Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0025022 Lotus japonicus HOM05D005060 ORTHO05D005975 7.5e-69 263.8 145 100.0
Ca_08351_v3 Cicer arietinum L. HOM05D005060 ORTHO05D005975 1.9e-35 152.9 150 68.7
Psat0s2745g0280 Pisum sativum HOM05D005060 ORTHO05D005975 3.0e-33 145.6 151 64.9
TPR.G27972 Trifolium pratense HOM05D005060 ORTHO05D005975 6.7e-33 144.4 150 67.3
Lalb_Chr22g0358011 Lupinus albus HOM05D005060 ORTHO05D005975 2.8e-31 139.0 161 60.9
Lalb_Chr14g0365381 Lupinus albus HOM05D005060 ORTHO05D005975 4.8e-31 138.3 160 60.0
Lalb_Chr24g0400621 Lupinus albus HOM05D005060 ORTHO05D005975 1.1e-30 137.1 158 61.4
Medtr7g088520 Medicago truncatula HOM05D005060 ORTHO05D005975 6.4e-28 127.9 150 63.3
Phvul.001G116500 Phaseolus vulgaris HOM05D005060 ORTHO05D005975 1.4e-27 126.7 148 61.5
Glyma.19G124900 Glycine max HOM05D005060 ORTHO05D005975 2.1e-26 122.9 142 60.6
VMungo1383G0657 Vigna mungo HOM05D005060 ORTHO05D005975 2.3e-25 119.4 146 58.9
Psat3g082360 Pisum sativum HOM05D005060 ORTHO05D005975 1.9e-24 116.3 150 59.3
Glyma.03G120300 Glycine max HOM05D005060 ORTHO05D005975 3.1e-22 109.0 148 53.4
ClCG04G005980 Citrullus lanatus HOM05D005060 ORTHO05D005975 5.8e-21 104.8 156 52.6
CsaV3_4G029150 Cucumis sativus L. HOM05D005060 ORTHO05D005975 4.9e-20 101.7 141 52.5
MELO3C019148.2 Cucumis melo HOM05D005060 ORTHO05D005975 3.2e-19 99.0 145 53.1
arahy.Tifrunner.gnm1.ann1.3R5KQS Arachis hypogaea HOM05D005060 ORTHO05D005975 5.5e-19 98.2 153 51.6
Potri.016G027600 Populus trichocarpa HOM05D005060 ORTHO05D005975 5.5e-19 98.2 151 53.0
arahy.Tifrunner.gnm1.ann1.U3TF2Z Arachis hypogaea HOM05D005060 ORTHO05D005975 2.1e-18 96.3 154 52.6
Sabra16G0032200 Salix brachista HOM05D005060 ORTHO05D005975 7.9e-18 94.4 151 51.7
MD07G1060800 Malus domestica HOM05D005060 ORTHO05D005975 1.8e-17 93.2 112 56.2
Nitab4.5_0003286g0020 Nicotiana tabacum HOM05D005060 ORTHO05D005975 3.0e-17 92.4 147 49.0
Rhsim04G0118500 Rhododendron simsii HOM05D005060 ORTHO05D005975 3.9e-17 92.0 155 49.0
VMungo0331G0467 Vigna mungo HOM05D005060 ORTHO05D005975 1.5e-16 90.1 135 54.8
CAN.G128.101 Capsicum annuum HOM05D005060 ORTHO05D005975 2.5e-16 89.4 152 52.0
Cfa019938 Carpinus fangiana HOM05D005060 ORTHO05D005975 3.3e-16 89.0 116 56.0
Sed0011991 Sechium edule HOM05D005060 ORTHO05D005975 3.3e-16 89.0 154 48.1
BcaC08g44810 Brassica carinata HOM05D005060 ORTHO05D005975 1.3e-15 87.0 94 69.1
Haze_20306 Corylus avellana HOM05D005060 ORTHO05D005975 1.6e-15 86.7 133 48.1
vmacro08973 Vaccinium macrocarpon HOM05D005060 ORTHO05D005975 2.8e-15 85.9 161 44.7
PGSC0003DMG400028107 Solanum tuberosum HOM05D005060 ORTHO05D005975 3.7e-15 85.5 154 47.4
MD02G1260500 Malus domestica HOM05D005060 ORTHO05D005975 8.2e-15 84.3 97 57.7
Sopen10g031600 Solanum pennellii HOM05D005060 ORTHO05D005975 8.2e-15 84.3 154 48.1
Gohir.A13G001200 Gossypium hirsutum HOM05D005060 ORTHO05D005975 1.4e-14 83.6 151 47.0
Sabra16G0031900 Salix brachista HOM05D005060 ORTHO05D005975 1.4e-14 83.6 94 59.6
Solyc10g081100.3 Solanum lycopersicum HOM05D005060 ORTHO05D005975 1.4e-14 83.6 154 48.1
Lsat_1_v5_gn_8_109400 Lactuca sativa HOM05D005060 ORTHO05D005975 2.4e-14 82.8 142 47.2
FAN03G0591 Fragaria x ananassa HOM05D005060 ORTHO05D005975 3.1e-14 82.4 145 46.2
RcHm_v2.0_Chr1g0331611 Rosa chinensis HOM05D005060 ORTHO05D005975 6.9e-14 81.3 150 46.7
Gohir.A01G192800 Gossypium hirsutum HOM05D005060 ORTHO05D005975 1.5e-13 80.1 151 43.7
Gohir.D01G177000 Gossypium hirsutum HOM05D005060 ORTHO05D005975 1.5e-13 80.1 151 43.7
Gorai.002G226200 Gossypium raimondii HOM05D005060 ORTHO05D005975 1.5e-13 80.1 151 43.7
Thecc.05G132800 Theobroma cacao HOM05D005060 ORTHO05D005975 1.5e-13 80.1 154 46.8
AT3G56910 Arabidopsis thaliana HOM05D005060 ORTHO05D005975 2.0e-13 79.7 153 49.0
Os01g0278900 Oryza sativa ssp. japonica HOM05D005060 ORTHO05D005975 2.6e-13 79.3 95 55.8
FAN01G1650 Fragaria x ananassa HOM05D005060 ORTHO05D005975 3.4e-13 79.0 145 44.8
SGA_v2.0_scaffold66G22311 Striga asiatica HOM05D005060 ORTHO05D005975 3.4e-13 79.0 149 43.6
Atru.chr1.1520 Acer truncatum HOM05D005060 ORTHO05D005975 4.5e-13 78.6 160 46.2
CARHR167060 Cardamine hirsuta HOM05D005060 ORTHO05D005975 4.5e-13 78.6 154 46.8
FAN06G1820 Fragaria x ananassa HOM05D002241 ORTHO05D002458 1.0e-12 77.4 109 52.3
FAN10G4368 Fragaria x ananassa HOM05D002241 ORTHO05D002458 1.0e-12 77.4 143 44.8
FvH4_7g05170 Fragaria vesca HOM05D005060 ORTHO05D005975 1.3e-12 77.0 146 44.5
FAN06G0894 Fragaria x ananassa HOM05D005060 ORTHO05D005975 1.3e-12 77.0 146 44.5
A07p23120 Brassica napus HOM05D005060 ORTHO05D005975 5.0e-12 75.1 151 49.0
BcaC07g40003 Brassica carinata HOM05D005060 ORTHO05D005975 6.5e-12 74.7 154 47.4
C08p32160 Brassica napus HOM05D005060 ORTHO05D005975 6.5e-12 74.7 154 47.4
BolC8t50834H Brassica oleracea HOM05D005060 ORTHO05D005975 6.5e-12 74.7 154 47.4
PGR042G1122 Punica granatum HOM05D005060 ORTHO05D005975 6.5e-12 74.7 151 45.7
TWI53G1989 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 6.5e-12 74.7 147 42.9
A09p49780 Brassica napus HOM05D005060 ORTHO05D005975 8.5e-12 74.3 162 45.1
BraA09t40431Z Brassica rapa HOM05D005060 ORTHO05D005975 8.5e-12 74.3 162 45.1
Lj1C23T21 Lonicera japonica HOM05D005060 ORTHO05D005975 1.1e-11 73.9 90 60.0
BraA07t29972Z Brassica rapa HOM05D000531 ORTHO05D001630 1.4e-11 73.6 151 45.7
Duzib093G0151 Durio zibethinus HOM05D005060 ORTHO05D005975 1.4e-11 73.6 151 43.0
HanXRQChr05g0130501 Helianthus annuus HOM05D005060 ORTHO05D005975 1.4e-11 73.6 145 42.1
BcaC02g09878 Brassica carinata HOM05D005060 ORTHO05D005975 4.2e-11 72.0 159 45.9
C04p35630 Brassica napus HOM05D005060 ORTHO05D005975 4.2e-11 72.0 159 45.9
BolC4t25241H Brassica oleracea HOM05D005060 ORTHO05D005975 4.2e-11 72.0 159 45.9
unitig_21.g20673 Utricularia gibba HOM05D005060 ORTHO05D005975 5.5e-11 71.6 144 44.4
Potri.006G029500 Populus trichocarpa HOM05D005060 ORTHO05D005975 7.2e-11 71.2 138 42.8
Sp5g05680 Schrenkiella parvula HOM05D005060 ORTHO05D005975 7.2e-11 71.2 163 43.6
Nitab4.5_0000062g0300 Nicotiana tabacum HOM05D005060 ORTHO05D005975 9.4e-11 70.9 147 42.9
Actinidia05489 Actinidia chinensis HOM05D005060 ORTHO05D005975 1.6e-10 70.1 43 90.7
Eucgr.A02181 Eucalyptus grandis HOM05D005060 ORTHO05D005975 1.6e-10 70.1 151 44.4
Prupe.2G065900 Prunus persica HOM05D005060 ORTHO05D005975 6.1e-10 68.2 155 44.5
BcaB02g08343 Brassica carinata HOM05D005060 ORTHO05D005975 7.9e-10 67.8 149 45.6
Ciclev10013047m.g Citrus clementina HOM05D005060 ORTHO05D005975 7.9e-10 67.8 150 41.3
Haze_20302 Corylus avellana HOM05D005060 ORTHO05D005975 1.8e-09 66.6 69 60.9
A04p03610 Brassica napus HOM05D005060 ORTHO05D005975 8.8e-09 64.3 154 42.9
Cpa.g.sc33.199 Carica papaya HOM05D005060 ORTHO05D005975 1.1e-08 63.9 149 40.9
DCAR_009091 Daucus carota HOM05D005060 ORTHO05D005975 4.3e-08 62.0 153 39.9
PSO339G2385 Papaver somniferum HOM05D005060 ORTHO05D005975 5.7e-08 61.6 148 42.6
Manes.08G066600 Manihot esculenta HOM05D005060 ORTHO05D005975 7.4e-08 61.2 131 37.4
QL07p014517 Quercus lobata HOM05D005060 ORTHO05D005975 9.7e-08 60.8 69 52.2
PSO384G0259 Papaver somniferum HOM05D005060 ORTHO05D005975 1.3e-07 60.5 156 40.4
Carub.0005s2365 Capsella rubella HOM05D005060 ORTHO05D005975 1.7e-07 60.1 156 42.9
AL5G38310 Arabidopsis lyrata HOM05D005060 ORTHO05D005975 8.2e-07 57.8 156 42.3
TAR369G0553 Trochodendron aralioides HOM05D005060 ORTHO05D005975 8.2e-07 57.8 138 41.3
Ah.04g150220 Amaranthus hybridus HOM05D005060 ORTHO05D005975 1.1e-06 57.4 123 40.7
Sc13g0000780 Simmondsia chinensis HOM05D005060 ORTHO05D005975 1.8e-06 56.6 124 44.4
Duzib128G1851 Durio zibethinus HOM05D005060 ORTHO05D005975 2.4e-06 56.2 151 37.7
Nn7g37114 Nelumbo nucifera HOM05D005060 ORTHO05D005975 2.4e-06 56.2 148 39.9
Peaxi162Scf00153g01321 Petunia axillaris HOM05D005060 ORTHO05D005975 4.1e-06 55.5 148 41.2
Potri.006G028500 Populus trichocarpa HOM05D005060 ORTHO05D005975 4.1e-06 55.5 138 39.1
unitig_744.g24164 Utricularia gibba HOM05D003084 ORTHO05D003580 4.1e-06 55.5 49 67.3
TWI74G0004 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 5.3e-06 55.1 153 39.2
Ah.13g077380 Amaranthus hybridus HOM05D005060 ORTHO05D005975 6.9e-06 54.7 75 50.7


User provided reference genes

Program Settings