Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 7.7e-183 643.7 318 100.0
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 2.9e-121 439.1 290 79.3
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 3.0e-118 429.1 290 79.3
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 6.6e-118 427.9 302 75.8
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 1.1e-117 427.2 293 78.2
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 2.7e-111 406.0 290 76.2
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 4.3e-109 398.7 299 72.2
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 9.6e-109 397.5 295 71.5
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 1.6e-108 396.7 292 73.3
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 4.9e-105 385.2 295 71.5
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 1.4e-99 367.1 290 66.9
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 1.4e-99 367.1 299 63.9
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.6e-98 362.8 289 64.4
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 4.5e-98 362.1 290 64.1
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 8.4e-97 357.8 300 63.0
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 1.9e-96 356.7 300 62.3
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 9.3e-96 354.4 297 62.3
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 1.6e-95 353.6 291 62.5
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 6.0e-95 351.7 290 63.8
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.3e-94 349.7 290 62.4
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 3.9e-94 349.0 290 64.1
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 3.9e-94 349.0 291 63.6
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 3.9e-94 349.0 288 64.2
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 1.5e-93 347.1 295 61.7
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 2.5e-93 346.3 297 63.3
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 4.3e-93 345.5 301 62.8
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 5.6e-93 345.1 292 63.0
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 5.6e-93 345.1 298 62.8
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 1.3e-92 344.0 290 62.8
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 1.6e-92 343.6 289 62.6
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 1.6e-92 343.6 291 62.9
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 1.6e-92 343.6 288 64.6
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 2.8e-92 342.8 291 63.6
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 2.8e-92 342.8 290 63.1
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 1.4e-91 340.5 290 63.8
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 1.8e-91 340.1 288 62.2
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 2.6e-90 336.3 301 61.1
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 4.5e-90 335.5 291 60.8
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 2.9e-89 332.8 231 73.6
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 2.9e-89 332.8 295 61.0
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 2.9e-89 332.8 288 62.8
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 3.8e-89 332.4 324 59.0
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 4.9e-89 332.0 291 60.8
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 1.4e-88 330.5 306 61.8
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 1.9e-88 330.1 324 57.4
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 1.2e-87 327.4 326 57.7
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 6.0e-87 325.1 179 84.9
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 1.3e-86 323.9 295 60.0
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 3.0e-86 322.8 289 62.3
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 3.3e-85 319.3 295 59.3
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 2.8e-84 316.2 284 58.8
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 2.8e-84 316.2 288 58.0
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 3.7e-84 315.8 193 80.3
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 4.8e-84 315.5 293 58.4
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 6.2e-84 315.1 294 59.5
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 2.4e-83 313.2 282 59.6
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 2.4e-83 313.2 282 59.6
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 2.4e-83 313.2 282 59.6
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 6.9e-83 311.6 281 60.5
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 9.0e-83 311.2 192 76.6
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 4.5e-82 308.9 302 61.6
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 7.6e-82 308.1 199 72.9
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 7.6e-82 308.1 192 75.5
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 1.7e-81 307.0 315 54.6
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 2.2e-81 306.6 295 58.3
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 2.2e-81 306.6 196 75.5
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 2.9e-81 306.2 230 67.0
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 3.8e-81 305.8 179 78.8
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 6.5e-81 305.1 302 56.6
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 1.9e-80 303.5 287 58.5
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 7.1e-80 301.6 271 60.1
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.7e-79 299.7 300 55.7
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 1.0e-78 297.7 202 72.3
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 1.0e-78 297.7 291 54.6
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 2.3e-78 296.6 224 66.5
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 2.3e-78 296.6 187 77.0
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 3.3e-77 292.7 229 65.1
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 3.3e-77 292.7 291 56.0
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 1.1e-75 287.7 297 54.2
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 5.3e-75 285.4 163 81.0
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 6.5e-73 278.5 196 68.4
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 1.4e-72 277.3 351 48.7
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 1.2e-71 274.2 294 53.1
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 1.8e-70 270.4 147 88.4
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 1.5e-69 267.3 162 77.2
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 6.3e-68 261.9 157 78.3
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 1.4e-67 260.8 148 81.8
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 1.5e-66 257.3 153 79.7
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 3.2e-64 249.6 170 70.0
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 3.6e-63 246.1 148 79.7
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 4.7e-63 245.7 228 59.6
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 7.9e-63 245.0 288 51.4
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 6.7e-62 241.9 267 51.7
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 6.3e-60 235.3 262 51.5
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 4.2e-56 222.6 188 55.9
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 2.1e-55 220.3 164 65.9
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 3.3e-53 213.0 182 57.7
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 9.7e-53 211.5 182 56.0
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 3.7e-52 209.5 179 56.4
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 9.1e-51 204.9 230 52.2
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 6.7e-46 188.7 325 40.6
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 5.7e-45 185.7 300 41.0
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 7.5e-45 185.3 187 47.6
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 4.1e-43 179.5 139 64.0
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 6.5e-41 172.2 164 55.5
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 1.9e-40 170.6 288 41.3
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 3.0e-38 163.3 353 34.3
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 2.8e-36 156.8 218 42.7
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 4.5e-34 149.4 104 69.2
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 3.8e-33 146.4 177 45.2
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 8.6e-33 145.2 218 39.9
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 1.6e-31 141.0 90 72.2
SEGI_36650 Sequoiadendron giganteum HOM05D006942 ORTHO05D008737 1.2e-21 108.2 86 66.3
Zm00001eb300960 Zea mays HOM05D006942 ORTHO05D008737 1.9e-08 64.3 37 78.4
CSS0026826 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 4.0e-06 56.6 50 54.0
Pp3s30_1160 Physcomitrium patens HOM05D006942 ORTHO05D317230 5.2e-06 56.2 59 42.4


User provided reference genes

Program Settings