Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0020102 Lotus japonicus HOM05D008402 ORTHO05D000988 1.5e-68 262.7 127 100.0
Lj1g0024978 Lotus japonicus HOM05D008402 ORTHO05D000988 1.2e-62 243.0 127 94.5
Lj1g0006941 Lotus japonicus HOM05D008402 ORTHO05D000988 1.5e-60 236.1 127 92.9
Lj1g0003999 Lotus japonicus HOM05D008402 ORTHO05D000988 1.6e-59 232.6 127 91.3
Lj1g0018072 Lotus japonicus HOM05D008402 ORTHO05D000988 1.1e-58 229.9 126 89.7
Lj1g0017901 Lotus japonicus HOM05D008402 ORTHO05D000988 5.2e-58 227.6 127 88.2
Lj1g0004343 Lotus japonicus HOM05D008402 ORTHO05D000988 6.8e-58 227.3 125 89.6
Lj1g0025701 Lotus japonicus HOM05D008402 ORTHO05D000988 2.0e-57 225.7 127 88.2
Lj1g0020175 Lotus japonicus HOM05D008402 ORTHO05D000988 2.9e-56 221.9 127 87.4
Lj1g0020043 Lotus japonicus HOM05D008402 ORTHO05D000988 7.1e-55 217.2 127 85.0
Psat4g199160 Pisum sativum HOM05D008402 ORTHO05D000988 1.1e-28 130.2 134 47.8
Glyma.05G076900 Glycine max HOM05D008402 ORTHO05D000988 1.9e-28 129.4 125 52.8
Glyma.19G071200 Glycine max HOM05D008402 ORTHO05D000988 3.3e-28 128.6 133 52.6
Phvul.004G083300 Phaseolus vulgaris HOM05D008402 ORTHO05D000988 4.3e-28 128.3 131 50.4
Glyma.19G071100 Glycine max HOM05D008402 ORTHO05D000988 7.4e-28 127.5 117 57.3
Psat5g145680 Pisum sativum HOM05D008402 ORTHO05D000988 7.4e-28 127.5 135 45.9
Medtr8g031540 Medicago truncatula HOM05D008402 ORTHO05D000988 1.6e-27 126.3 134 49.3
Psat4g199200 Pisum sativum HOM05D008402 ORTHO05D000988 3.7e-27 125.2 134 46.3
TPR.G17585 Trifolium pratense HOM05D008402 ORTHO05D000988 3.1e-26 122.1 121 49.6
TPR.G4392 Trifolium pratense HOM05D008402 ORTHO05D000988 1.2e-25 120.2 123 47.2
Medtr1g054815 Medicago truncatula HOM05D008402 ORTHO05D000988 5.1e-21 104.8 130 43.1
Medtr8g011770 Medicago truncatula HOM05D008402 ORTHO05D000988 5.1e-21 104.8 125 42.4
Glyma.13G031400 Glycine max HOM05D008402 ORTHO05D000988 8.7e-21 104.0 119 43.7
TPR.G29356 Trifolium pratense HOM05D008402 ORTHO05D000988 8.7e-21 104.0 120 39.2
Medtr1g054825 Medicago truncatula HOM05D008402 ORTHO05D000988 1.5e-20 103.2 130 43.1
Glyma.14G153100 Glycine max HOM05D008402 ORTHO05D000988 2.5e-20 102.4 121 43.0
TPR.G39632 Trifolium pratense HOM05D008402 ORTHO05D000988 2.5e-20 102.4 144 41.0
Phvul.001G071800 Phaseolus vulgaris HOM05D008402 ORTHO05D000988 3.3e-20 102.1 126 38.9
Medtr8g011880 Medicago truncatula HOM05D008402 ORTHO05D000988 1.6e-19 99.8 132 43.2
Medtr8g011760 Medicago truncatula HOM05D008402 ORTHO05D000988 3.7e-19 98.6 125 42.4
Medtr8g011740 Medicago truncatula HOM05D008402 ORTHO05D000988 6.3e-19 97.8 121 40.5
TPR.G4413 Trifolium pratense HOM05D005745 ORTHO05D006857 1.1e-18 97.1 84 54.8
Glyma.19G054100 Glycine max HOM05D008402 ORTHO05D000988 1.4e-18 96.7 129 41.9
Phvul.001G071700 Phaseolus vulgaris HOM05D008402 ORTHO05D000988 2.4e-18 95.9 130 40.0
Lalb_Chr01g0019651 Lupinus albus HOM05D008402 ORTHO05D000988 1.5e-17 93.2 132 36.4
VMungo0647G1641 Vigna mungo HOM05D008402 ORTHO05D000988 2.6e-17 92.4 129 36.4
VMungo0647G0396 Vigna mungo HOM05D008402 ORTHO05D000988 4.5e-17 91.7 125 40.8
VMungo0647G2588 Vigna mungo HOM05D008402 ORTHO05D000988 2.2e-16 89.4 124 38.7
Glyma.18G066800 Glycine max HOM05D008402 ORTHO05D000988 6.5e-16 87.8 83 42.2
TPR.G20479 Trifolium pratense HOM05D008402 ORTHO05D000988 6.5e-16 87.8 120 40.0
Lalb_Chr08g0236561 Lupinus albus HOM05D008402 ORTHO05D000988 4.2e-15 85.1 123 39.8
Phvul.001G065900 Phaseolus vulgaris HOM05D008402 ORTHO05D000988 2.1e-14 82.8 77 42.9
Lalb_Chr17g0345781 Lupinus albus HOM05D008402 ORTHO05D000988 9.7e-12 73.9 123 33.3
Lj1g0018215 Lotus japonicus HOM05D008402 ORTHO05D000988 1.3e-11 73.6 82 45.1
Lalb_Chr14g0374851 Lupinus albus HOM05D008402 ORTHO05D000988 1.7e-11 73.2 123 33.3
Lalb_Chr17g0345791 Lupinus albus HOM05D008402 ORTHO05D000988 8.2e-11 70.9 80 45.0
QL05p012573 Quercus lobata HOM05D008402 ORTHO05D000988 6.9e-10 67.8 126 31.0
Medtr8g031570 Medicago truncatula HOM05D008402 ORTHO05D000988 7.7e-09 64.3 123 35.0
Thecc.05G151700 Theobroma cacao HOM05D001614 ORTHO05D000988 2.2e-08 62.8 84 36.9
QL02p095319 Quercus lobata HOM05D000003 ORTHO05D000126 2.1e-06 56.2 123 35.0
Eucgr.E01745 Eucalyptus grandis HOM05D067861 ORTHO05D012225 3.6e-06 55.5 69 36.2
Gohir.D01G184200 Gossypium hirsutum HOM05D008402 ORTHO05D000988 3.6e-06 55.5 119 28.6
Gorai.002G227700 Gossypium raimondii HOM05D008402 ORTHO05D000988 3.6e-06 55.5 119 28.6
Nn1g05895 Nelumbo nucifera HOM05D008402 ORTHO05D000988 4.7e-06 55.1 121 32.2
Eucgr.E01746 Eucalyptus grandis HOM05D067861 ORTHO05D012225 7.9e-06 54.3 105 32.4


User provided reference genes

Program Settings