Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0018578 Lotus japonicus HOM05D006273 ORTHO05D007607 4.3e-134 481.5 269 100.0
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 1.1e-60 237.7 288 54.9
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 7.2e-57 224.9 280 55.4
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 2.7e-56 223.0 258 56.2
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 4.7e-56 222.2 306 51.3
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 3.7e-53 212.6 208 60.1
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 3.5e-51 206.1 293 51.5
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 4.5e-51 205.7 302 50.7
Ca_11032_v3 Cicer arietinum L. HOM05D006273 ORTHO05D007607 1.0e-50 204.5 186 63.4
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 6.1e-48 195.3 239 54.0
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 6.1e-48 195.3 313 46.3
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 1.0e-47 194.5 329 46.8
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 1.4e-47 194.1 324 44.4
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 8.8e-47 191.4 325 44.9
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 6.3e-45 185.3 302 44.7
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 8.0e-40 168.3 277 48.7
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 1.0e-34 151.4 321 38.0
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 2.9e-34 149.8 278 45.3
TPR.G8308 Trifolium pratense HOM05D006273 ORTHO05D007607 3.8e-34 149.4 194 51.5
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 3.0e-31 139.8 318 39.0
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 6.8e-31 138.7 325 35.4
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 6.8e-31 138.7 335 36.7
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 2.0e-30 137.1 325 35.1
Psat4g227520 Pisum sativum HOM05D006273 ORTHO05D007607 7.5e-30 135.2 176 53.4
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 1.3e-29 134.4 246 41.1
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 2.2e-29 133.7 325 34.8
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 2.8e-29 133.3 255 39.2
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 4.9e-29 132.5 321 36.1
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 1.1e-28 131.3 321 34.6
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 5.4e-28 129.0 318 35.5
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 1.6e-27 127.5 314 35.7
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 2.0e-27 127.1 321 33.6
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 3.5e-27 126.3 323 35.0
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 4.5e-27 125.9 246 40.2
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 2.3e-26 123.6 341 34.0
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 1.5e-25 120.9 314 34.4
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 4.3e-25 119.4 206 39.8
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 4.7e-24 115.9 326 33.4
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 4.7e-24 115.9 329 35.6
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 4.7e-24 115.9 258 37.6
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 1.4e-23 114.4 250 36.8
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 1.4e-23 114.4 246 35.8
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 3.0e-23 113.2 229 38.0
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 4.0e-23 112.8 320 32.5
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 5.2e-23 112.5 202 42.1
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 8.9e-23 111.7 245 35.5
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 2.0e-22 110.5 323 33.4
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 3.4e-22 109.8 241 34.9
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 5.7e-22 109.0 210 39.0
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 7.5e-22 108.6 260 35.4
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 7.5e-22 108.6 260 35.4
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.3e-21 107.8 322 32.0
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.9e-21 106.7 322 33.2
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 8.3e-21 105.1 270 34.8
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 4.1e-20 102.8 311 32.8
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 9.2e-20 101.7 218 35.3
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 1.2e-19 101.3 331 31.7
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 1.2e-19 101.3 238 37.0
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 2.7e-19 100.1 218 35.8
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 2.7e-19 100.1 253 37.2
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 2.7e-19 100.1 211 38.9
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 2.7e-19 100.1 192 38.0
Potri.001G295000 Populus trichocarpa HOM05D006273 ORTHO05D007607 4.6e-19 99.4 144 43.8
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 5.9e-19 99.0 253 33.6
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 7.8e-19 98.6 297 34.0
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 7.8e-19 98.6 213 38.0
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 7.8e-19 98.6 300 31.3
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 1.0e-18 98.2 264 33.7
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 1.3e-18 97.8 257 35.0
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 1.3e-18 97.8 269 33.8
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 3.0e-18 96.7 260 35.0
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 3.0e-18 96.7 261 35.6
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 3.9e-18 96.3 215 36.7
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 6.6e-18 95.5 269 34.2
Hund24138 Selenicereus undatus HOM05D006273 ORTHO05D007607 1.1e-17 94.7 206 36.9
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 2.5e-17 93.6 270 35.9
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 4.3e-17 92.8 245 34.7
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 4.3e-17 92.8 241 36.1
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 3.6e-16 89.7 230 36.1
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 1.4e-15 87.8 245 32.2
Nitab4.5_0001105g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 1.4e-15 87.8 143 44.8
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 6.8e-15 85.5 323 28.8
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 6.8e-15 85.5 206 32.5
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 4.9e-13 79.3 243 33.7
AUR62044228 Chenopodium quinoa HOM05D006273 ORTHO05D007607 6.4e-13 79.0 143 37.8
TWI59G0086 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 7.0e-12 75.5 139 41.0
CDE04G2504 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 7.8e-11 72.0 153 37.9
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 7.8e-11 72.0 311 32.2
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 2.3e-10 70.5 258 34.5
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 2.5e-09 67.0 247 32.8
Medtr5g005040 Medicago truncatula HOM05D006273 ORTHO05D007607 2.5e-09 67.0 169 37.3
AUR62017546 Chenopodium quinoa HOM05D006273 ORTHO05D007607 3.3e-09 66.6 199 28.1
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 4.3e-09 66.2 220 31.8
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 4.3e-09 66.2 220 31.8
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 5.6e-09 65.9 301 32.2
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 1.2e-08 64.7 240 31.2
CDE02G4649 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 3.6e-08 63.2 249 30.1
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 6.2e-08 62.4 279 30.1
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 8.1e-08 62.0 288 32.3
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 1.1e-07 61.6 308 30.5
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 1.4e-07 61.2 274 30.3
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 1.8e-07 60.8 256 31.6
AL3G33090 Arabidopsis lyrata HOM05D006273 ORTHO05D007607 2.3e-07 60.5 148 39.9
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 2.3e-07 60.5 265 31.3
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 5.2e-07 59.3 213 28.6
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 6.8e-07 58.9 246 30.5
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 6.8e-07 58.9 317 30.0
Aqoxy6G02626 Aquilegia oxysepala HOM05D002857 ORTHO05D007919 4.4e-06 56.2 234 29.9
AUR62025214 Chenopodium quinoa HOM05D000052 ORTHO05D007607 9.9e-06 55.1 201 26.9


User provided reference genes

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