Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0018189 Lotus japonicus HOM05D004062 ORTHO05D004417 2.9e-55 218.4 116 100.0
VMungo1383G2158 Vigna mungo HOM05D004062 ORTHO05D004417 2.6e-24 115.5 137 51.1
Medtr7g082750 Medicago truncatula HOM05D004062 ORTHO05D004417 7.7e-24 114.0 136 55.9
Glyma.18G293500 Glycine max HOM05D004062 ORTHO05D004417 2.2e-23 112.5 138 50.0
Psat3g097280 Pisum sativum HOM05D004062 ORTHO05D004417 5.0e-23 111.3 136 49.3
Lalb_Chr17g0335981 Lupinus albus HOM05D004062 ORTHO05D004417 1.9e-22 109.4 142 47.9
Glyma.02G089500 Glycine max HOM05D004062 ORTHO05D004417 9.4e-22 107.1 141 48.9
Lalb_Chr04g0257671 Lupinus albus HOM05D004062 ORTHO05D004417 2.1e-21 105.9 133 48.9
Phvul.008G008800 Phaseolus vulgaris HOM05D004062 ORTHO05D004417 3.6e-21 105.1 137 46.0
arahy.Tifrunner.gnm1.ann1.56V7KA Arachis hypogaea HOM05D004062 ORTHO05D004417 1.0e-20 103.6 147 47.6
arahy.Tifrunner.gnm1.ann1.RE711V Arachis hypogaea HOM05D004062 ORTHO05D004417 1.0e-20 103.6 147 47.6
Glyma.18G293600 Glycine max HOM05D004062 ORTHO05D004417 4.0e-20 101.7 140 50.0
Medtr7g082760 Medicago truncatula HOM05D004062 ORTHO05D004417 6.8e-20 100.9 133 47.4
Lj1g0017758 Lotus japonicus HOM05D004062 ORTHO05D004417 1.2e-19 100.1 144 49.3
TPR.G16541 Trifolium pratense HOM05D004062 ORTHO05D004417 1.3e-18 96.7 134 46.3
Ca_08097_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 4.8e-18 94.7 134 47.0
Glyma.02G089400 Glycine max HOM05D004062 ORTHO05D004417 6.3e-18 94.4 139 46.0
Psat3g097240 Pisum sativum HOM05D004062 ORTHO05D004417 6.3e-18 94.4 128 46.9
TPR.G11392 Trifolium pratense HOM05D004062 ORTHO05D004417 1.4e-17 93.2 120 45.0
arahy.Tifrunner.gnm1.ann1.95RUG0 Arachis hypogaea HOM05D004062 ORTHO05D004417 1.8e-17 92.8 133 45.9
arahy.Tifrunner.gnm1.ann1.EB5M6E Arachis hypogaea HOM05D004062 ORTHO05D004417 1.8e-17 92.8 133 45.9
Lj1g0013725 Lotus japonicus HOM05D004062 ORTHO05D004417 1.8e-17 92.8 140 45.0
Lj1g0027246 Lotus japonicus HOM05D004062 ORTHO05D004417 2.7e-16 89.0 143 44.8
VMungo1383G0607 Vigna mungo HOM05D004062 ORTHO05D004417 3.2e-14 82.0 140 40.7
Medtr7g082730 Medicago truncatula HOM05D004062 ORTHO05D004417 4.2e-14 81.6 128 41.4
Ca_08095_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 5.5e-14 81.3 126 41.3
Ca_08096_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 5.5e-14 81.3 127 40.2
Medtr7g082700 Medicago truncatula HOM05D004062 ORTHO05D004417 1.2e-13 80.1 130 41.5
Medtr7g082740 Medicago truncatula HOM05D004062 ORTHO05D004417 1.2e-13 80.1 130 41.5
Psat3g097360 Pisum sativum HOM05D004062 ORTHO05D004417 1.2e-13 80.1 125 40.8
Phvul.008G008700 Phaseolus vulgaris HOM05D004062 ORTHO05D004417 4.0e-12 75.1 138 37.7
Haze_14190 Corylus avellana HOM05D004062 ORTHO05D004417 1.5e-11 73.2 137 40.9
TPR.G16550 Trifolium pratense HOM05D004062 ORTHO05D004417 1.5e-11 73.2 129 43.4
TPR.G16561 Trifolium pratense HOM05D004062 ORTHO05D004417 2.6e-11 72.4 130 45.4
Dinv34790 Davidia involucrata HOM05D002710 ORTHO05D002905 4.8e-10 68.2 138 36.2
Thecc.04G128000 Theobroma cacao HOM05D004062 ORTHO05D004417 1.4e-09 66.6 125 36.8
CiPaw.04G044300 Carya illinoinensis HOM05D004062 ORTHO05D004417 9.1e-09 63.9 134 35.8
COL.COLO4_09380 Corchorus olitorius HOM05D004062 ORTHO05D004417 2.0e-08 62.8 136 35.3
Gohir.D11G172800 Gossypium hirsutum HOM05D004062 ORTHO05D004417 7.7e-08 60.8 119 34.5
Rhsim10G0073300 Rhododendron simsii HOM05D004062 ORTHO05D004417 1.0e-07 60.5 137 31.4
CSS0019285 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 1.3e-07 60.1 134 34.3
CSS0038275 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 1.3e-07 60.1 134 34.3
Gohir.D11G172400 Gossypium hirsutum HOM05D004062 ORTHO05D004417 1.3e-07 60.1 119 34.5
QL02p050215 Quercus lobata HOM05D004062 ORTHO05D004417 1.7e-07 59.7 135 36.3
Gorai.007G185100 Gossypium raimondii HOM05D004062 ORTHO05D004417 2.9e-07 58.9 119 33.6
Psat3g097320 Pisum sativum HOM05D004062 ORTHO05D004417 2.9e-07 58.9 124 37.9
Duzib138G0221 Durio zibethinus HOM05D004062 ORTHO05D004417 3.8e-07 58.5 126 34.9
CiPaw.03G065300 Carya illinoinensis HOM05D004062 ORTHO05D004417 5.0e-07 58.2 136 33.8
Dinv33967 Davidia involucrata HOM05D004062 ORTHO05D004417 1.1e-06 57.0 123 36.6
Potri.017G119800 Populus trichocarpa HOM05D004062 ORTHO05D004417 1.9e-06 56.2 125 32.0
Gohir.A11G166400 Gossypium hirsutum HOM05D004062 ORTHO05D004417 2.5e-06 55.8 125 32.0
TAR629G2241 Trochodendron aralioides HOM05D004062 ORTHO05D004417 2.5e-06 55.8 125 39.2
TAR622G0216 Trochodendron aralioides HOM05D004062 ORTHO05D004417 3.3e-06 55.5 129 32.6


User provided reference genes

Program Settings