Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 2.0e-236 822.0 396 100.0
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 6.4e-195 684.1 396 83.8
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 6.4e-195 684.1 396 83.8
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 1.7e-192 676.0 396 82.8
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 1.1e-191 673.3 396 82.6
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 4.3e-191 671.4 391 82.9
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 9.5e-191 670.2 391 82.6
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 1.6e-190 669.5 396 82.6
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 1.6e-190 669.5 396 82.3
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 1.6e-190 669.5 396 82.1
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 1.2e-188 663.3 396 81.3
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 3.4e-188 661.8 396 81.6
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 5.8e-188 661.0 394 82.0
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 7.5e-188 660.6 396 80.6
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 9.9e-188 660.2 396 79.8
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 9.9e-188 660.2 396 80.3
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 1.3e-187 659.8 396 80.1
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 2.2e-187 659.1 394 80.5
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 2.9e-187 658.7 396 79.8
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 8.3e-187 657.1 396 80.3
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.1e-186 656.8 392 80.1
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 4.1e-186 654.8 396 80.1
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 5.4e-186 654.4 396 79.5
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 2.1e-185 652.5 393 80.4
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 2.7e-185 652.1 396 80.1
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 3.5e-185 651.7 396 79.0
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 4.6e-185 651.4 396 80.3
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 6.0e-185 651.0 396 78.8
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 7.8e-185 650.6 396 79.0
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 1.7e-184 649.4 396 79.5
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 3.0e-184 648.7 392 79.1
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 5.1e-184 647.9 394 79.2
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 5.1e-184 647.9 396 79.3
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 2.5e-183 645.6 396 78.0
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 4.3e-183 644.8 396 77.8
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 4.3e-183 644.8 396 77.5
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 4.3e-183 644.8 392 78.3
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 5.6e-183 644.4 392 78.6
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 5.6e-183 644.4 397 78.8
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 7.3e-183 644.0 396 78.3
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 1.2e-182 643.3 394 77.7
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 1.6e-182 642.9 396 77.0
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 8.1e-182 640.6 396 77.3
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 8.1e-182 640.6 396 76.8
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 1.8e-181 639.4 422 74.6
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 1.8e-181 639.4 396 78.3
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 6.8e-181 637.5 395 79.0
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 6.8e-181 637.5 396 77.0
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 8.9e-181 637.1 395 78.7
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 8.9e-181 637.1 395 78.7
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 2.0e-180 636.0 396 77.3
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 2.6e-180 635.6 406 76.6
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 3.4e-180 635.2 395 78.5
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 4.4e-180 634.8 393 77.9
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 5.8e-180 634.4 393 77.6
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 5.8e-180 634.4 452 71.5
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 2.9e-179 632.1 393 77.4
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 2.9e-179 632.1 395 78.5
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 2.9e-179 632.1 395 78.2
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 3.8e-179 631.7 396 76.5
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 4.9e-179 631.3 393 77.9
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 8.4e-179 630.6 397 76.8
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 1.1e-178 630.2 396 76.5
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 9.2e-178 627.1 395 76.7
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 1.6e-177 626.3 463 68.9
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 1.6e-177 626.3 394 75.6
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 1.3e-176 623.2 421 72.4
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 1.3e-176 623.2 396 75.5
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 3.0e-176 622.1 374 79.7
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 6.6e-176 620.9 396 74.7
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 8.7e-176 620.5 396 75.8
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 1.1e-175 620.2 393 76.1
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 1.1e-175 620.2 393 76.1
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 1.1e-175 620.2 393 76.1
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 1.5e-175 619.8 393 75.8
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 1.2e-174 616.7 393 75.6
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 2.1e-174 615.9 393 75.3
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 2.1e-174 615.9 396 74.7
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 1.4e-173 613.2 392 74.0
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 1.8e-173 612.8 395 74.7
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 1.2e-172 610.1 395 73.4
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 4.9e-171 604.7 436 68.8
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 8.4e-171 604.0 392 73.2
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 1.9e-170 602.8 393 74.6
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 1.9e-170 602.8 392 73.0
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 7.1e-170 600.9 393 74.3
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 9.3e-170 600.5 393 74.3
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 9.3e-170 600.5 393 74.3
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 4.6e-169 598.2 393 74.0
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 2.3e-168 595.9 395 73.7
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 2.1e-161 572.8 392 72.2
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 2.1e-161 572.8 349 79.9
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 6.0e-161 571.2 401 67.1
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 7.9e-161 570.9 401 67.6
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 4.0e-157 558.5 392 68.9
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 7.6e-156 554.3 370 73.0
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 1.3e-155 553.5 396 68.9
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 2.5e-151 539.3 337 78.6
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 1.5e-148 530.0 349 73.9
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 1.0e-147 527.3 341 76.5
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 8.2e-142 507.7 392 63.0
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 1.1e-141 507.3 438 60.3
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 2.6e-140 502.7 392 63.8
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 2.2e-139 499.6 394 62.4
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 2.5e-138 496.1 387 65.9
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 9.7e-135 484.2 394 61.7
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 1.4e-128 463.8 288 79.5
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.8e-128 463.4 394 61.7
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 1.3e-126 457.2 396 61.1
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 3.5e-124 449.1 275 81.1
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 1.0e-123 447.6 403 57.1
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 5.7e-111 405.2 274 73.4
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 5.5e-106 388.7 204 89.2
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 2.7e-100 369.8 246 72.4
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 2.9e-78 296.6 180 80.6
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 1.2e-68 264.6 169 71.0
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 5.8e-63 245.7 155 74.2
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 6.9e-56 222.2 126 81.0
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 2.2e-54 217.2 119 79.0
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 1.3e-49 201.4 207 53.6
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 1.0e-43 181.8 357 35.6
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 4.5e-39 166.4 98 83.7
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 2.5e-29 134.0 152 52.0
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 6.1e-28 129.4 59 96.6
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 1.5e-26 124.8 111 59.5
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 2.2e-17 94.4 51 82.4
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 3.7e-17 93.6 162 38.9
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 1.5e-15 88.2 114 46.5
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 2.9e-14 84.0 37 94.6


User provided reference genes

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