Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 7.1e-122 440.7 229 100.0
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 2.5e-87 325.9 212 81.6
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 3.7e-86 322.0 228 74.1
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 7.7e-84 314.3 229 71.2
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 5.0e-83 311.6 230 70.9
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 5.0e-83 311.6 240 71.2
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 2.5e-82 309.3 229 71.6
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 5.5e-82 308.1 205 77.1
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 7.2e-82 307.8 235 69.8
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 9.4e-82 307.4 229 69.4
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 2.7e-81 305.8 229 68.6
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 6.1e-81 304.7 231 69.3
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 2.3e-80 302.8 191 80.6
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 3.0e-80 302.4 231 69.7
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 3.0e-80 302.4 229 70.7
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 8.8e-80 300.8 235 68.5
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 3.3e-79 298.9 237 68.4
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 3.3e-79 298.9 229 69.9
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 4.4e-79 298.5 229 69.0
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 1.3e-78 297.0 228 68.9
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 1.3e-78 297.0 222 71.6
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 1.7e-78 296.6 232 68.5
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 8.2e-78 294.3 229 66.8
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 4.1e-77 292.0 230 69.1
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 7.0e-77 291.2 244 65.6
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 1.2e-76 290.4 229 66.8
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 1.5e-76 290.0 229 69.4
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 2.0e-76 289.7 229 65.5
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 4.5e-76 288.5 222 68.9
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 4.5e-76 288.5 191 75.4
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 1.0e-75 287.3 205 70.7
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 1.0e-75 287.3 231 68.0
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 1.7e-75 286.6 224 66.1
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 1.7e-75 286.6 242 64.9
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 2.2e-75 286.2 224 67.0
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 3.8e-75 285.4 182 80.2
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 5.0e-75 285.0 230 67.0
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 6.5e-75 284.6 230 66.5
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 6.5e-75 284.6 230 67.0
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.1e-74 283.9 230 66.5
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 1.1e-74 283.9 231 65.8
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 1.1e-74 283.9 225 68.4
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 1.4e-74 283.5 226 66.4
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.9e-74 283.1 229 65.9
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 2.5e-74 282.7 228 65.4
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 2.5e-74 282.7 208 71.2
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 9.4e-74 280.8 208 69.7
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 9.4e-74 280.8 208 69.7
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 1.2e-73 280.4 223 68.2
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 1.6e-73 280.0 238 64.7
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 2.1e-73 279.6 214 65.4
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 3.6e-73 278.9 234 65.0
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 1.4e-72 276.9 231 64.1
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 3.0e-72 275.8 214 64.5
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 5.2e-72 275.0 238 63.9
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 5.2e-72 275.0 225 66.7
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 6.7e-72 274.6 214 64.0
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 6.7e-72 274.6 198 72.7
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 1.1e-71 273.9 211 66.8
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 2.6e-71 272.7 174 79.9
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 5.7e-71 271.6 215 67.9
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 1.3e-70 270.4 225 62.7
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 2.8e-70 269.2 229 63.8
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 1.8e-69 266.5 221 65.2
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 7.0e-69 264.6 229 62.9
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 9.1e-69 264.2 225 63.6
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 3.5e-68 262.3 226 61.1
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 7.7e-68 261.2 180 72.8
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 1.7e-67 260.0 223 61.0
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 6.5e-67 258.1 232 62.1
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 8.5e-67 257.7 223 61.0
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 8.5e-67 257.7 230 63.0
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 4.2e-66 255.4 202 69.8
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 7.2e-66 254.6 175 74.3
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 9.4e-66 254.2 192 65.1
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 3.0e-64 249.2 216 59.7
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 2.6e-63 246.1 178 73.0
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 3.4e-63 245.7 185 69.2
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 1.7e-62 243.4 173 69.9
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 3.7e-62 242.3 206 61.7
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 3.7e-62 242.3 226 58.8
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 4.8e-62 241.9 223 60.5
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 1.1e-61 240.7 229 58.1
Lj1g0003063 Lotus japonicus HOM05D004948 ORTHO05D005824 2.4e-61 239.6 159 77.4
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 3.1e-61 239.2 206 61.2
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 5.3e-61 238.4 199 65.3
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 5.3e-61 238.4 178 71.3
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 7.0e-61 238.0 229 57.2
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 1.2e-60 237.3 209 58.9
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 2.0e-60 236.5 229 57.2
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 2.7e-60 236.1 229 55.0
Aa31LG3G9220 Aethionema arabicum HOM05D004948 ORTHO05D005824 7.7e-60 234.6 209 57.9
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 2.2e-59 233.0 229 55.9
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 2.2e-59 233.0 229 55.0
BcaC03g14431 Brassica carinata HOM05D004948 ORTHO05D005824 2.9e-59 232.6 223 57.0
C02p18470 Brassica napus HOM05D004948 ORTHO05D005824 2.9e-59 232.6 223 57.0
BolC2t07987H Brassica oleracea HOM05D004948 ORTHO05D005824 2.9e-59 232.6 223 57.0
Ca_16670_v3 Cicer arietinum L. HOM05D004948 ORTHO05D005824 3.8e-59 232.3 159 74.8
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 5.0e-59 231.9 223 56.5
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 5.0e-59 231.9 223 56.5
CAN.G204.5 Capsicum annuum HOM05D004948 ORTHO05D005824 1.1e-58 230.7 184 65.8
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 4.2e-58 228.8 226 56.6
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 4.2e-58 228.8 226 56.6
Glyma.04G238900 Glycine max HOM05D004948 ORTHO05D005824 5.5e-58 228.4 157 75.8
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 7.2e-58 228.0 203 61.1
Cc02_g01980 Coffea canephora HOM05D004948 ORTHO05D005824 2.7e-57 226.1 160 75.0
Glyma.06G124800 Glycine max HOM05D004948 ORTHO05D005824 2.7e-57 226.1 188 67.0
Psat0s97g0080 Pisum sativum HOM05D004948 ORTHO05D005824 3.6e-57 225.7 157 74.5
TPR.G33862 Trifolium pratense HOM05D004948 ORTHO05D005824 3.6e-57 225.7 157 73.2
Actinidia31860 Actinidia chinensis HOM05D004948 ORTHO05D005824 6.1e-57 224.9 233 57.9
Os01g0621700 Oryza sativa ssp. japonica HOM05D004948 ORTHO05D005824 8.0e-57 224.6 173 63.6
Gohir.A09G183400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 3.0e-56 222.6 207 59.4
Gohir.D09G178100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 8.8e-56 221.1 207 59.4
Gorai.006G200200 Gossypium raimondii HOM05D004948 ORTHO05D005824 8.8e-56 221.1 207 59.4
Phvul.009G135700 Phaseolus vulgaris HOM05D004948 ORTHO05D005824 4.4e-55 218.8 221 58.4
arahy.Tifrunner.gnm1.ann1.NIM4HJ Arachis hypogaea HOM05D004948 ORTHO05D005824 1.4e-53 213.8 159 67.3
Lalb_Chr08g0240671 Lupinus albus HOM05D004948 ORTHO05D005824 3.1e-53 212.6 159 70.4
DCAR_014528 Daucus carota HOM05D000121 ORTHO05D005824 9.1e-53 211.1 157 67.5
VMungo1309G3087 Vigna mungo HOM05D004948 ORTHO05D005824 2.7e-52 209.5 187 59.4
HPP92_024433 Vanilla planifolia HOM05D004948 ORTHO05D005824 3.5e-52 209.1 157 63.7
DCAR_008996 Daucus carota HOM05D002473 ORTHO05D005824 5.9e-52 208.4 176 63.1
arahy.Tifrunner.gnm1.ann1.AMC2P5 Arachis hypogaea HOM05D004948 ORTHO05D005824 1.1e-50 204.1 174 62.1
Medtr3g090670 Medicago truncatula HOM05D004948 ORTHO05D005824 1.5e-50 203.8 147 70.7
CDE04G0161 Ceratophyllum demersum HOM05D004948 ORTHO05D005824 3.3e-50 202.6 178 56.2
unitig_747.g21853 Utricularia gibba HOM05D004948 ORTHO05D005824 1.6e-49 200.3 214 57.0
Actinidia08617 Actinidia chinensis HOM05D004948 ORTHO05D005824 8.0e-49 198.0 146 74.7
TWI39G0355 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 6.8e-48 194.9 139 71.2
Zm00001eb432120 Zea mays HOM05D004948 ORTHO05D005824 6.8e-48 194.9 148 66.2
Mapoly0143s0028 Marchantia polymorpha HOM05D004948 ORTHO05D005824 1.5e-47 193.7 197 51.8
Ah.07g206090 Amaranthus hybridus HOM05D004948 ORTHO05D005824 2.6e-47 193.0 138 69.6
Nitab4.5_0002176g0030 Nicotiana tabacum HOM05D004948 ORTHO05D005824 3.7e-46 189.1 127 76.4
SMO361G0401 Selaginella moellendorffii HOM05D004948 ORTHO05D005824 4.5e-44 182.2 212 48.1
SHI54648 Sapria himalayana HOM05D004948 ORTHO05D005824 5.9e-44 181.8 214 51.4
SHI54754 Sapria himalayana HOM05D004948 ORTHO05D005824 5.9e-44 181.8 214 51.4
CSS0002011 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.0e-43 181.0 120 78.3
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 1.3e-43 180.6 183 52.5
AagrBONN_evm.TU.Sc2ySwM_362.1882 Anthoceros agrestis HOM05D004948 ORTHO05D005824 8.0e-41 171.4 183 47.5
SEGI_09652 Sequoiadendron giganteum HOM05D004948 ORTHO05D005824 8.9e-40 167.9 139 64.7
CSS0025713 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 7.0e-37 158.3 108 75.0
CSS0008262 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.0e-36 156.8 108 74.1
BcaC04g20470 Brassica carinata HOM05D004948 ORTHO05D005824 1.0e-35 154.5 214 44.4
BolC9t57186H Brassica oleracea HOM05D004948 ORTHO05D005824 3.0e-35 152.9 234 42.3
Lj1P1012T60 Lonicera japonica HOM05D004948 ORTHO05D005824 4.3e-34 149.1 110 71.8
CBR_g39340 Chara braunii HOM05D004948 ORTHO05D005824 2.1e-33 146.7 157 47.8
C09p43150 Brassica napus HOM05D004948 ORTHO05D005824 2.8e-33 146.4 224 42.0
Lalb_Chr23g0271431 Lupinus albus HOM05D004948 ORTHO05D005824 1.1e-24 117.9 159 46.5
BcaB08g35692 Brassica carinata HOM05D004948 ORTHO05D005824 1.2e-23 114.4 87 64.4
MCO05G504 Micromonas commoda HOM05D004948 ORTHO05D005824 1.8e-16 90.5 204 30.4
CSS0011379 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 6.6e-11 72.0 91 41.8
CSS0022164 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 6.6e-11 72.0 91 41.8
CSS0007759 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.5e-10 70.1 90 43.3


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