Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0017631 Lotus japonicus HOM05D006327 ORTHO05D007952 2.7e-175 618.6 331 100.0
Glyma.06G188300 Glycine max HOM05D006327 ORTHO05D007952 1.3e-97 360.5 351 63.5
Lalb_Chr11g0071521 Lupinus albus HOM05D006327 ORTHO05D007952 2.5e-96 356.3 353 62.0
Glyma.04G176800 Glycine max HOM05D006327 ORTHO05D007952 9.7e-96 354.4 353 65.2
Medtr0168s0110 Medicago truncatula HOM05D006327 ORTHO05D007952 2.4e-94 349.7 352 64.2
VMungo1309G2881 Vigna mungo HOM05D006327 ORTHO05D007952 6.5e-92 341.7 350 61.7
TPR.G11929 Trifolium pratense HOM05D006327 ORTHO05D007952 9.4e-91 337.8 336 65.8
Phvul.009G183700 Phaseolus vulgaris HOM05D006327 ORTHO05D007952 5.7e-88 328.6 347 61.1
arahy.Tifrunner.gnm1.ann1.RDR8CP Arachis hypogaea HOM05D006327 ORTHO05D007952 2.2e-87 326.6 367 59.9
arahy.Tifrunner.gnm1.ann1.Y9A7HY Arachis hypogaea HOM05D006327 ORTHO05D007952 4.8e-87 325.5 372 58.9
Cfa019028 Carpinus fangiana HOM05D006327 ORTHO05D007952 1.4e-78 297.4 363 53.4
Haze_07403 Corylus avellana HOM05D006327 ORTHO05D007952 1.3e-76 290.8 369 54.2
RcHm_v2.0_Chr7g0180141 Rosa chinensis HOM05D006327 ORTHO05D007952 2.2e-76 290.0 366 53.8
FAN04G1419 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.6e-74 283.9 361 53.7
QL10p014464 Quercus lobata HOM05D006327 ORTHO05D007952 1.0e-73 281.2 367 51.2
FAN13G1795 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.4e-73 280.8 359 52.1
FvH4_5g15910 Fragaria vesca HOM05D006327 ORTHO05D007952 1.8e-73 280.4 367 55.9
MD06G1184600 Malus domestica HOM05D006327 ORTHO05D007952 1.8e-73 280.4 369 53.4
Thecc.K0000500 Theobroma cacao HOM05D006327 ORTHO05D007952 2.0e-72 276.9 357 52.4
Gohir.D13G092100 Gossypium hirsutum HOM05D006327 ORTHO05D007952 4.4e-72 275.8 354 52.0
FAN08G2893 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.7e-71 273.9 362 51.7
Gorai.010G139000 Gossypium raimondii HOM05D006327 ORTHO05D007952 3.7e-71 272.7 369 49.9
Potri.012G072600 Populus trichocarpa HOM05D006327 ORTHO05D007952 1.1e-70 271.2 367 50.4
Duzib205G1023 Durio zibethinus HOM05D006327 ORTHO05D007952 1.4e-70 270.8 360 51.7
Prupe.5G183400 Prunus persica HOM05D006327 ORTHO05D007952 2.4e-70 270.0 374 50.5
FAN18G0307 Fragaria x ananassa HOM05D006327 ORTHO05D007952 4.1e-70 269.2 363 50.7
Gohir.A13G087700 Gossypium hirsutum HOM05D006327 ORTHO05D007952 4.1e-70 269.2 357 50.7
Actinidia34971 Actinidia chinensis HOM05D006327 ORTHO05D007952 7.0e-70 268.5 382 51.3
Manes.14G072700 Manihot esculenta HOM05D006327 ORTHO05D007952 2.7e-69 266.5 381 50.1
TWI81G1080 Tripterygium wilfordii HOM05D006327 ORTHO05D007952 3.5e-69 266.2 341 54.3
Ciclev10020740m.g Citrus clementina HOM05D006327 ORTHO05D007952 4.5e-69 265.8 377 48.8
CsaV3_1G001980 Cucumis sativus L. HOM05D006327 ORTHO05D007952 1.0e-68 264.6 373 49.9
Sed0003639 Sechium edule HOM05D006327 ORTHO05D007952 1.1e-67 261.2 353 53.5
GSVIVG01008091001 Vitis vinifera HOM05D006327 ORTHO05D007952 1.1e-67 261.2 378 49.2
CSS0041426 Camellia sinensis var. sinensis HOM05D006327 ORTHO05D007952 1.5e-67 260.8 373 50.4
ClCG06G016530 Citrullus lanatus HOM05D006327 ORTHO05D007952 3.2e-67 259.6 377 51.5
Hund09383 Selenicereus undatus HOM05D006327 ORTHO05D007952 3.0e-65 253.1 356 49.7
AUR62008321 Chenopodium quinoa HOM05D006327 ORTHO05D007952 5.2e-65 252.3 340 52.1
MD14G1190500 Malus domestica HOM05D006327 ORTHO05D007952 5.2e-65 252.3 374 49.7
Lj9A456G27 Lonicera japonica HOM05D006327 ORTHO05D007952 5.7e-64 248.8 376 48.4
vmacro16576 Vaccinium macrocarpon HOM05D006327 ORTHO05D007952 9.8e-64 248.1 372 48.7
Hma1.2p1_0572F.1_g181140 Hydrangea macrophylla HOM05D006327 ORTHO05D007952 1.7e-63 247.3 361 52.4
Psat5g181760 Pisum sativum HOM05D006327 ORTHO05D007952 2.8e-63 246.5 273 59.0
COL.COLO4_21256 Corchorus olitorius HOM05D006327 ORTHO05D007952 3.7e-63 246.1 382 47.9
EL10Ac5g10880 Beta vulgaris HOM05D006327 ORTHO05D007952 8.3e-63 245.0 371 48.5
TAR629G2492 Trochodendron aralioides HOM05D006327 ORTHO05D007952 1.1e-62 244.6 382 46.1
MELO3C017142.2 Cucumis melo HOM05D006327 ORTHO05D007952 4.1e-62 242.7 435 44.6
DCAR_021548 Daucus carota HOM05D006327 ORTHO05D007952 3.5e-61 239.6 334 49.1
Nitab4.5_0000003g0110 Nicotiana tabacum HOM05D006327 ORTHO05D007952 9.5e-59 231.5 347 48.7
Nitab4.5_0000758g0030 Nicotiana tabacum HOM05D006327 ORTHO05D007952 1.6e-58 230.7 350 48.3
Eucgr.B00389 Eucalyptus grandis HOM05D006327 ORTHO05D007952 6.1e-58 228.8 365 46.8
DCAR_016525 Daucus carota HOM05D006327 ORTHO05D007952 4.0e-57 226.1 342 47.7
Peaxi162Scf00689g00562 Petunia axillaris HOM05D006327 ORTHO05D007952 1.5e-56 224.2 353 47.3
Nn4g22987 Nelumbo nucifera HOM05D006327 ORTHO05D007952 8.3e-55 218.4 408 42.6
Ah.02g112960 Amaranthus hybridus HOM05D006327 ORTHO05D007952 5.4e-54 215.7 352 48.6
AUR62021775 Chenopodium quinoa HOM05D006327 ORTHO05D007952 3.5e-53 213.0 343 49.0
PGSC0003DMG400033064 Solanum tuberosum HOM05D006327 ORTHO05D007952 7.7e-53 211.8 339 49.3
Solyc06g071170.4 Solanum lycopersicum HOM05D006327 ORTHO05D007952 1.3e-52 211.1 346 47.1
Sopen06g027480 Solanum pennellii HOM05D006327 ORTHO05D007952 2.9e-52 209.9 339 48.4
Lsat_1_v5_gn_5_17580 Lactuca sativa HOM05D006327 ORTHO05D007952 3.8e-52 209.5 378 45.2
CANSAT80G2449 Cannabis sativa HOM05D006327 ORTHO05D007952 5.0e-52 209.1 459 41.2
Migut.I00102 Erythranthe guttata HOM05D006327 ORTHO05D007952 1.6e-50 204.1 360 42.8
THA.LOC104818247 Tarenaya hassleriana HOM05D006327 ORTHO05D007952 1.5e-48 197.6 356 43.0
PGR083G2875 Punica granatum HOM05D006327 ORTHO05D007952 3.4e-48 196.4 300 50.3
AT3G47850 Arabidopsis thaliana HOM05D006327 ORTHO05D007952 2.4e-46 190.3 348 42.8
Cc04_g16010 Coffea canephora HOM05D006327 ORTHO05D007952 5.4e-46 189.1 406 41.6
AL5G27170 Arabidopsis lyrata HOM05D006327 ORTHO05D007952 2.0e-45 187.2 351 41.9
Sabra12G0051800 Salix brachista HOM05D006327 ORTHO05D007952 4.6e-45 186.0 301 45.8
HanXRQChr02g0045371 Helianthus annuus HOM05D006327 ORTHO05D007952 5.9e-45 185.7 341 44.3
Carub.0005s1399 Capsella rubella HOM05D006327 ORTHO05D007952 7.8e-45 185.3 353 41.6
Sp5g14110 Schrenkiella parvula HOM05D006327 ORTHO05D007952 2.3e-44 183.7 358 41.1
Rhsim12G0160300 Rhododendron simsii HOM05D006327 ORTHO05D007952 6.6e-44 182.2 316 43.0
CiPaw.12G020800 Carya illinoinensis HOM05D006327 ORTHO05D007952 1.9e-43 180.6 321 46.1
BcaB01g00870 Brassica carinata HOM05D006327 ORTHO05D007952 3.3e-43 179.9 353 41.1
SGA_v2.0_scaffold56G20076 Striga asiatica HOM05D006327 ORTHO05D007952 5.6e-43 179.1 381 40.2
BcaC01g01770 Brassica carinata HOM05D006327 ORTHO05D007952 1.4e-41 174.5 354 40.1
BolC3t19506H Brassica oleracea HOM05D006327 ORTHO05D007952 1.4e-41 174.5 354 40.1
C03p72080 Brassica napus HOM05D006327 ORTHO05D007952 4.0e-41 172.9 350 42.9
BolC1t03192H Brassica oleracea HOM05D006327 ORTHO05D007952 8.9e-41 171.8 345 40.9
PSO832G2780 Papaver somniferum HOM05D006327 ORTHO05D007952 2.0e-40 170.6 406 37.4
CARHR156550 Cardamine hirsuta HOM05D006327 ORTHO05D007952 2.6e-40 170.2 349 41.0
A06p19780 Brassica napus HOM05D006327 ORTHO05D007952 7.5e-40 168.7 357 39.5
BraA06t25057Z Brassica rapa HOM05D006327 ORTHO05D007952 7.5e-40 168.7 357 39.5
CDE06G0071 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 7.0e-38 162.2 351 41.3
Aqoxy3G03193 Aquilegia oxysepala HOM05D006327 ORTHO05D007952 9.2e-38 161.8 423 34.8
PSO591G0157 Papaver somniferum HOM05D006327 ORTHO05D007952 9.2e-38 161.8 414 36.0
ECA247G1897 Erigeron canadensis HOM05D006327 ORTHO05D007881 1.7e-36 157.5 324 42.0
Hund02693 Selenicereus undatus HOM05D006327 ORTHO05D007952 2.3e-36 157.1 338 39.9
Thhalv10010485m.g Eutrema salsugineum HOM05D006327 ORTHO05D007952 1.4e-33 147.9 282 38.7
Sed0027580 Sechium edule HOM05D006327 ORTHO05D007952 2.3e-33 147.1 281 43.4
Sc12g0005950 Simmondsia chinensis HOM05D006327 ORTHO05D007952 4.9e-31 139.4 387 35.1
HPP92_015937 Vanilla planifolia HOM05D006327 ORTHO05D007952 3.9e-28 129.8 350 37.1
SGA_v2.0_scaffold25G10883 Striga asiatica HOM05D006327 ORTHO05D007952 1.1e-27 128.3 354 36.2
Aa31LG4G16510 Aethionema arabicum HOM05D006327 ORTHO05D007952 1.5e-27 127.9 368 33.7
Dinv19897 Davidia involucrata HOM05D006327 ORTHO05D007952 2.5e-27 127.1 331 33.8
Os05g0220900 Oryza sativa ssp. japonica HOM05D006327 ORTHO05D007952 3.3e-27 126.7 355 32.4
HPP92_015918 Vanilla planifolia HOM05D006327 ORTHO05D007952 4.3e-27 126.3 353 34.8
BcaB05g23082 Brassica carinata HOM05D006327 ORTHO05D007952 5.6e-27 125.9 311 37.0
Zm00001eb053670 Zea mays HOM05D006327 ORTHO05D007952 4.0e-25 119.8 343 33.5
Atru.chr9.2360 Acer truncatum HOM05D006327 ORTHO05D007952 5.8e-24 115.9 179 49.7
unitig_61.g26481 Utricularia gibba HOM05D006327 ORTHO05D007952 2.2e-23 114.0 371 31.8
CDE08G0244 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 4.9e-23 112.8 244 41.8
Actinidia19065 Actinidia chinensis HOM05D006327 ORTHO05D007952 5.6e-19 99.4 310 34.8
SEGI_36963 Sequoiadendron giganteum HOM05D006327 ORTHO05D007952 5.2e-17 92.8 345 29.3
Cpa.g.c28309.3 Carica papaya HOM05D006327 ORTHO05D007952 3.8e-15 86.7 45 86.7
Cpa.g.sc939.1 Carica papaya HOM05D006327 ORTHO05D007952 2.1e-13 80.9 67 67.2
Nn5g29700 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.1e-13 80.9 57 71.9
Nn4g25043 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.7e-13 80.5 57 71.9
Nn5g29485 Nelumbo nucifera HOM05D006327 ORTHO05D007952 6.0e-13 79.3 57 70.2
Sc12g0005960 Simmondsia chinensis HOM05D006327 ORTHO05D007952 1.0e-12 78.6 45 77.8
Nn1g09464 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.3e-12 77.4 52 73.1
Nn2g11504 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.9e-12 76.6 57 68.4
Nn2g11507 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.9e-12 76.6 57 68.4
Nn1g07420 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.1e-11 75.1 57 68.4
Nn5g29803 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.9e-11 74.3 159 37.1
SMO361G0693 Selaginella moellendorffii HOM05D006327 ORTHO05D007952 2.1e-10 70.9 184 27.2
Nn6g34101 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.8e-10 70.5 158 36.1
ATR0665G641 Amborella trichopoda HOM05D006327 ORTHO05D007952 6.2e-10 69.3 45 66.7
SMO361G0449 Selaginella moellendorffii HOM05D063101 ORTHO05D007952 1.7e-07 61.2 186 26.3
ATR0665G137 Amborella trichopoda HOM05D006327 ORTHO05D007952 8.4e-07 58.9 142 37.3
Oeu035426.1 Olea europaea HOM05D006327 ORTHO05D007952 4.2e-06 56.6 140 32.1


User provided reference genes

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