Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0020458 Lotus japonicus HOM05D002281 ORTHO05D005599 0.0e+00 2516.1 1278 100.0
Glyma.19G250600 Glycine max HOM05D002281 ORTHO05D005599 0.0e+00 2421.7 1278 95.2
Glyma.03G253000 Glycine max HOM05D002281 ORTHO05D005599 0.0e+00 2421.0 1278 95.4
Medtr7g116590 Medicago truncatula HOM05D002281 ORTHO05D005599 0.0e+00 2406.7 1284 94.5
Phvul.006G107600 Phaseolus vulgaris HOM05D002281 ORTHO05D005599 0.0e+00 2402.5 1278 94.6
arahy.Tifrunner.gnm1.ann1.KCE1UK Arachis hypogaea HOM05D002281 ORTHO05D005599 0.0e+00 2398.2 1315 92.5
VMungo0540G0745 Vigna mungo HOM05D002281 ORTHO05D005599 0.0e+00 2379.7 1278 93.7
Ca_09474_v3 Cicer arietinum L. HOM05D002281 ORTHO05D005599 0.0e+00 2348.2 1301 92.1
arahy.Tifrunner.gnm1.ann1.T4Q4MP Arachis hypogaea HOM05D002281 ORTHO05D005599 0.0e+00 2340.5 1283 92.5
Cfa006304 Carpinus fangiana HOM05D002281 ORTHO05D005599 0.0e+00 2244.9 1288 88.0
Dinv05786 Davidia involucrata HOM05D002281 ORTHO05D005599 0.0e+00 2237.6 1288 87.6
CANSAT54G0020 Cannabis sativa HOM05D002281 ORTHO05D005599 0.0e+00 2235.3 1287 86.4
Thecc.05G264800 Theobroma cacao HOM05D002281 ORTHO05D005599 0.0e+00 2234.5 1287 87.3
Gohir.A13G102900 Gossypium hirsutum HOM05D002281 ORTHO05D005599 0.0e+00 2227.2 1287 87.0
CSS0028465 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D005599 0.0e+00 2224.9 1288 86.6
Gorai.013G119000 Gossypium raimondii HOM05D002281 ORTHO05D005599 0.0e+00 2223.4 1287 86.9
Atru.chr2.1138 Acer truncatum HOM05D002281 ORTHO05D005599 0.0e+00 2221.4 1287 86.7
Gohir.D13G106101 Gossypium hirsutum HOM05D002281 ORTHO05D005599 0.0e+00 2219.1 1287 86.7
GSVIVG01026355001 Vitis vinifera HOM05D002281 ORTHO05D005599 0.0e+00 2214.5 1302 85.0
Prupe.6G354800 Prunus persica HOM05D002281 ORTHO05D005599 0.0e+00 2211.4 1288 86.5
CiPaw.07G076600 Carya illinoinensis HOM05D002281 ORTHO05D005599 0.0e+00 2210.6 1288 86.5
FvH4_6g01330 Fragaria vesca HOM05D002281 ORTHO05D005599 0.0e+00 2209.5 1288 86.3
Potri.019G025200 Populus trichocarpa HOM05D002281 ORTHO05D005599 0.0e+00 2206.0 1288 86.4
TWI60G0078 Tripterygium wilfordii HOM05D002281 ORTHO05D005599 0.0e+00 2205.3 1286 85.7
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2194.1 1291 86.0
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2192.9 1288 85.7
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2192.2 1301 85.2
Manes.09G145500 Manihot esculenta HOM05D002281 ORTHO05D005599 0.0e+00 2191.4 1288 85.6
Potri.013G051200 Populus trichocarpa HOM05D002281 ORTHO05D005599 0.0e+00 2189.8 1288 85.6
Duzib106G1897 Durio zibethinus HOM05D002281 ORTHO05D005599 0.0e+00 2186.8 1287 85.9
TAR362G0445 Trochodendron aralioides HOM05D002281 ORTHO05D005599 0.0e+00 2177.9 1288 85.4
Eucgr.B02169 Eucalyptus grandis HOM05D002281 ORTHO05D005599 0.0e+00 2176.0 1293 84.9
PGR142G2635 Punica granatum HOM05D002281 ORTHO05D005599 0.0e+00 2173.3 1288 84.2
THA.LOC104820753 Tarenaya hassleriana HOM05D002281 ORTHO05D005599 0.0e+00 2163.3 1282 84.0
Carub.0006s1667 Capsella rubella HOM05D002281 ORTHO05D005599 0.0e+00 2156.7 1282 83.5
AT5G18410 Arabidopsis thaliana HOM05D002281 ORTHO05D005599 0.0e+00 2155.9 1282 83.3
Thhalv10012457m.g Eutrema salsugineum HOM05D002281 ORTHO05D005599 0.0e+00 2155.9 1282 83.5
ECA233G3880 Erigeron canadensis HOM05D002281 ORTHO05D005599 0.0e+00 2151.3 1285 83.6
Hma1.2p1_0153F.1_g067890 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 0.0e+00 2147.9 1293 84.5
Sabra19G0037800 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 2147.9 1304 83.8
Solyc11g013280.1 Solanum lycopersicum HOM05D002281 ORTHO05D005599 0.0e+00 2145.5 1289 83.0
CARHR194610 Cardamine hirsuta HOM05D002281 ORTHO05D005599 0.0e+00 2144.8 1282 83.1
Sabra19G0034800 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 2143.6 1304 83.6
BolC3t13512H Brassica oleracea HOM05D002281 ORTHO05D005599 0.0e+00 2143.2 1291 82.6
AL6G29660 Arabidopsis lyrata HOM05D002281 ORTHO05D005599 0.0e+00 2142.1 1286 82.9
Ciclev10023801m.g Citrus clementina HOM05D002281 ORTHO05D005599 0.0e+00 2139.0 1295 84.3
Sed0017844 Sechium edule HOM05D002281 ORTHO05D005599 0.0e+00 2139.0 1296 82.9
HanXRQChr04g0111671 Helianthus annuus HOM05D002281 ORTHO05D005599 0.0e+00 2130.1 1298 82.3
Sopen11g008300 Solanum pennellii HOM05D002281 ORTHO05D005599 0.0e+00 2130.1 1289 82.7
SalBow7G0462 Salvia bowleyana HOM05D002281 ORTHO05D005599 0.0e+00 2129.8 1288 81.7
BraA03t10208Z Brassica rapa HOM05D002281 ORTHO05D005599 0.0e+00 2127.1 1294 82.0
Aqoxy5G01434 Aquilegia oxysepala HOM05D002281 ORTHO05D005599 0.0e+00 2126.3 1288 82.7
COL.COLO4_38179 Corchorus olitorius HOM05D002281 ORTHO05D005599 0.0e+00 2126.3 1287 83.7
MSTRG.1472 Avicennia marina HOM05D002281 ORTHO05D005599 0.0e+00 2124.0 1289 81.8
Migut.C01166 Erythranthe guttata HOM05D002281 ORTHO05D005599 0.0e+00 2117.4 1288 81.9
Lsat_1_v5_gn_8_2941 Lactuca sativa HOM05D002281 ORTHO05D005599 0.0e+00 2115.1 1284 82.7
SalBow7G2659 Salvia bowleyana HOM05D002281 ORTHO05D005599 0.0e+00 2107.8 1288 81.2
Sc09g0001770 Simmondsia chinensis HOM05D002281 ORTHO05D005599 0.0e+00 2106.3 1287 81.4
Sp6g25910 Schrenkiella parvula HOM05D002281 ORTHO05D005599 0.0e+00 2103.9 1285 81.9
Nn1g03089 Nelumbo nucifera HOM05D002281 ORTHO05D005599 0.0e+00 2103.2 1288 82.5
PSO674G0074 Papaver somniferum HOM05D002281 ORTHO05D005599 0.0e+00 2096.6 1287 81.7
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2092.4 1290 82.7
PSO170G6144 Papaver somniferum HOM05D002281 ORTHO05D005599 0.0e+00 2090.8 1287 81.5
A03p08830 Brassica napus HOM05D002281 ORTHO05D005599 0.0e+00 2090.5 1295 80.8
C03p10320 Brassica napus HOM05D002281 ORTHO05D005599 0.0e+00 2080.8 1292 80.9
Haze_04485 Corylus avellana HOM05D002281 ORTHO05D005599 0.0e+00 2075.8 1308 82.0
Nitab4.5_0000494g0100 Nicotiana tabacum HOM05D002281 ORTHO05D005599 0.0e+00 2075.1 1289 81.1
EL10Ac4g09788 Beta vulgaris HOM05D002281 ORTHO05D005599 0.0e+00 2062.3 1280 80.5
BcaB01g05191 Brassica carinata HOM05D002281 ORTHO05D005599 0.0e+00 2053.5 1295 79.8
SGA_v2.0_scaffold52G18996 Striga asiatica HOM05D002281 ORTHO05D005599 0.0e+00 2002.6 1215 81.7
Nitab4.5_0000051g0330 Nicotiana tabacum HOM05D002281 ORTHO05D005599 0.0e+00 1992.6 1415 73.4
Sabra13G0046600 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 1956.0 1549 68.2
Cc10_g10590 Coffea canephora HOM05D002281 ORTHO05D005599 0.0e+00 1932.9 1175 81.7
Hund07164 Selenicereus undatus HOM05D002281 ORTHO05D005599 0.0e+00 1923.7 1223 78.3
Aa31LG11G11220 Aethionema arabicum HOM05D002281 ORTHO05D005599 0.0e+00 1923.3 1285 76.7
Os03g0143800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D005599 0.0e+00 1883.2 1291 73.7
Zm00001eb003550 Zea mays HOM05D002281 ORTHO05D005599 0.0e+00 1858.2 1284 72.8
Psat0s3583g0040 Pisum sativum HOM05D002281 ORTHO05D005599 0.0e+00 1783.8 945 95.1
AUR62000642 Chenopodium quinoa HOM05D002281 ORTHO05D005599 0.0e+00 1756.9 1308 70.6
Lalb_Chr18g0044201 Lupinus albus HOM05D002281 ORTHO05D005599 0.0e+00 1712.2 904 94.4
Cpa.g.sc51.37 Carica papaya HOM05D002281 ORTHO05D005599 0.0e+00 1630.5 960 86.7
RcHm_v2.0_Chr3g0448901 Rosa chinensis HOM05D002281 ORTHO05D005599 0.0e+00 1605.1 942 84.8
Rhsim05G0168900 Rhododendron simsii HOM05D002281 ORTHO05D005599 0.0e+00 1577.4 1069 77.5
MELO3C015463.2 Cucumis melo HOM05D002281 ORTHO05D005599 0.0e+00 1529.2 938 80.7
HPP92_013019 Vanilla planifolia HOM05D002281 ORTHO05D005599 0.0e+00 1522.7 1209 65.3
Actinidia03823 Actinidia chinensis HOM05D002281 ORTHO05D005599 0.0e+00 1516.5 908 82.5
AagrBONN_evm.TU.Sc2ySwM_344.4016 Anthoceros agrestis HOM05D002281 ORTHO05D005599 0.0e+00 1501.9 1289 60.0
Mapoly0078s0045 Marchantia polymorpha HOM05D002281 ORTHO05D005599 0.0e+00 1488.0 1288 59.1
CsaV3_1G040360 Cucumis sativus L. HOM05D002281 ORTHO05D005599 0.0e+00 1483.4 912 80.8
Pp3c21_8020 Physcomitrium patens HOM05D002281 ORTHO05D005599 0.0e+00 1483.4 1328 57.2
ClCG03G011410 Citrullus lanatus HOM05D002281 ORTHO05D005599 0.0e+00 1478.8 910 80.4
unitig_736.g22260 Utricularia gibba HOM05D002281 ORTHO05D005599 0.0e+00 1476.8 1182 65.4
SMO348G0052 Selaginella moellendorffii HOM05D002281 ORTHO05D005599 0.0e+00 1449.5 1291 57.7
MD12G1252900 Malus domestica HOM05D002281 ORTHO05D005599 0.0e+00 1432.5 840 84.9
Peaxi162Scf00285g00226 Petunia axillaris HOM05D002281 ORTHO05D005599 0.0e+00 1412.9 912 77.1
DCAR_005524 Daucus carota HOM05D002281 ORTHO05D005599 0.0e+00 1354.0 955 72.6
Pp3c2_6040 Physcomitrium patens HOM05D002281 ORTHO05D005599 0.0e+00 1320.8 1307 52.9
ATR0787G096 Amborella trichopoda HOM05D002281 ORTHO05D005599 0.0e+00 1285.8 917 69.8
Hma1.2p1_0153F.1_g067920 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 0.0e+00 1128.6 687 83.8
CAN.G61.7 Capsicum annuum HOM05D002281 ORTHO05D005599 9.1e-251 871.3 803 59.8
Ah.06g188740 Amaranthus hybridus HOM05D002281 ORTHO05D005599 6.3e-244 848.6 826 56.2
Lj2A49T37 Lonicera japonica HOM05D002281 ORTHO05D005599 2.0e-237 827.0 476 87.6
AUR62006997 Chenopodium quinoa HOM05D002281 ORTHO05D005599 1.9e-211 740.7 499 76.8
MD12G1252700 Malus domestica HOM05D002281 ORTHO05D005599 5.8e-205 719.2 451 82.5
SHI14430 Sapria himalayana HOM05D002281 ORTHO05D005599 2.0e-197 694.1 547 66.4
Actinidia03824 Actinidia chinensis HOM05D002281 ORTHO05D005599 1.0e-177 628.6 347 93.1
Lalb_Chr18g0044191 Lupinus albus HOM05D002281 ORTHO05D005599 3.0e-177 627.1 347 93.4
Psat0s2603g0080 Pisum sativum HOM05D002281 ORTHO05D005599 9.6e-176 622.1 335 90.4
RcHm_v2.0_Chr3g0448911 Rosa chinensis HOM05D002281 ORTHO05D005599 1.8e-174 617.8 347 91.4
SEGI_41506 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 1.1e-171 608.6 420 72.1
CAN.G61.6 Capsicum annuum HOM05D002281 ORTHO05D005599 1.3e-169 601.7 347 89.0
CDE01G0796 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 2.1e-162 577.8 450 64.9
ATR0787G220 Amborella trichopoda HOM05D002281 ORTHO05D005599 1.5e-160 571.6 347 85.0
ClCG03G011400 Citrullus lanatus HOM05D002281 ORTHO05D005599 4.3e-160 570.1 347 85.9
CsaV3_1G040370 Cucumis sativus L. HOM05D002281 ORTHO05D005599 3.2e-155 553.9 347 83.6
CDE01G0576 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 2.5e-152 544.3 374 72.7
CBR_g23328 Chara braunii HOM05D002281 ORTHO05D005599 1.1e-144 518.8 636 43.6
Cpa.g.sc51.41 Carica papaya HOM05D002281 ORTHO05D005599 2.8e-143 514.2 303 82.2
vmacro19963 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 2.4e-142 511.1 420 68.8
Peaxi162Scf00285g00225 Petunia axillaris HOM05D002281 ORTHO05D005599 1.9e-139 501.5 274 93.1
DCAR_005525 Daucus carota HOM05D002281 ORTHO05D005599 2.8e-127 461.1 261 89.7
HPP92_013016 Vanilla planifolia HOM05D002281 ORTHO05D005599 9.4e-123 446.0 302 71.9
CAN.G61.8 Capsicum annuum HOM05D002281 ORTHO05D005599 4.4e-120 437.2 411 57.7
Haze_04492 Corylus avellana HOM05D002281 ORTHO05D005599 5.9e-117 426.8 274 83.6
Lj2A49G34 Lonicera japonica HOM05D002281 ORTHO05D005599 1.2e-114 419.1 243 85.2
arahy.Tifrunner.gnm1.ann1.I7KFZB Arachis hypogaea HOM05D002281 ORTHO05D005599 2.1e-106 391.7 259 82.6
HPP92_013015 Vanilla planifolia HOM05D002281 ORTHO05D005599 2.1e-106 391.7 347 62.0
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 1.7e-103 382.1 260 78.1
SEGI_00068 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 3.3e-83 314.7 268 60.4
CBR_g23326 Chara braunii HOM05D002281 ORTHO05D005599 1.4e-70 272.7 464 33.2
Hma1.2p1_0153F.1_g067900 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 1.9e-70 272.3 154 90.9
vmacro19965 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 1.2e-69 269.6 166 78.3
Ah.06g188770 Amaranthus hybridus HOM05D002281 ORTHO05D005599 5.1e-60 237.7 134 88.8
vmacro19966 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 1.9e-59 235.7 426 37.6
Cc10_g10600 Coffea canephora HOM05D002281 ORTHO05D005599 5.8e-56 224.2 130 88.5
Lj2A50T26 Lonicera japonica HOM05D002281 ORTHO05D005599 1.7e-55 222.6 134 80.6
SHI14432 Sapria himalayana HOM05D002281 ORTHO05D005599 1.9e-54 219.2 142 76.1
Lj2A49G35 Lonicera japonica HOM05D002281 ORTHO05D005599 9.6e-51 206.8 130 77.7
Lj2A49T38 Lonicera japonica HOM05D002281 ORTHO05D005599 3.1e-49 201.8 119 81.5
CDE02G3044 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 9.6e-43 180.3 127 67.7
CBR_g74560 Chara braunii HOM05D002281 ORTHO05D005599 1.4e-38 166.4 161 55.3
BraA03t10210Z Brassica rapa HOM05D002281 ORTHO05D005599 4.2e-38 164.9 123 70.7
Gorai.007G272700 Gossypium raimondii HOM05D002281 ORTHO05D005599 4.2e-38 164.9 128 65.6
Gohir.D11G253675 Gossypium hirsutum HOM05D002281 ORTHO05D005599 2.7e-37 162.2 128 64.8
FAN14G5351 Fragaria x ananassa HOM05D002281 ORTHO05D006774 9.7e-35 153.7 128 67.2
A03p08860 Brassica napus HOM05D002281 ORTHO05D005599 1.2e-32 146.7 123 64.2
SEGI_02952 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 2.6e-32 145.6 113 62.8
SEGI_33538 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 3.0e-28 132.1 95 64.2
SEGI_28731 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 6.3e-26 124.4 85 67.1
Gohir.D11G253550 Gossypium hirsutum HOM05D002281 ORTHO05D005599 1.2e-24 120.2 77 74.0
Gorai.007G272500 Gossypium raimondii HOM05D002281 ORTHO05D005599 1.2e-24 120.2 77 72.7
Nn6g32299 Nelumbo nucifera HOM05D002281 ORTHO05D005599 1.1e-22 113.6 73 76.7
Gohir.A11G244201 Gossypium hirsutum HOM05D002281 ORTHO05D005599 1.9e-22 112.8 75 69.3
SHI14427 Sapria himalayana HOM05D000030 ORTHO05D000009 5.2e-20 104.8 121 52.1
arahy.Tifrunner.gnm1.ann1.57298L Arachis hypogaea HOM05D002281 ORTHO05D005599 1.0e-15 90.5 99 55.6
HPP92_013017 Vanilla planifolia HOM05D002281 ORTHO05D005599 3.2e-14 85.5 54 77.8
QL06p040095 Quercus lobata HOM05D002281 ORTHO05D005599 4.0e-12 78.6 50 76.0
Ah.06g188760 Amaranthus hybridus HOM05D002281 ORTHO05D006774 2.0e-08 66.2 142 35.2
vmacro19964 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 5.9e-08 64.7 34 79.4


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