Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0024522 Lotus japonicus HOM05D007728 ORTHO05D009681 3.1e-170 601.7 292 100.0
Lj2g0021840 Lotus japonicus HOM05D007728 ORTHO05D009681 9.5e-79 297.7 277 56.7
Lj1g0008845 Lotus japonicus HOM05D002252 ORTHO05D002451 1.7e-56 223.8 236 47.0
Lj4g0000724 Lotus japonicus HOM05D002252 ORTHO05D002451 1.7e-56 223.8 236 47.0
Lj6g0010635 Lotus japonicus HOM05D007728 ORTHO05D009681 1.6e-54 217.2 214 50.9
Lj4g0000914 Lotus japonicus HOM05D007728 ORTHO05D009681 1.1e-53 214.5 247 47.8
Lj4g0017512 Lotus japonicus HOM05D007728 ORTHO05D009681 1.5e-52 210.7 214 50.0
Lj5g0008262 Lotus japonicus HOM05D007728 ORTHO05D009681 2.2e-35 153.7 251 33.1
Lj5g0026008 Lotus japonicus HOM05D016573 ORTHO05D009681 2.2e-35 153.7 215 35.3
Lj6g0011981 Lotus japonicus HOM05D007728 ORTHO05D009681 1.6e-33 147.5 246 32.5
Lj2g0007737 Lotus japonicus HOM05D007728 ORTHO05D009681 3.5e-33 146.4 257 31.9
Medtr5g023720 Medicago truncatula HOM05D007728 ORTHO05D009681 3.5e-33 146.4 238 32.4
Lj6g0022050 Lotus japonicus HOM05D007728 ORTHO05D009681 1.1e-31 141.4 250 33.2
Lj1g0027806 Lotus japonicus HOM05D007728 ORTHO05D009681 1.8e-29 134.0 255 32.5
Lj5g0019189 Lotus japonicus HOM05D007728 ORTHO05D009681 1.5e-28 131.0 231 33.8
Medtr1g070355 Medicago truncatula HOM05D000045 ORTHO05D007522 4.5e-28 129.4 205 32.7
TPR.G2699 Trifolium pratense HOM05D000045 ORTHO05D000067 4.5e-28 129.4 189 34.9
Lj3g0004344 Lotus japonicus HOM05D007728 ORTHO05D009681 9.9e-28 128.3 249 31.7
Lj3g0005611 Lotus japonicus HOM05D007728 ORTHO05D009681 4.9e-27 125.9 204 33.3
Lj4g0015611 Lotus japonicus HOM05D007728 ORTHO05D009681 8.4e-27 125.2 177 37.3
Lj4g0007695 Lotus japonicus HOM05D007728 ORTHO05D009681 1.9e-26 124.0 171 35.7
Lj1g0018604 Lotus japonicus HOM05D007728 ORTHO05D009681 2.4e-26 123.6 218 31.7
Lj4g0006061 Lotus japonicus HOM05D007728 ORTHO05D009681 3.2e-26 123.2 245 27.3
Lj6g0019939 Lotus japonicus HOM05D007728 ORTHO05D009681 5.5e-26 122.5 208 33.7
Lj4g0018110 Lotus japonicus HOM05D007728 ORTHO05D009681 9.3e-26 121.7 187 34.8
Lj6g0005096 Lotus japonicus HOM05D016573 ORTHO05D009681 3.5e-25 119.8 107 53.3
LjContig00357g0010761 Lotus japonicus HOM05D007728 ORTHO05D009681 6.0e-25 119.0 204 30.9
Lj3g0006822 Lotus japonicus HOM05D040744 ORTHO05D009681 7.9e-25 118.6 210 31.9
Lj6g0022916 Lotus japonicus HOM05D007728 ORTHO05D009681 7.9e-25 118.6 185 30.3
Lj6g0001515 Lotus japonicus HOM05D007728 ORTHO05D009681 2.3e-24 117.1 204 31.4
Lj3g0019926 Lotus japonicus HOM05D007728 ORTHO05D009681 3.0e-24 116.7 212 28.8
Medtr6g471840 Medicago truncatula HOM05D007728 ORTHO05D009681 1.1e-23 114.8 187 32.1
Lj1g0027147 Lotus japonicus HOM05D007728 ORTHO05D009681 7.4e-23 112.1 204 31.4
Lj4g0006777 Lotus japonicus HOM05D007728 ORTHO05D009681 1.3e-22 111.3 212 28.3
arahy.Tifrunner.gnm1.ann1.K8WX4Q Arachis hypogaea HOM05D014551 ORTHO05D009681 2.1e-22 110.5 221 29.9
arahy.Tifrunner.gnm1.ann1.F05QJ0 Arachis hypogaea HOM05D000023 ORTHO05D000014 6.2e-22 109.0 245 31.4
Lj1g0001720 Lotus japonicus HOM05D007728 ORTHO05D009681 1.1e-21 108.2 176 32.4
Lj4g0027426 Lotus japonicus HOM05D007728 ORTHO05D009681 4.0e-21 106.3 162 35.8
Lj3g0016118 Lotus japonicus HOM05D007728 ORTHO05D009681 6.9e-21 105.5 208 31.7
Lj5g0007568 Lotus japonicus HOM05D007728 ORTHO05D009681 9.0e-21 105.1 163 33.1
arahy.Tifrunner.gnm1.ann1.F1MI29 Arachis hypogaea HOM05D008607 ORTHO05D010784 1.2e-20 104.8 265 26.0
Lj4g0011622 Lotus japonicus HOM05D016573 ORTHO05D009681 2.6e-20 103.6 126 35.7
Medtr3g023970 Medicago truncatula HOM05D007728 ORTHO05D022933 2.6e-20 103.6 182 29.7
Lj4g0019282 Lotus japonicus HOM05D007728 ORTHO05D009681 1.3e-19 101.3 207 30.4
arahy.Tifrunner.gnm1.ann1.CYJA9T Arachis hypogaea HOM05D007728 ORTHO05D009681 4.9e-19 99.4 199 26.6
Lj1g0007911 Lotus japonicus HOM05D007728 ORTHO05D009681 6.5e-19 99.0 163 30.7
TPR.G37581 Trifolium pratense HOM05D007728 ORTHO05D009681 2.1e-17 94.0 217 28.1
Lj3g0002464 Lotus japonicus HOM05D007728 ORTHO05D009681 1.0e-16 91.7 195 28.2
arahy.Tifrunner.gnm1.ann1.FLR77E Arachis hypogaea HOM05D007728 ORTHO05D021507 1.3e-16 91.3 223 28.3
arahy.Tifrunner.gnm1.ann1.NMLT85 Arachis hypogaea HOM05D007728 ORTHO05D021507 3.9e-16 89.7 156 31.4
arahy.Tifrunner.gnm1.ann1.26YFK1 Arachis hypogaea HOM05D007728 ORTHO05D021507 5.1e-16 89.4 156 31.4
Medtr0268s0040 Medicago truncatula HOM05D035021 ORTHO05D022933 5.1e-16 89.4 126 34.9
Lj4g0000181 Lotus japonicus HOM05D007728 ORTHO05D009681 6.7e-16 89.0 144 33.3
Lj4g0001150 Lotus japonicus HOM05D007728 ORTHO05D009681 6.7e-16 89.0 144 33.3
Lj4g0023843 Lotus japonicus HOM05D007728 ORTHO05D009681 6.7e-16 89.0 144 33.3
Lj4g0022567 Lotus japonicus HOM05D007728 ORTHO05D009681 8.7e-16 88.6 144 33.3
arahy.Tifrunner.gnm1.ann1.AR083C Arachis hypogaea HOM05D038934 ORTHO05D021507 3.3e-15 86.7 191 28.3
arahy.Tifrunner.gnm1.ann1.UYMN7S Arachis hypogaea HOM05D008607 ORTHO05D010784 3.3e-15 86.7 262 24.4
Lj1g0003216 Lotus japonicus HOM05D007728 ORTHO05D009681 4.3e-15 86.3 207 26.1
arahy.Tifrunner.gnm1.ann1.8HM2EW Arachis hypogaea HOM05D008607 ORTHO05D010784 7.4e-15 85.5 265 24.5
arahy.Tifrunner.gnm1.ann1.WZZH7X Arachis hypogaea HOM05D008607 ORTHO05D010784 7.4e-15 85.5 265 24.5
TPR.G27876 Trifolium pratense HOM05D061328 ORTHO05D022933 1.6e-14 84.3 134 34.3
arahy.Tifrunner.gnm1.ann1.D9VETH Arachis hypogaea HOM05D008607 ORTHO05D010784 4.8e-14 82.8 224 24.6
arahy.Tifrunner.gnm1.ann1.WWA99J Arachis hypogaea HOM05D008607 ORTHO05D010784 6.3e-14 82.4 247 24.7
arahy.Tifrunner.gnm1.ann1.9R8PUV Arachis hypogaea HOM05D008607 ORTHO05D010784 2.4e-13 80.5 262 24.8
Medtr5g054010 Medicago truncatula HOM05D035021 ORTHO05D022933 2.4e-13 80.5 126 34.1
Lj5g0002603 Lotus japonicus HOM05D016573 ORTHO05D236871 1.7e-11 74.3 84 36.9
Medtr6g045620 Medicago truncatula HOM05D007728 ORTHO05D010784 1.7e-11 74.3 176 28.4
arahy.Tifrunner.gnm1.ann1.N9YQYJ Arachis hypogaea HOM05D008645 ORTHO05D007788 6.5e-11 72.4 152 29.6
arahy.Tifrunner.gnm1.ann1.LVQ59A Arachis hypogaea HOM05D008607 ORTHO05D010784 1.1e-10 71.6 240 23.3
arahy.Tifrunner.gnm1.ann1.63191C Arachis hypogaea HOM05D014551 ORTHO05D009681 1.4e-10 71.2 161 28.6
arahy.Tifrunner.gnm1.ann1.IPN40Q Arachis hypogaea HOM05D008607 ORTHO05D010784 7.2e-10 68.9 201 24.4
arahy.Tifrunner.gnm1.ann1.LCEB5E Arachis hypogaea HOM05D009036 ORTHO05D011872 9.3e-10 68.6 214 23.4
Lj5g0022558 Lotus japonicus HOM05D036966 ORTHO05D236660 9.3e-10 68.6 67 50.7
TPR.G35664 Trifolium pratense HOM05D007728 ORTHO05D025857 9.3e-10 68.6 93 36.6
arahy.Tifrunner.gnm1.ann1.2QX347 Arachis hypogaea HOM05D009036 ORTHO05D011872 1.2e-09 68.2 214 23.4
arahy.Tifrunner.gnm1.ann1.E81N8H Arachis hypogaea HOM05D009036 ORTHO05D011872 6.1e-09 65.9 141 25.5
arahy.Tifrunner.gnm1.ann1.RSA1RP Arachis hypogaea HOM05D008645 ORTHO05D007788 1.3e-08 64.7 143 30.1
Medtr2g022080 Medicago truncatula HOM05D009725 ORTHO05D007788 1.8e-08 64.3 197 27.4
Lj1g0023634 Lotus japonicus HOM05D007728 ORTHO05D009681 2.3e-08 63.9 214 23.8
Lj3g0020615 Lotus japonicus HOM05D016573 ORTHO05D235913 2.3e-08 63.9 69 37.7
Lj1g0006672 Lotus japonicus HOM05D007728 ORTHO05D009681 3.0e-08 63.5 95 35.8
arahy.Tifrunner.gnm1.ann1.5WRS92 Arachis hypogaea HOM05D008645 ORTHO05D007788 5.1e-08 62.8 180 26.1
arahy.Tifrunner.gnm1.ann1.D6JZRQ Arachis hypogaea HOM05D008645 ORTHO05D007788 8.7e-08 62.0 165 27.3
Lj5g0015857 Lotus japonicus HOM05D009725 ORTHO05D007788 8.7e-08 62.0 191 25.7
arahy.Tifrunner.gnm1.ann1.6ZP1HE Arachis hypogaea HOM05D007728 ORTHO05D021507 1.1e-07 61.6 114 31.6
arahy.Tifrunner.gnm1.ann1.6QZ6Z8 Arachis hypogaea HOM05D014551 ORTHO05D009681 1.5e-07 61.2 145 27.6
Medtr5g022270 Medicago truncatula HOM05D009725 ORTHO05D007788 1.5e-07 61.2 185 27.6
TPR.G39856 Trifolium pratense HOM05D007728 ORTHO05D025857 1.5e-07 61.2 128 30.5
Lj4g0023855 Lotus japonicus HOM05D007728 ORTHO05D009681 3.3e-07 60.1 113 29.2
Ciclev10020105m.g Citrus clementina HOM05D002639 ORTHO05D010823 7.4e-07 58.9 224 24.1
Lj2g0027504 Lotus japonicus HOM05D009725 ORTHO05D007788 7.4e-07 58.9 165 27.3
arahy.Tifrunner.gnm1.ann1.39PF62 Arachis hypogaea HOM05D027585 ORTHO05D007788 9.7e-07 58.5 145 29.7


User provided reference genes

Program Settings