Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0017625 Lotus japonicus HOM05D007410 ORTHO05D009500 2.3e-135 487.3 780 100.0
Glyma.03G190300 Glycine max HOM05D007410 ORTHO05D009500 8.7e-71 272.7 772 83.9
VMungo1383G0444 Vigna mungo HOM05D007410 ORTHO05D009500 1.1e-60 239.2 776 79.1
Phvul.001G185900 Phaseolus vulgaris HOM05D007410 ORTHO05D009500 1.5e-59 235.3 774 79.7
Psat2g007640 Pisum sativum HOM05D007410 ORTHO05D009500 1.2e-56 225.7 774 79.8
Glyma.19G190667 Glycine max HOM05D007410 ORTHO05D009500 2.3e-55 221.5 363 74.7
Medtr7g103600 Medicago truncatula HOM05D007410 ORTHO05D009500 4.8e-45 187.2 773 77.7
TPR.G28359 Trifolium pratense HOM05D007410 ORTHO05D009500 2.2e-37 161.8 793 69.4
Lalb_Chr01g0018371 Lupinus albus HOM05D007410 ORTHO05D009500 1.2e-35 156.0 363 47.1
Glyma.19G190733 Glycine max HOM05D007410 ORTHO05D009500 2.1e-32 145.2 161 85.1
Ca_08961_v3 Cicer arietinum L. HOM05D007410 ORTHO05D009500 3.6e-32 144.4 161 85.1
Nitab4.5_0005621g0120 Nicotiana tabacum HOM05D007410 ORTHO05D009500 3.5e-19 101.3 168 69.6
MD14G1014400 Malus domestica HOM05D007410 ORTHO05D009500 5.9e-19 100.5 163 69.9
Dinv34010 Davidia involucrata HOM05D007410 ORTHO05D009500 2.9e-18 98.2 117 47.9
FAN05G1927 Fragaria x ananassa HOM05D007410 ORTHO05D009500 5.0e-18 97.4 163 66.3
CANSAT80G0494 Cannabis sativa HOM05D007410 ORTHO05D009500 1.5e-17 95.9 160 69.4
MD12G1016300 Malus domestica HOM05D007410 ORTHO05D009500 1.9e-17 95.5 117 47.9
FAN02G1401 Fragaria x ananassa HOM05D007410 ORTHO05D009500 3.3e-17 94.7 124 48.4
FvH4_6g17750 Fragaria vesca HOM05D007410 ORTHO05D009500 4.2e-17 94.4 163 65.6
FAN14G2442 Fragaria x ananassa HOM05D007410 ORTHO05D009500 4.2e-17 94.4 163 65.6
Prupe.7G119000 Prunus persica HOM05D007410 ORTHO05D009500 7.2e-17 93.6 117 47.0
QL02p025248 Quercus lobata HOM05D007410 ORTHO05D009500 9.5e-17 93.2 114 47.4
RcHm_v2.0_Chr3g0471971 Rosa chinensis HOM05D007410 ORTHO05D009500 9.5e-17 93.2 117 47.0
Haze_19526 Corylus avellana HOM05D007410 ORTHO05D009500 1.2e-16 92.8 124 45.2
FAN09G0790 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.6e-16 92.4 163 65.0
CSS0026121 Camellia sinensis var. sinensis HOM05D007410 ORTHO05D009500 2.1e-16 92.0 163 65.0
PGSC0003DMG400004719 Solanum tuberosum HOM05D007410 ORTHO05D009500 2.1e-16 92.0 161 65.2
TWI60G0552 Tripterygium wilfordii HOM05D007410 ORTHO05D009500 2.1e-16 92.0 133 41.4
Hma1.2p1_0084F.1_g043130 Hydrangea macrophylla HOM05D007410 ORTHO05D009500 3.6e-16 91.3 163 66.9
Dinv39608 Davidia involucrata HOM05D007410 ORTHO05D009500 4.7e-16 90.9 163 61.3
TAR365G0607 Trochodendron aralioides HOM05D007410 ORTHO05D009500 4.7e-16 90.9 127 43.3
Nitab4.5_0026813g0010 Nicotiana tabacum HOM05D007410 ORTHO05D009500 3.0e-15 88.2 168 65.5
CAN.G575.91 Capsicum annuum HOM05D007410 ORTHO05D009500 6.8e-15 87.0 163 65.0
Potri.010G249800 Populus trichocarpa HOM05D007410 ORTHO05D009500 8.9e-15 86.7 153 71.2
Cfa016527 Carpinus fangiana HOM05D007410 ORTHO05D009500 4.4e-14 84.3 124 41.9
Sabra10G0194300 Salix brachista HOM05D001909 ORTHO05D007079 4.4e-14 84.3 154 70.1
PGR004G1775 Punica granatum HOM05D007410 ORTHO05D009500 2.2e-13 82.0 157 36.9
FAN09G1720 Fragaria x ananassa HOM05D007410 ORTHO05D009500 3.7e-13 81.3 109 45.9
Solyc12g099840.1 Solanum lycopersicum HOM05D007410 ORTHO05D009500 3.7e-13 81.3 148 68.2
Sed0018174 Sechium edule HOM05D007410 ORTHO05D009500 8.3e-13 80.1 158 65.2
DCAR_013956 Daucus carota HOM05D007410 ORTHO05D009500 1.8e-12 79.0 119 39.5
Eucgr.A01557 Eucalyptus grandis HOM05D007410 ORTHO05D009500 1.8e-12 79.0 114 43.0
Oeu058028.1 Olea europaea HOM05D007410 ORTHO05D009500 5.4e-12 77.4 108 40.7
Sopen12g034470 Solanum pennellii HOM05D007410 ORTHO05D009500 7.0e-12 77.0 148 68.9
Nn8g39918 Nelumbo nucifera HOM05D007410 ORTHO05D009500 2.0e-11 75.5 109 42.2
ClCG05G007520 Citrullus lanatus HOM05D007410 ORTHO05D009500 1.3e-10 72.8 132 37.9
Duzib093G0520 Durio zibethinus HOM05D007410 ORTHO05D009500 1.3e-10 72.8 159 66.0
Sc18g0006010 Simmondsia chinensis HOM05D007410 ORTHO05D009500 1.7e-10 72.4 155 67.1
Aa31LG3G15130 Aethionema arabicum HOM05D007410 ORTHO05D009500 2.9e-10 71.6 166 50.6
Oeu023854.1 Olea europaea HOM05D007410 ORTHO05D009500 2.9e-10 71.6 148 36.5
DCAR_020784 Daucus carota HOM05D007410 ORTHO05D009500 5.0e-10 70.9 114 36.0
MELO3C006839.2 Cucumis melo HOM05D007410 ORTHO05D009500 1.1e-09 69.7 117 40.2
Lj9E304T4 Lonicera japonica HOM05D007410 ORTHO05D009500 1.1e-09 69.7 126 35.7
Rhsim03G0082200 Rhododendron simsii HOM05D007410 ORTHO05D009500 2.5e-09 68.6 124 39.5
AT5G12100 Arabidopsis thaliana HOM05D007410 ORTHO05D009500 3.3e-09 68.2 161 27.3
AUR62004183 Chenopodium quinoa HOM05D007410 ORTHO05D009500 3.3e-09 68.2 141 33.3
Sp6g31520 Schrenkiella parvula HOM05D007410 ORTHO05D009500 3.3e-09 68.2 163 54.0
CsaV3_3G016400 Cucumis sativus L. HOM05D007410 ORTHO05D009500 5.6e-09 67.4 134 38.1
Carub.0006s1061 Capsella rubella HOM05D007410 ORTHO05D009500 7.3e-09 67.0 156 55.8
CiPaw.09G007900 Carya illinoinensis HOM05D007410 ORTHO05D009500 7.3e-09 67.0 86 47.7
Atru.chr12.1030 Acer truncatum HOM05D007410 ORTHO05D009500 9.5e-09 66.6 128 39.8
Manes.09G058000 Manihot esculenta HOM05D007410 ORTHO05D009500 9.5e-09 66.6 163 60.7
BolC9t59308H Brassica oleracea HOM05D007410 ORTHO05D009500 1.2e-08 66.2 138 37.7
AUR62013683 Chenopodium quinoa HOM05D007410 ORTHO05D009500 2.1e-08 65.5 159 61.6
Migut.J00989 Erythranthe guttata HOM05D007410 ORTHO05D009500 3.6e-08 64.7 111 36.0
Gohir.A01G210000 Gossypium hirsutum HOM05D007410 ORTHO05D009500 6.2e-08 63.9 157 61.8
Gohir.D01G198900 Gossypium hirsutum HOM05D007410 ORTHO05D009500 6.2e-08 63.9 157 62.4
Gorai.002G243300 Gossypium raimondii HOM05D007410 ORTHO05D009500 6.2e-08 63.9 157 62.4
HanXRQChr17g0534281 Helianthus annuus HOM05D007410 ORTHO05D009500 6.2e-08 63.9 114 34.2
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 8.0e-08 63.5 112 33.0
Cc06_g05130 Coffea canephora HOM05D007410 ORTHO05D009500 1.0e-07 63.2 117 35.0
Ah.05g174660 Amaranthus hybridus HOM05D007410 ORTHO05D009500 4.0e-07 61.2 49 49.0
A10p25700 Brassica napus HOM05D007410 ORTHO05D009500 5.2e-07 60.8 163 54.0
Cpa.g.sc117.70 Carica papaya HOM05D007410 ORTHO05D009500 1.2e-06 59.7 163 63.2
Nitab4.5_0001290g0100 Nicotiana tabacum HOM05D007410 ORTHO05D009500 1.5e-06 59.3 115 35.7
Atru.BG.129.p Acer truncatum HOM05D007410 ORTHO05D009500 5.8e-06 57.4 104 39.4
EL10Ac1g00861 Beta vulgaris HOM05D007410 ORTHO05D009500 7.5e-06 57.0 141 34.0


User provided reference genes

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