Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0021910 Lotus japonicus HOM05D016095 ORTHO05D001848 3.3e-128 461.8 251 100.0
Glyma.06G089300 Glycine max HOM05D016095 ORTHO05D029748 4.4e-40 169.1 262 54.2
Lalb_Chr11g0064641 Lupinus albus HOM05D016095 ORTHO05D001848 5.4e-30 135.6 187 46.5
TPR.G12334 Trifolium pratense HOM05D016095 ORTHO05D001848 6.3e-23 112.1 157 51.0
VMungo1309G0933 Vigna mungo HOM05D016095 ORTHO05D029748 1.2e-18 97.8 218 45.9
Sabra02G0089100 Salix brachista HOM05D002243 ORTHO05D001848 2.1e-18 97.1 222 35.1
CiPaw.07G201100 Carya illinoinensis HOM05D002243 ORTHO05D001848 3.0e-17 93.2 246 37.0
CiPaw.08G028200 Carya illinoinensis HOM05D002243 ORTHO05D001848 2.0e-16 90.5 243 37.9
Psat0s3779g0120 Pisum sativum HOM05D016095 ORTHO05D001848 3.4e-16 89.7 169 43.2
Haze_21939 Corylus avellana HOM05D002243 ORTHO05D001848 4.4e-16 89.4 242 34.7
MD15G1395300 Malus domestica HOM05D002243 ORTHO05D001848 4.4e-16 89.4 211 39.3
Cfa013396 Carpinus fangiana HOM05D002243 ORTHO05D001848 1.6e-13 80.9 244 33.6
Prupe.1G544100 Prunus persica HOM05D002243 ORTHO05D001848 2.0e-13 80.5 220 34.1
Medtr3g110590 Medicago truncatula HOM05D016095 ORTHO05D001848 2.7e-13 80.1 153 42.5
Potri.002G112800 Populus trichocarpa HOM05D002243 ORTHO05D001848 3.5e-13 79.7 229 34.1
Manes.18G052200 Manihot esculenta HOM05D002243 ORTHO05D001848 4.6e-13 79.3 216 32.4
Manes.05G185500 Manihot esculenta HOM05D002243 ORTHO05D001848 1.0e-12 78.2 219 32.9
QL12p040753 Quercus lobata HOM05D002243 ORTHO05D001848 1.1e-11 74.7 286 29.4
Eucgr.F02202 Eucalyptus grandis HOM05D002243 ORTHO05D001848 2.1e-10 70.5 75 45.3
PSO832G2889 Papaver somniferum HOM05D002243 ORTHO05D001848 2.8e-10 70.1 120 41.7
Hma1.2p1_1953F.1_g308845 Hydrangea macrophylla HOM05D002243 ORTHO05D001848 4.7e-10 69.3 91 39.6
Hma1.2p1_1953F.1_g308850 Hydrangea macrophylla HOM05D002243 ORTHO05D001848 4.7e-10 69.3 91 39.6
Nn6g34568 Nelumbo nucifera HOM05D002243 ORTHO05D001848 4.7e-10 69.3 92 39.1
Oeu061818.1 Olea europaea HOM05D002243 ORTHO05D001848 4.7e-10 69.3 73 45.2
Peaxi162Scf00096g00157 Petunia axillaris HOM05D002243 ORTHO05D001848 6.2e-10 68.9 96 41.7
DCAR_025837 Daucus carota HOM05D002243 ORTHO05D001848 8.0e-10 68.6 109 34.9
THA.LOC104799838 Tarenaya hassleriana HOM05D002243 ORTHO05D001848 8.0e-10 68.6 164 35.4
Aqoxy6G01532 Aquilegia oxysepala HOM05D002243 ORTHO05D001848 1.0e-09 68.2 73 47.9
PSO782G0611 Papaver somniferum HOM05D002243 ORTHO05D001848 1.0e-09 68.2 120 40.8
Thecc.08G081200 Theobroma cacao HOM05D002243 ORTHO05D001848 1.0e-09 68.2 230 34.3
Dinv01223 Davidia involucrata HOM05D002243 ORTHO05D001848 1.8e-09 67.4 245 31.8
Nitab4.5_0006325g0010 Nicotiana tabacum HOM05D002243 ORTHO05D001848 1.8e-09 67.4 114 36.0
Nitab4.5_0001477g0030 Nicotiana tabacum HOM05D002243 ORTHO05D001848 2.3e-09 67.0 104 38.5
Oeu059798.2 Olea europaea HOM05D002243 ORTHO05D001848 4.0e-09 66.2 96 37.5
Ah.01g024500 Amaranthus hybridus HOM05D002243 ORTHO05D001848 6.8e-09 65.5 70 48.6
Lj2A425T27 Lonicera japonica HOM05D002243 ORTHO05D001848 6.8e-09 65.5 101 37.6
Nitab4.5_0007488g0020 Nicotiana tabacum HOM05D002243 ORTHO05D001848 6.8e-09 65.5 96 39.6
Nitab4.5_0000396g0020 Nicotiana tabacum HOM05D002243 ORTHO05D001848 1.2e-08 64.7 156 32.7
MSTRG.15339 Avicennia marina HOM05D002243 ORTHO05D001848 1.5e-08 64.3 109 35.8
TAR381G0567 Trochodendron aralioides HOM05D002243 ORTHO05D001848 1.5e-08 64.3 74 43.2
Dinv44914 Davidia involucrata HOM05D002243 ORTHO05D001848 2.6e-08 63.5 248 28.2
Zm00001eb055870 Zea mays HOM05D034594 ORTHO05D001848 3.4e-08 63.2 163 28.8
ATR0767G056 Amborella trichopoda HOM05D002243 ORTHO05D001848 4.4e-08 62.8 92 42.4
CAN.G504.9 Capsicum annuum HOM05D002243 ORTHO05D001848 4.4e-08 62.8 70 45.7
arahy.Tifrunner.gnm1.ann1.2Q65GK Arachis hypogaea HOM05D002243 ORTHO05D001848 5.8e-08 62.4 96 36.5
arahy.Tifrunner.gnm1.ann1.XGM7WG Arachis hypogaea HOM05D002243 ORTHO05D001848 5.8e-08 62.4 96 36.5
Glyma.04G087600 Glycine max HOM05D016095 ORTHO05D029748 5.8e-08 62.4 141 45.4
Potri.009G083900 Populus trichocarpa HOM05D002243 ORTHO05D001848 5.8e-08 62.4 110 34.5
Atru.chr13.906 Acer truncatum HOM05D002243 ORTHO05D001848 7.5e-08 62.0 217 32.7
Aa31LG7G14010 Aethionema arabicum HOM05D002243 ORTHO05D001848 7.5e-08 62.0 119 35.3
Dinv26979 Davidia involucrata HOM05D002243 ORTHO05D001848 7.5e-08 62.0 165 31.5
PGSC0003DMG400005118 Solanum tuberosum HOM05D002243 ORTHO05D001848 7.5e-08 62.0 70 47.1
TWI12G1105 Tripterygium wilfordii HOM05D002243 ORTHO05D001848 7.5e-08 62.0 236 31.4
CANSAT25G2495 Cannabis sativa HOM05D002243 ORTHO05D001848 9.8e-08 61.6 73 43.8
Lalb_Chr02g0144841 Lupinus albus HOM05D002243 ORTHO05D001848 1.3e-07 61.2 95 33.7
VMungo1215G3316 Vigna mungo HOM05D002243 ORTHO05D001848 1.3e-07 61.2 110 32.7
Aqoxy5G01944 Aquilegia oxysepala HOM05D002243 ORTHO05D001848 1.7e-07 60.8 113 36.3
CAN.G416.47 Capsicum annuum HOM05D002243 ORTHO05D001848 1.7e-07 60.8 125 33.6
Migut.H00311 Erythranthe guttata HOM05D002243 ORTHO05D001848 1.7e-07 60.8 77 42.9
Lj5P222T65 Lonicera japonica HOM05D002243 ORTHO05D001848 1.7e-07 60.8 93 39.8
MBI16_g31808_MAGBIO Magnolia biondii HOM05D002243 ORTHO05D001848 1.7e-07 60.8 73 45.2
Peaxi162Scf00016g03211 Petunia axillaris HOM05D002243 ORTHO05D001848 1.7e-07 60.8 101 39.6
Glyma.11G002700 Glycine max HOM05D002243 ORTHO05D001848 2.2e-07 60.5 74 40.5
Actinidia36403 Actinidia chinensis HOM05D002243 ORTHO05D001848 2.9e-07 60.1 128 32.8
AL4G12330 Arabidopsis lyrata HOM05D002243 ORTHO05D001848 3.7e-07 59.7 103 35.0
Duzib041G0685 Durio zibethinus HOM05D002243 ORTHO05D001848 3.7e-07 59.7 211 33.2
Migut.B00490 Erythranthe guttata HOM05D002243 ORTHO05D001848 4.9e-07 59.3 113 36.3
FAN15G2335 Fragaria x ananassa HOM05D002243 ORTHO05D001848 4.9e-07 59.3 93 37.6
FAN20G2409 Fragaria x ananassa HOM05D002243 ORTHO05D001848 4.9e-07 59.3 93 37.6
Lj9P338T47 Lonicera japonica HOM05D002243 ORTHO05D001848 4.9e-07 59.3 74 43.2
Phvul.009G113200 Phaseolus vulgaris HOM05D016095 ORTHO05D029748 4.9e-07 59.3 97 45.4
Sopen02g036460 Solanum pennellii HOM05D002243 ORTHO05D001848 4.9e-07 59.3 97 38.1
TWI59G0771 Tripterygium wilfordii HOM05D002243 ORTHO05D001848 4.9e-07 59.3 70 42.9
Atru.chr5.2225 Acer truncatum HOM05D002243 ORTHO05D001848 6.4e-07 58.9 70 44.3
FAN27G0993 Fragaria x ananassa HOM05D002243 ORTHO05D001848 6.4e-07 58.9 93 37.6
CSS0016364 Camellia sinensis var. sinensis HOM05D002243 ORTHO05D001848 8.3e-07 58.5 78 38.5
Lalb_Chr06g0164961 Lupinus albus HOM05D002243 ORTHO05D001848 8.3e-07 58.5 94 36.2
Ah.01g007180 Amaranthus hybridus HOM05D002243 ORTHO05D001848 1.1e-06 58.2 70 42.9
COL.COLO4_17804 Corchorus olitorius HOM05D002243 ORTHO05D001848 1.1e-06 58.2 117 35.9
DCAR_019339 Daucus carota HOM05D002243 ORTHO05D001848 1.1e-06 58.2 133 33.1
DCAR_021931 Daucus carota HOM05D002243 ORTHO05D001848 1.1e-06 58.2 203 27.6
ECA232G3326 Erigeron canadensis HOM05D002243 ORTHO05D001848 1.1e-06 58.2 97 39.2
FvH4_2g02971 Fragaria vesca HOM05D002243 ORTHO05D001848 1.1e-06 58.2 104 34.6
FAN24G3407 Fragaria x ananassa HOM05D002243 ORTHO05D001848 1.1e-06 58.2 104 34.6
Sabra09G0064600 Salix brachista HOM05D002243 ORTHO05D001848 1.1e-06 58.2 110 32.7
Solyc02g091890.3 Solanum lycopersicum HOM05D002243 ORTHO05D001848 1.1e-06 58.2 94 38.3
Sopen01g049010 Solanum pennellii HOM05D002243 ORTHO05D001848 1.1e-06 58.2 114 39.5
vmacro01929 Vaccinium macrocarpon HOM05D002243 ORTHO05D001848 1.1e-06 58.2 91 38.5
CSS0022177 Camellia sinensis var. sinensis HOM05D002243 ORTHO05D001848 1.4e-06 57.8 90 37.8
CSS0029796 Camellia sinensis var. sinensis HOM05D002243 ORTHO05D001848 1.4e-06 57.8 90 37.8
GSVIVG01006594001 Vitis vinifera HOM05D002243 ORTHO05D001848 1.4e-06 57.8 87 32.2
Cc07_g07600 Coffea canephora HOM05D023692 ORTHO05D001848 1.9e-06 57.4 92 35.9
Gohir.A06G027500 Gossypium hirsutum HOM05D002243 ORTHO05D001848 1.9e-06 57.4 157 35.7
Sc03g0000700 Simmondsia chinensis HOM05D002243 ORTHO05D001848 1.9e-06 57.4 103 36.9
SGA_v2.0_scaffold121G33087 Striga asiatica HOM05D002243 ORTHO05D001848 1.9e-06 57.4 114 36.8
Ciclev10028128m.g Citrus clementina HOM05D002243 ORTHO05D001848 2.4e-06 57.0 95 37.9
Lj4C79T2 Lonicera japonica HOM05D002243 ORTHO05D001848 2.4e-06 57.0 132 35.6
Solyc01g106680.4 Solanum lycopersicum HOM05D002243 ORTHO05D001848 2.4e-06 57.0 119 35.3
MSTRG.20241 Avicennia marina HOM05D002243 ORTHO05D001848 3.2e-06 56.6 115 35.7
CDE07G0845 Ceratophyllum demersum HOM05D001149 ORTHO05D001848 3.2e-06 56.6 71 46.5
Gohir.D06G024900 Gossypium hirsutum HOM05D002243 ORTHO05D001848 3.2e-06 56.6 159 33.3
Rhsim10G0087400 Rhododendron simsii HOM05D002243 ORTHO05D001848 3.2e-06 56.6 69 44.9
CAN.G1061.5 Capsicum annuum HOM05D002243 ORTHO05D001848 4.1e-06 56.2 162 32.1
CiPaw.06G162700 Carya illinoinensis HOM05D002243 ORTHO05D001848 4.1e-06 56.2 88 34.1
ClCG01G017950 Citrullus lanatus HOM05D002243 ORTHO05D001848 4.1e-06 56.2 99 33.3
CsaV3_6G044480 Cucumis sativus L. HOM05D002243 ORTHO05D001848 4.1e-06 56.2 123 31.7
Oeu039769.1 Olea europaea HOM05D002243 ORTHO05D001848 4.1e-06 56.2 127 32.3
RcHm_v2.0_Chr6g0247781 Rosa chinensis HOM05D002243 ORTHO05D001848 4.1e-06 56.2 104 36.5
CiPaw.05G022100 Carya illinoinensis HOM05D002243 ORTHO05D001848 5.4e-06 55.8 75 38.7
Lalb_Chr05g0220451 Lupinus albus HOM05D002243 ORTHO05D001848 5.4e-06 55.8 174 29.9
Lalb_Chr09g0329371 Lupinus albus HOM05D002243 ORTHO05D001848 5.4e-06 55.8 145 29.7
Sabra16G0180600 Salix brachista HOM05D002243 ORTHO05D001848 5.4e-06 55.8 88 39.8
vmacro22263 Vaccinium macrocarpon HOM05D002243 ORTHO05D001848 5.4e-06 55.8 74 39.2
CDE04G0825 Ceratophyllum demersum HOM05D002243 ORTHO05D001848 7.0e-06 55.5 71 45.1
DCAR_001867 Daucus carota HOM05D002243 ORTHO05D001848 7.0e-06 55.5 97 33.0
Manes.07G051400 Manihot esculenta HOM05D002243 ORTHO05D001848 7.0e-06 55.5 93 33.3
Peaxi162Scf00152g00066 Petunia axillaris HOM05D002243 ORTHO05D001848 7.0e-06 55.5 88 37.5
PGR004G1094 Punica granatum HOM05D002243 ORTHO05D001848 7.0e-06 55.5 113 35.4
SGA_v2.0_scaffold269G46251 Striga asiatica HOM05D002243 ORTHO05D001848 7.0e-06 55.5 103 35.9
GSVIVG01037020001 Vitis vinifera HOM05D002243 ORTHO05D001848 7.0e-06 55.5 72 38.9
PGR031G0180 Punica granatum HOM05D002243 ORTHO05D001848 9.2e-06 55.1 140 33.6
Rhsim11G0148900 Rhododendron simsii HOM05D002243 ORTHO05D001848 9.2e-06 55.1 258 31.4


User provided reference genes

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