Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0023170 Lotus japonicus HOM05D006550 ORTHO05D008630 2.3e-67 258.8 140 100.0
Lj3g0003228 Lotus japonicus HOM05D006550 ORTHO05D008630 5.8e-34 147.9 149 60.4
CARHR054710 Cardamine hirsuta HOM05D006550 ORTHO05D008630 3.0e-30 135.6 125 61.6
CARHR052930 Cardamine hirsuta HOM05D006550 ORTHO05D008630 1.9e-29 132.9 125 60.8
Lj3g0014744 Lotus japonicus HOM05D006550 ORTHO05D008630 3.3e-29 132.1 146 55.5
AL8G18760 Arabidopsis lyrata HOM05D006550 ORTHO05D008630 4.3e-29 131.7 125 56.8
Lj2g0009425 Lotus japonicus HOM05D006550 ORTHO05D008630 2.8e-28 129.0 144 53.5
Lj3g0017791 Lotus japonicus HOM05D006550 ORTHO05D008630 3.6e-28 128.6 146 54.1
Lj2g0024473 Lotus japonicus HOM05D006550 ORTHO05D008630 3.1e-27 125.6 144 52.1
Lj3g0008820 Lotus japonicus HOM05D006550 ORTHO05D008630 6.9e-27 124.4 146 53.4
Lj4g0022286 Lotus japonicus HOM05D006550 ORTHO05D008630 6.9e-27 124.4 146 53.4
AL3G47380 Arabidopsis lyrata HOM05D006550 ORTHO05D008630 3.4e-26 122.1 174 45.4
AT2G10975 Arabidopsis thaliana HOM05D006550 ORTHO05D008630 1.7e-25 119.8 154 52.6
Medtr3g053390 Medicago truncatula HOM05D006550 ORTHO05D008630 9.3e-24 114.0 142 50.7
Medtr4g046090 Medicago truncatula HOM05D006550 ORTHO05D008630 1.0e-22 110.5 127 53.5
Medtr1g106885 Medicago truncatula HOM05D006550 ORTHO05D008630 8.7e-22 107.5 155 45.8
Medtr2g022120 Medicago truncatula HOM05D006550 ORTHO05D008630 8.7e-22 107.5 155 45.8
Medtr3g067785 Medicago truncatula HOM05D006550 ORTHO05D008630 8.7e-22 107.5 155 45.8
Medtr4g013220 Medicago truncatula HOM05D006550 ORTHO05D008630 8.7e-22 107.5 155 45.8
Medtr4g026120 Medicago truncatula HOM05D006550 ORTHO05D008630 8.7e-22 107.5 155 45.8
Medtr4g036435 Medicago truncatula HOM05D006550 ORTHO05D008630 8.7e-22 107.5 155 45.8
Medtr1g100375 Medicago truncatula HOM05D006550 ORTHO05D008630 1.5e-21 106.7 155 45.2
Medtr1g471070 Medicago truncatula HOM05D006550 ORTHO05D008630 1.5e-21 106.7 155 45.2
Medtr2g072860 Medicago truncatula HOM05D006550 ORTHO05D008630 1.5e-21 106.7 155 45.2
Medtr3g450670 Medicago truncatula HOM05D006550 ORTHO05D008630 1.5e-21 106.7 155 45.2
Medtr3g464170 Medicago truncatula HOM05D006550 ORTHO05D008630 1.5e-21 106.7 155 45.2
Medtr6g051405 Medicago truncatula HOM05D006550 ORTHO05D008630 1.5e-21 106.7 155 45.2
Medtr3g093185 Medicago truncatula HOM05D006550 ORTHO05D008630 3.3e-21 105.5 170 44.1
Medtr5g066280 Medicago truncatula HOM05D006550 ORTHO05D008630 4.3e-21 105.1 155 45.2
Medtr5g077245 Medicago truncatula HOM05D006550 ORTHO05D008630 5.6e-21 104.8 155 45.2
Medtr7g062380 Medicago truncatula HOM05D006550 ORTHO05D008630 2.1e-20 102.8 155 44.5
CARHR121700 Cardamine hirsuta HOM05D006550 ORTHO05D008630 4.8e-20 101.7 72 70.8
Medtr1240s0010 Medicago truncatula HOM05D006550 ORTHO05D008630 2.4e-19 99.4 148 45.3
Medtr8g045460 Medicago truncatula HOM05D006550 ORTHO05D008630 6.9e-19 97.8 121 50.4
Medtr7g072210 Medicago truncatula HOM05D006550 ORTHO05D008630 9.0e-19 97.4 146 44.5
CARHR154020 Cardamine hirsuta HOM05D006550 ORTHO05D008630 3.4e-18 95.5 141 45.4
Medtr3g464310 Medicago truncatula HOM05D006550 ORTHO05D008630 3.4e-18 95.5 143 44.1
Medtr6g016670 Medicago truncatula HOM05D006550 ORTHO05D008630 3.4e-18 95.5 143 44.1
Medtr6g453050 Medicago truncatula HOM05D006550 ORTHO05D008630 3.4e-18 95.5 146 45.2
Medtr7g461350 Medicago truncatula HOM05D006550 ORTHO05D008630 3.4e-18 95.5 143 44.1
Medtr1g075060 Medicago truncatula HOM05D006550 ORTHO05D008630 1.7e-17 93.2 146 43.2
Medtr7g083520 Medicago truncatula HOM05D006550 ORTHO05D008630 6.5e-17 91.3 146 43.2
Medtr3g464850 Medicago truncatula HOM05D006550 ORTHO05D008630 1.1e-16 90.5 131 46.6
CARHR104360 Cardamine hirsuta HOM05D006550 ORTHO05D008630 4.2e-16 88.6 70 64.3
Medtr0004s0260 Medicago truncatula HOM05D006550 ORTHO05D008630 2.7e-15 85.9 131 45.0
TPR.G28141 Trifolium pratense HOM05D006550 ORTHO05D008630 3.5e-15 85.5 147 38.8
Medtr1g048350 Medicago truncatula HOM05D006550 ORTHO05D008630 1.0e-14 84.0 74 60.8
Medtr6g092533 Medicago truncatula HOM05D006550 ORTHO05D008630 3.0e-14 82.4 155 40.0
Medtr1g046830 Medicago truncatula HOM05D006550 ORTHO05D008630 8.7e-14 80.9 115 46.1
CARHR216890 Cardamine hirsuta HOM05D006550 ORTHO05D008630 1.5e-13 80.1 80 58.8
TPR.G22538 Trifolium pratense HOM05D006550 ORTHO05D008630 1.5e-13 80.1 74 56.8
Medtr3g110230 Medicago truncatula HOM05D006550 ORTHO05D008630 4.3e-13 78.6 137 40.9
Medtr3g074670 Medicago truncatula HOM05D006550 ORTHO05D008630 6.3e-12 74.7 120 44.2
BraA08t32469Z Brassica rapa HOM05D012033 ORTHO05D012798 1.1e-11 73.9 70 58.6
A08p04420 Brassica napus HOM05D012033 ORTHO05D012798 6.9e-11 71.2 59 62.7
Medtr1g106935 Medicago truncatula HOM05D006550 ORTHO05D008630 6.9e-11 71.2 125 43.2
Medtr1g101850 Medicago truncatula HOM05D006550 ORTHO05D008630 4.5e-10 68.6 118 44.9
Medtr0007s0250 Medicago truncatula HOM05D006550 ORTHO05D008630 1.0e-09 67.4 48 70.8
Medtr3g068050 Medicago truncatula HOM05D006550 ORTHO05D008630 2.2e-09 66.2 74 50.0
Medtr1g086750 Medicago truncatula HOM05D006550 ORTHO05D008630 1.1e-08 63.9 96 44.8
Medtr2g014785 Medicago truncatula HOM05D006550 ORTHO05D008630 3.2e-08 62.4 115 40.9
AT3G29637 Arabidopsis thaliana HOM05D006550 ORTHO05D008630 2.1e-07 59.7 57 59.6
Medtr0658s0020 Medicago truncatula HOM05D006550 ORTHO05D008630 7.9e-07 57.8 61 55.7
AT1G36675 Arabidopsis thaliana HOM05D006550 ORTHO05D008630 1.0e-06 57.4 43 72.1
AL4G19930 Arabidopsis lyrata HOM05D006550 ORTHO05D012798 1.3e-06 57.0 48 60.4
CARHR216860 Cardamine hirsuta HOM05D006550 ORTHO05D008630 1.3e-06 57.0 40 77.5
Medtr1g047150 Medicago truncatula HOM05D006550 ORTHO05D008630 1.3e-06 57.0 101 41.6
Medtr6g069240 Medicago truncatula HOM05D006550 ORTHO05D008630 2.3e-06 56.2 91 41.8
Medtr1g026240 Medicago truncatula HOM05D006550 ORTHO05D008630 6.7e-06 54.7 109 40.4
Psat0s567g0040 Pisum sativum HOM05D006550 ORTHO05D008630 8.7e-06 54.3 47 68.1


User provided reference genes

Program Settings