Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0018619 Lotus japonicus HOM05D007827 ORTHO05D009749 9.7e-130 466.8 240 100.0
Psat5g036160 Pisum sativum HOM05D007827 ORTHO05D009749 4.6e-55 218.8 241 54.4
Medtr3g104620 Medicago truncatula HOM05D007827 ORTHO05D009749 2.5e-53 213.0 252 54.0
Lalb_Chr23g0267841 Lupinus albus HOM05D007827 ORTHO05D009749 9.0e-51 204.5 238 53.8
TPR.G3528 Trifolium pratense HOM05D007827 ORTHO05D009749 1.5e-45 187.2 281 46.6
Phvul.009G078700 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 1.4e-40 170.6 242 48.8
Lj5g0025960 Lotus japonicus HOM05D007827 ORTHO05D009749 2.4e-40 169.9 252 49.6
Glyma.14G097100 Glycine max HOM05D007827 ORTHO05D009749 8.2e-36 154.8 266 44.7
Medtr1g015840 Medicago truncatula HOM05D007827 ORTHO05D009749 1.8e-35 153.7 242 47.9
Glyma.04G052400 Glycine max HOM05D007827 ORTHO05D009749 2.4e-35 153.3 212 51.4
VMungo1309G0458 Vigna mungo HOM05D007827 ORTHO05D009749 6.9e-35 151.8 243 46.5
CiPaw.16G027300 Carya illinoinensis HOM05D007827 ORTHO05D009749 1.3e-33 147.5 234 45.3
MELO3C011460.2 Cucumis melo HOM05D007827 ORTHO05D009749 2.5e-32 143.3 228 43.4
ClCG08G010040 Citrullus lanatus HOM05D007827 ORTHO05D009749 4.2e-32 142.5 226 43.8
QL02p000760 Quercus lobata HOM05D007827 ORTHO05D009749 7.1e-32 141.7 226 44.7
Sed0014394 Sechium edule HOM05D007827 ORTHO05D009749 1.2e-31 141.0 224 43.3
TPR.G13014 Trifolium pratense HOM05D007827 ORTHO05D009749 6.0e-31 138.7 271 43.2
CsaV3_6G032200 Cucumis sativus L. HOM05D007827 ORTHO05D009749 1.5e-29 134.0 230 42.2
MD15G1056900 Malus domestica HOM05D007827 ORTHO05D009749 4.3e-29 132.5 250 44.0
Phvul.001G037300 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 1.2e-26 124.4 271 41.3
Psat6g021400 Pisum sativum HOM05D007827 ORTHO05D009749 1.2e-26 124.4 255 42.0
Haze_18158 Corylus avellana HOM05D007827 ORTHO05D009749 8.5e-25 118.2 225 40.9
arahy.Tifrunner.gnm1.ann1.WVJ8VS Arachis hypogaea HOM05D007827 ORTHO05D009749 1.9e-24 117.1 222 41.9
Prupe.1G409500 Prunus persica HOM05D007827 ORTHO05D009749 3.2e-24 116.3 245 39.2
arahy.Tifrunner.gnm1.ann1.S72ULK Arachis hypogaea HOM05D007827 ORTHO05D009749 1.2e-23 114.4 217 42.4
Cpa.g.sc7.157 Carica papaya HOM05D007827 ORTHO05D009749 4.6e-23 112.5 236 35.6
VMungo0647G1789 Vigna mungo HOM05D007827 ORTHO05D009749 4.6e-23 112.5 271 38.4
Sabra06G0174900 Salix brachista HOM05D007827 ORTHO05D009749 6.1e-23 112.1 224 40.6
Sed0025262 Sechium edule HOM05D007827 ORTHO05D009749 1.7e-20 104.0 213 37.1
Potri.006G226200 Populus trichocarpa HOM05D007827 ORTHO05D009749 3.7e-20 102.8 223 39.0
RcHm_v2.0_Chr6g0311201 Rosa chinensis HOM05D007827 ORTHO05D009749 5.3e-19 99.0 261 35.6
FvH4_2g31620 Fragaria vesca HOM05D007827 ORTHO05D009749 2.0e-18 97.1 264 36.7
CAN.G130.10 Capsicum annuum HOM05D007827 ORTHO05D009749 3.4e-18 96.3 227 31.3
FAN24G3029 Fragaria x ananassa HOM05D007827 ORTHO05D009749 4.5e-18 95.9 265 37.0
Rhsim11G0042400 Rhododendron simsii HOM05D007827 ORTHO05D009749 5.9e-18 95.5 237 35.0
CSS0031213 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.1e-16 91.3 235 32.3
Manes.16G082000 Manihot esculenta HOM05D007827 ORTHO05D009749 5.5e-16 89.0 218 37.2
Aqoxy7G01166 Aquilegia oxysepala HOM05D007827 ORTHO05D009749 7.2e-16 88.6 228 34.2
Solyc06g011440.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 1.6e-15 87.4 217 32.3
FAN15G3566 Fragaria x ananassa HOM05D007827 ORTHO05D009749 2.7e-15 86.7 263 35.4
CSS0026056 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 3.6e-15 86.3 218 34.4
Sopen06g006480 Solanum pennellii HOM05D007827 ORTHO05D009749 6.1e-15 85.5 217 31.8
arahy.Tifrunner.gnm1.ann1.EI9IQY Arachis hypogaea HOM05D007827 ORTHO05D009749 1.0e-14 84.7 180 38.9
Nitab4.5_0007177g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.4e-14 84.3 227 31.3
Nitab4.5_0000972g0020 Nicotiana tabacum HOM05D007827 ORTHO05D009749 3.0e-14 83.2 230 33.0
Thecc.09G056900 Theobroma cacao HOM05D007827 ORTHO05D009749 1.5e-13 80.9 235 34.5
Dinv28003 Davidia involucrata HOM05D007827 ORTHO05D009749 2.0e-13 80.5 229 32.3
Cc08_g10870 Coffea canephora HOM05D007827 ORTHO05D009749 1.7e-12 77.4 263 30.0
Atru.chr7.1942 Acer truncatum HOM05D007827 ORTHO05D009749 2.8e-12 76.6 99 48.5
Peaxi162Scf01001g00001 Petunia axillaris HOM05D007827 ORTHO05D009749 2.8e-12 76.6 227 30.8
Hma1.2p1_0801F.1_g220250 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 4.8e-12 75.9 242 33.1
Peaxi162Scf00297g00062 Petunia axillaris HOM05D007827 ORTHO05D009749 6.3e-12 75.5 228 30.3
Gorai.009G043700 Gossypium raimondii HOM05D007827 ORTHO05D009749 8.2e-12 75.1 204 35.8
Actinidia01227 Actinidia chinensis HOM05D007827 ORTHO05D009749 1.8e-11 73.9 228 31.6
Gohir.D05G042650 Gossypium hirsutum HOM05D007827 ORTHO05D009749 1.8e-11 73.9 204 34.8
Nitab4.5_0002039g0090 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.8e-11 73.9 247 28.7
TAR626G1076 Trochodendron aralioides HOM05D007827 ORTHO05D009749 3.1e-11 73.2 224 31.7
FAN27G2967 Fragaria x ananassa HOM05D007827 ORTHO05D009749 2.0e-10 70.5 164 38.4
CSS0004361 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 2.6e-10 70.1 255 29.0
Migut.A00115 Erythranthe guttata HOM05D007827 ORTHO05D009749 2.6e-10 70.1 77 53.2
Hma1.2p1_1933F.1_g308040 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 4.5e-10 69.3 247 31.6
Nitab4.5_0007037g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.3e-09 67.8 247 28.3
CSS0037057 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 2.9e-09 66.6 210 29.0
Oeu018628.1 Olea europaea HOM05D007827 ORTHO05D009749 2.9e-09 66.6 226 30.5
SalBow4G1896 Salvia bowleyana HOM05D007827 ORTHO05D009749 1.1e-08 64.7 138 34.8
PGSC0003DMG400029878 Solanum tuberosum HOM05D007827 ORTHO05D009749 1.1e-08 64.7 217 26.7
MBI04_g36906_MAGBIO Magnolia biondii HOM05D007827 ORTHO05D009749 1.4e-08 64.3 229 31.4
PGSC0003DMG400008199 Solanum tuberosum HOM05D007827 ORTHO05D009749 2.5e-08 63.5 241 27.0
Ciclev10010468m.g Citrus clementina HOM05D007827 ORTHO05D009749 3.2e-08 63.2 198 31.8
COL.COLO4_08756 Corchorus olitorius HOM05D030950 ORTHO05D009749 5.5e-08 62.4 238 30.7
Oeu047101.1 Olea europaea HOM05D007827 ORTHO05D009749 7.2e-08 62.0 62 56.5
ECA240G3049 Erigeron canadensis HOM05D007827 ORTHO05D009749 2.1e-07 60.5 82 43.9
SGA_v2.0_scaffold20G09207 Striga asiatica HOM05D007827 ORTHO05D009749 4.7e-07 59.3 65 47.7
unitig_37.g12945 Utricularia gibba HOM05D007827 ORTHO05D009749 1.8e-06 57.4 75 45.3
THA.LOC104799160 Tarenaya hassleriana HOM05D007827 ORTHO05D009749 5.2e-06 55.8 203 29.1
Solyc08g062840.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 6.7e-06 55.5 241 24.9


User provided reference genes

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