Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 1.1e-150 536.6 264 100.0
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 5.5e-94 348.2 268 68.3
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 1.2e-93 347.1 271 67.5
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 8.0e-93 344.4 268 68.3
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 1.0e-92 344.0 268 68.3
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 3.0e-92 342.4 271 66.1
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 2.2e-90 336.3 265 67.2
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 4.8e-90 335.1 270 65.2
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 1.6e-88 330.1 268 66.0
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 2.7e-88 329.3 269 66.2
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 1.7e-87 326.6 269 65.8
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 2.5e-86 322.8 275 62.2
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 4.2e-86 322.0 269 65.8
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 8.6e-71 271.2 256 58.6
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 8.0e-69 264.6 272 51.5
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 1.3e-66 257.3 215 58.6
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 2.9e-66 256.1 272 51.5
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 2.9e-66 256.1 272 51.5
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 3.7e-66 255.8 270 51.9
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 1.1e-65 254.2 270 49.6
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 4.1e-65 252.3 218 57.3
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 5.4e-65 251.9 239 53.1
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 7.0e-65 251.5 272 49.3
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 7.0e-65 251.5 202 61.4
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 2.0e-64 250.0 212 56.1
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 2.7e-64 249.6 215 57.7
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 7.8e-64 248.1 278 50.4
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 1.0e-63 247.7 208 59.1
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 1.0e-63 247.7 207 56.5
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 1.3e-63 247.3 272 51.8
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 1.3e-63 247.3 266 48.1
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 1.7e-63 246.9 266 48.9
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 2.3e-63 246.5 207 55.6
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 2.3e-63 246.5 207 56.0
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 3.0e-63 246.1 267 50.9
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 3.0e-63 246.1 226 57.1
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 3.9e-63 245.7 250 52.0
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 5.0e-63 245.4 275 51.6
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 8.6e-63 244.6 243 52.7
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 1.9e-62 243.4 235 55.3
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 3.3e-62 242.7 234 60.7
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 4.3e-62 242.3 195 60.0
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 4.3e-62 242.3 275 49.1
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 5.6e-62 241.9 233 54.9
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 7.3e-62 241.5 237 51.1
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 7.3e-62 241.5 218 54.1
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 7.3e-62 241.5 230 56.5
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 1.2e-61 240.7 220 54.5
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 1.2e-61 240.7 220 55.0
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 1.2e-61 240.7 209 58.4
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 2.8e-61 239.6 270 50.4
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 3.6e-61 239.2 202 58.4
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 4.7e-61 238.8 202 56.9
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 4.7e-61 238.8 220 55.0
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 6.2e-61 238.4 281 50.9
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 8.1e-61 238.0 271 49.1
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 1.1e-60 237.7 249 51.0
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 1.4e-60 237.3 202 58.4
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 1.8e-60 236.9 267 49.4
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 2.3e-60 236.5 200 58.0
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 2.3e-60 236.5 186 61.8
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 4.0e-60 235.7 283 47.7
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 4.0e-60 235.7 220 53.6
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 4.0e-60 235.7 245 51.4
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 6.8e-60 235.0 198 58.1
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 2.0e-59 233.4 197 58.4
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 1.7e-58 230.3 200 54.5
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 2.9e-58 229.6 238 50.8
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 2.9e-58 229.6 276 47.1
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 3.7e-58 229.2 262 48.1
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 1.1e-57 227.6 190 58.9
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 1.1e-57 227.6 202 55.4
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 1.9e-57 226.9 261 48.7
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 1.9e-57 226.9 224 52.2
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 3.2e-57 226.1 256 48.8
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 7.1e-57 224.9 258 47.3
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 2.7e-56 223.0 201 56.2
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 2.7e-56 223.0 201 56.2
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 2.7e-56 223.0 218 51.8
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 2.7e-56 223.0 218 51.8
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 2.7e-56 223.0 268 47.4
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 3.5e-56 222.6 224 51.8
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 3.5e-56 222.6 224 51.8
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 3.5e-56 222.6 224 51.8
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 7.8e-56 221.5 249 48.2
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 7.8e-56 221.5 239 49.0
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 1.3e-55 220.7 247 49.8
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 2.3e-55 219.9 218 51.4
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 2.3e-55 219.9 204 52.9
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 3.0e-55 219.5 218 50.9
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 3.9e-55 219.2 243 49.4
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 7.3e-54 214.9 213 50.7
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 3.6e-53 212.6 217 49.3
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 1.1e-52 211.1 194 53.1
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 5.8e-51 205.3 238 45.8
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 3.2e-49 199.5 191 50.3
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 3.3e-46 189.5 201 50.7
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 2.8e-45 186.4 224 42.0
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 6.2e-45 185.3 224 42.0
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 3.2e-41 172.9 206 48.5
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 1.4e-36 157.5 228 40.4
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 3.1e-36 156.4 148 53.4
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 9.0e-36 154.8 157 47.8
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 7.1e-33 145.2 183 47.5
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 1.1e-30 137.9 257 35.4
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 3.1e-28 129.8 141 47.5
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 1.1e-25 121.3 76 78.9
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 1.3e-23 114.4 167 35.9
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 1.1e-22 111.3 162 38.3
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 2.5e-17 93.6 185 35.7
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 3.5e-16 89.7 198 32.3
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 6.0e-16 89.0 206 30.6
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 1.6e-13 80.9 61 60.7
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.2e-11 74.7 63 52.4
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 5.1e-07 59.3 64 54.7
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 2.5e-06 57.0 64 53.1


User provided reference genes

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