Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0020490 Lotus japonicus HOM05D004031 ORTHO05D011186 4.5e-29 130.6 66 100.0
Glyma.19G150500 Glycine max HOM05D004031 ORTHO05D011186 1.1e-19 99.4 55 85.5
Phvul.001G144800 Phaseolus vulgaris HOM05D004031 ORTHO05D011186 1.1e-19 99.4 56 82.1
Lalb_Chr15g0079141 Lupinus albus HOM05D004031 ORTHO05D011186 2.1e-18 95.1 56 80.4
vmacro22628 Vaccinium macrocarpon HOM05D004031 ORTHO05D006678 4.0e-17 90.9 57 71.9
Medtr7g093770 Medicago truncatula HOM05D004031 ORTHO05D011186 6.8e-17 90.1 51 84.3
GSVIVG01033459001 Vitis vinifera HOM05D004031 ORTHO05D011186 6.8e-17 90.1 53 77.4
Sabra06G0149700 Salix brachista HOM05D004031 ORTHO05D006678 1.5e-16 89.0 71 60.6
Glyma.03G147100 Glycine max HOM05D004031 ORTHO05D011186 5.7e-16 87.0 50 84.0
Manes.09G038400 Manihot esculenta HOM05D004031 ORTHO05D011186 5.7e-16 87.0 51 76.5
Potri.016G060550 Populus trichocarpa HOM05D004031 ORTHO05D011186 1.7e-15 85.5 53 69.8
Dinv16349 Davidia involucrata HOM05D004031 ORTHO05D006678 2.2e-15 85.1 51 74.5
CDE05G3199 Ceratophyllum demersum HOM05D004031 ORTHO05D011186 2.8e-15 84.7 51 76.5
Eucgr.K01857 Eucalyptus grandis HOM05D004031 ORTHO05D011186 2.8e-15 84.7 53 73.6
Thecc.05G176000 Theobroma cacao HOM05D004031 ORTHO05D011186 2.8e-15 84.7 51 74.5
Nn7g35951 Nelumbo nucifera HOM05D004031 ORTHO05D011186 4.9e-15 84.0 55 72.7
Prupe.7G082600 Prunus persica HOM05D004031 ORTHO05D011186 4.9e-15 84.0 55 67.3
MD12G1054200 Malus domestica HOM05D004031 ORTHO05D011186 1.1e-14 82.8 53 67.9
CSS0013106 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D011186 1.4e-14 82.4 58 60.3
Actinidia32416 Actinidia chinensis HOM05D004031 ORTHO05D006678 1.8e-14 82.0 52 67.3
Migut.J01860 Erythranthe guttata HOM05D004031 ORTHO05D011186 1.8e-14 82.0 57 66.7
Gohir.D01G124600 Gossypium hirsutum HOM05D004031 ORTHO05D011186 1.8e-14 82.0 54 72.2
Nitab4.5_0000009g0260 Nicotiana tabacum HOM05D004031 ORTHO05D011186 1.8e-14 82.0 49 71.4
Nitab4.5_0007281g0010 Nicotiana tabacum HOM05D004031 ORTHO05D006678 1.8e-14 82.0 49 71.4
CiPaw.09G027900 Carya illinoinensis HOM05D004031 ORTHO05D011186 5.4e-14 80.5 53 67.9
Gohir.A01G137400 Gossypium hirsutum HOM05D004031 ORTHO05D011186 5.4e-14 80.5 54 70.4
CsaV3_3G038610 Cucumis sativus L. HOM05D004031 ORTHO05D006678 7.0e-14 80.1 64 60.9
MELO3C009606.2 Cucumis melo HOM05D004031 ORTHO05D011186 9.2e-14 79.7 50 70.0
Nn7g36859 Nelumbo nucifera HOM05D004031 ORTHO05D011186 9.2e-14 79.7 52 69.2
Sed0024429 Sechium edule HOM05D004031 ORTHO05D011186 9.2e-14 79.7 55 65.5
Cfa020139 Carpinus fangiana HOM05D004031 ORTHO05D006678 1.2e-13 79.3 50 72.0
RcHm_v2.0_Chr3g0479131 Rosa chinensis HOM05D004031 ORTHO05D011186 1.2e-13 79.3 56 66.1
Duzib128G0401 Durio zibethinus HOM05D004031 ORTHO05D011186 1.6e-13 79.0 51 70.6
Ciclev10013737m.g Citrus clementina HOM05D004031 ORTHO05D006678 3.5e-13 77.8 54 68.5
Cc06_g15560 Coffea canephora HOM05D004031 ORTHO05D011186 5.9e-13 77.0 58 63.8
Hma1.2p1_0124F.1_g058300 Hydrangea macrophylla HOM05D004031 ORTHO05D011186 2.9e-12 74.7 53 62.3
A03p37430 Brassica napus HOM05D004031 ORTHO05D011186 3.9e-12 74.3 55 65.5
Aa31LG3G5450 Aethionema arabicum HOM05D004031 ORTHO05D011186 6.6e-12 73.6 57 63.2
BcaB04g18697 Brassica carinata HOM05D004031 ORTHO05D006678 8.6e-12 73.2 57 63.2
BcaC01g04064 Brassica carinata HOM05D004031 ORTHO05D006678 8.6e-12 73.2 55 63.6
BolC3t16811H Brassica oleracea HOM05D004031 ORTHO05D006678 8.6e-12 73.2 55 63.6
Carub.0003s1134 Capsella rubella HOM05D004031 ORTHO05D011186 8.6e-12 73.2 57 63.2
Aa31LG3G5490 Aethionema arabicum HOM05D004031 ORTHO05D011186 1.1e-11 72.8 57 63.2
C03p45440 Brassica napus HOM05D004031 ORTHO05D006678 7.3e-11 70.1 55 61.8
HPP92_024784 Vanilla planifolia HOM05D004031 ORTHO05D006678 1.2e-10 69.3 55 56.4
BraA03t12904Z Brassica rapa HOM05D004031 ORTHO05D006678 2.8e-10 68.2 60 61.7
BcaC05g29296 Brassica carinata HOM05D004031 ORTHO05D006678 4.7e-10 67.4 57 61.4
C05p55790 Brassica napus HOM05D004031 ORTHO05D006678 4.7e-10 67.4 57 61.4
Lj1A1132T32 Lonicera japonica HOM05D004031 ORTHO05D006678 8.0e-10 66.6 44 72.7
SHI31744 Sapria himalayana HOM05D004031 ORTHO05D011186 7.5e-08 60.1 36 69.4
AUR62015326 Chenopodium quinoa HOM05D004031 ORTHO05D006678 1.3e-07 59.3 42 61.9
ATR0598G228 Amborella trichopoda HOM05D004031 ORTHO05D006678 2.2e-07 58.5 33 72.7
Mapoly0005s0168 Marchantia polymorpha HOM05D004031 ORTHO05D011186 8.3e-07 56.6 51 43.1
SEGI_01182 Sequoiadendron giganteum HOM05D004031 ORTHO05D011186 2.4e-06 55.1 34 67.6
Hund06156 Selenicereus undatus HOM05D000159 ORTHO05D011186 3.2e-06 54.7 34 64.7
Sed0004834 Sechium edule HOM05D004031 ORTHO05D011186 4.1e-06 54.3 63 47.6


User provided reference genes

Program Settings