Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0021038 Lotus japonicus HOM05D003331 ORTHO05D003264 5.4e-60 234.2 122 100.0
Gorai.007G191800 Gossypium raimondii HOM05D003331 ORTHO05D003264 1.6e-08 63.2 119 43.7
A09p11560 Brassica napus HOM05D003331 ORTHO05D003264 4.8e-08 61.6 83 43.4
BraA09t36802Z Brassica rapa HOM05D003331 ORTHO05D003264 6.2e-08 61.2 83 43.4
C09p13610 Brassica napus HOM05D003331 ORTHO05D003264 8.1e-08 60.8 83 43.4
BolC9t54251H Brassica oleracea HOM05D003331 ORTHO05D003264 8.1e-08 60.8 83 43.4
BraA09t36795Z Brassica rapa HOM05D003331 ORTHO05D003264 1.1e-07 60.5 83 43.4
Duzib264G0309 Durio zibethinus HOM05D003331 ORTHO05D003264 1.4e-07 60.1 85 47.1
QL06p051331 Quercus lobata HOM05D003331 ORTHO05D003264 1.4e-07 60.1 104 43.3
BcaNung00784 Brassica carinata HOM05D003331 ORTHO05D003264 1.8e-07 59.7 85 45.9
C01p03140 Brassica napus HOM05D003331 ORTHO05D003264 1.8e-07 59.7 85 45.9
Manes.01G149900 Manihot esculenta HOM05D003331 ORTHO05D003264 1.8e-07 59.7 85 49.4
Duzib147G1072 Durio zibethinus HOM05D003331 ORTHO05D003264 2.4e-07 59.3 85 47.1
Thecc.01G013300 Theobroma cacao HOM05D003331 ORTHO05D003264 2.4e-07 59.3 85 47.1
Actinidia02367 Actinidia chinensis HOM05D003331 ORTHO05D003264 3.1e-07 58.9 83 48.2
Sp7g33680 Schrenkiella parvula HOM05D003331 ORTHO05D003264 3.1e-07 58.9 92 42.4
A07p03180 Brassica napus HOM05D003331 ORTHO05D003264 4.0e-07 58.5 88 44.3
BraA07t28114Z Brassica rapa HOM05D003331 ORTHO05D003264 4.0e-07 58.5 88 44.3
Thhalv10025822m.g Eutrema salsugineum HOM05D003331 ORTHO05D003264 4.0e-07 58.5 87 44.8
Gorai.003G007000 Gossypium raimondii HOM05D003331 ORTHO05D003264 4.0e-07 58.5 85 47.1
BcaB03g16550 Brassica carinata HOM05D003331 ORTHO05D003264 9.0e-07 57.4 88 44.3
SGA_v2.0_scaffold137G35070 Striga asiatica HOM05D003331 ORTHO05D003264 9.0e-07 57.4 85 47.1
C07p61400 Brassica napus HOM05D003331 ORTHO05D003264 1.2e-06 57.0 87 44.8
BolC7t46566H Brassica oleracea HOM05D003331 ORTHO05D003264 1.2e-06 57.0 87 44.8
Carub.0003s3191 Capsella rubella HOM05D003331 ORTHO05D003264 1.2e-06 57.0 83 45.8
Gohir.A02G173200 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.5e-06 56.6 85 43.5
Gohir.D03G006700 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.5e-06 56.6 85 45.9
Sp3g31180 Schrenkiella parvula HOM05D003331 ORTHO05D003264 1.5e-06 56.6 82 45.1
Gohir.A01G109700 Gossypium hirsutum HOM05D003331 ORTHO05D003264 2.6e-06 55.8 85 45.9
CAN.G890.4 Capsicum annuum HOM05D003331 ORTHO05D003264 3.4e-06 55.5 84 42.9
ClCG10G000520 Citrullus lanatus HOM05D003331 ORTHO05D003264 3.4e-06 55.5 85 45.9
COL.COLO4_22478 Corchorus olitorius HOM05D003331 ORTHO05D003264 3.4e-06 55.5 85 43.5
CARHR244290 Cardamine hirsuta HOM05D003331 ORTHO05D003264 4.5e-06 55.1 85 44.7
MD02G1125100 Malus domestica HOM05D003331 ORTHO05D003264 4.5e-06 55.1 81 45.7
AL3G50780 Arabidopsis lyrata HOM05D003331 ORTHO05D003264 7.6e-06 54.3 99 38.4
BcaC04g22944 Brassica carinata HOM05D003331 ORTHO05D003264 7.6e-06 54.3 83 43.4
Thhalv10023128m.g Eutrema salsugineum HOM05D003331 ORTHO05D003264 1.0e-05 53.9 83 43.4
Glyma.04G022100 Glycine max HOM05D000531 ORTHO05D003264 1.0e-05 53.9 85 48.2
PGSC0003DMG400023897 Solanum tuberosum HOM05D003331 ORTHO05D003264 1.0e-05 53.9 85 43.5


User provided reference genes

Program Settings