.9e-59 231.5 251 51.0
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 6.4e-57 225.3 263 45.2
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.4e-56 224.2 253 47.0
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 1.2e-55 221.1 252 47.6
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.1e-51 208.0 129 82.9
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 5.4e-48 195.7 257 42.0
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 3.6e-44 183.0 250 45.2
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 6.0e-39 165.6 123 71.5
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 1.8e-38 164.1 246 37.8
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 4.8e-36 156.0 110 76.4
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 6.1e-23 112.5 244 27.9
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 9.7e-21 105.1 120 53.3
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 1.0e-17 95.1 235 28.9
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 7.9e-07 58.9 32 93.8


User provided reference genes

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