Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0016503 Lotus japonicus HOM05D000003 ORTHO05D000126 6.4e-134 480.7 237 100.0
Lj4g0002418 Lotus japonicus HOM05D000003 ORTHO05D000126 4.7e-28 129.0 137 48.9
Lj4g0023781 Lotus japonicus HOM05D000003 ORTHO05D000126 7.8e-23 111.7 157 39.5
LjContig00312_ERROPOS870357g0011324 Lotus japonicus HOM05D000003 ORTHO05D000126 1.8e-19 100.5 212 34.9
Lj6g0022847 Lotus japonicus HOM05D000003 ORTHO05D000126 8.9e-19 98.2 122 40.2
Lj6g0025856 Lotus japonicus HOM05D000003 ORTHO05D000126 2.0e-18 97.1 212 34.4
Lj1g0002872 Lotus japonicus HOM05D000003 ORTHO05D000126 1.1e-16 91.3 144 36.8
Lj4g0024219 Lotus japonicus HOM05D000003 ORTHO05D000126 5.4e-16 89.0 149 38.9
Lj4g0023032 Lotus japonicus HOM05D000003 ORTHO05D000126 1.2e-15 87.8 113 44.2
Lj1g0010193 Lotus japonicus HOM05D000003 ORTHO05D000126 2.5e-13 80.1 125 34.4
Lj3g0024247 Lotus japonicus HOM05D000003 ORTHO05D000126 9.6e-13 78.2 191 30.4
Lj1g0020376 Lotus japonicus HOM05D000003 ORTHO05D000126 2.1e-12 77.0 168 31.5
QL02p097725 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-11 73.9 198 29.3
QL10p058267 Quercus lobata HOM05D000003 ORTHO05D000126 1.8e-11 73.9 117 35.0
QL01p000768 Quercus lobata HOM05D000003 ORTHO05D000126 2.4e-11 73.6 117 35.0
TPR.G16107 Trifolium pratense HOM05D000003 ORTHO05D000126 5.3e-11 72.4 119 33.6
Lj5g0024244 Lotus japonicus HOM05D000003 ORTHO05D000126 1.5e-10 70.9 203 34.0
COL.COLO4_10561 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.6e-10 70.1 126 34.1
Lj5g0023610 Lotus japonicus HOM05D000003 ORTHO05D000126 2.6e-10 70.1 225 25.8
Lj3g0009210 Lotus japonicus HOM05D000003 ORTHO05D000126 3.4e-10 69.7 225 26.2
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 3.4e-10 69.7 120 34.2
TPR.G36487 Trifolium pratense HOM05D000003 ORTHO05D000126 3.4e-10 69.7 118 30.5
AUR62019956 Chenopodium quinoa HOM05D000003 ORTHO05D000126 5.8e-10 68.9 102 32.4
QL03p033500 Quercus lobata HOM05D000003 ORTHO05D000126 5.8e-10 68.9 142 33.8
AUR62022274 Chenopodium quinoa HOM05D000003 ORTHO05D000126 7.6e-10 68.6 145 26.9
Lj2g0021852 Lotus japonicus HOM05D000003 ORTHO05D000126 9.9e-10 68.2 225 25.3
AUR62032744 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.7e-09 67.4 97 37.1
Lj2g0023122 Lotus japonicus HOM05D000003 ORTHO05D000126 3.8e-09 66.2 130 31.5
Lj4g0025238 Lotus japonicus HOM05D000003 ORTHO05D000126 4.9e-09 65.9 193 28.5
Lj5g0003062 Lotus japonicus HOM05D000003 ORTHO05D000004 1.1e-08 64.7 225 26.2
AUR62032102 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.4e-08 64.3 129 27.1
Lj2g0016089 Lotus japonicus HOM05D000003 ORTHO05D000126 2.4e-08 63.5 194 27.8
Manes.03G022751 Manihot esculenta HOM05D000003 ORTHO05D000004 2.4e-08 63.5 123 29.3
QL07p048591 Quercus lobata HOM05D000003 ORTHO05D000126 2.4e-08 63.5 115 33.0
QL08p005297 Quercus lobata HOM05D000003 ORTHO05D000006 3.2e-08 63.2 108 35.2
QL08p034912 Quercus lobata HOM05D000003 ORTHO05D000126 3.2e-08 63.2 117 36.8
QL93p1863_0020 Quercus lobata HOM05D000003 ORTHO05D000126 3.2e-08 63.2 147 32.7
QL05p063585 Quercus lobata HOM05D000003 ORTHO05D000126 4.2e-08 62.8 108 35.2
Dinv15867 Davidia involucrata HOM05D000003 ORTHO05D000126 5.4e-08 62.4 151 29.1
Rhsim09G0068100 Rhododendron simsii HOM05D000003 ORTHO05D000006 5.4e-08 62.4 101 34.7
QL08p015746 Quercus lobata HOM05D000003 ORTHO05D000126 7.1e-08 62.0 152 30.9
TPR.G21894 Trifolium pratense HOM05D000003 ORTHO05D000126 7.1e-08 62.0 103 29.1
AUR62027183 Chenopodium quinoa HOM05D000003 ORTHO05D000126 9.3e-08 61.6 89 34.8
QL02p079362 Quercus lobata HOM05D000003 ORTHO05D000126 9.3e-08 61.6 142 31.0
EL10Ac8g19714 Beta vulgaris HOM05D000003 ORTHO05D000126 1.2e-07 61.2 120 30.8
AUR62014309 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.2e-07 61.2 88 35.2
AUR62024889 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.2e-07 61.2 115 27.8
AUR62022325 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.7e-07 60.1 88 34.1
AUR62026564 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.7e-07 60.1 97 33.0
QL04p002610 Quercus lobata HOM05D000038 ORTHO05D000126 2.7e-07 60.1 115 32.2
Dinv18185 Davidia involucrata HOM05D000003 ORTHO05D000126 3.5e-07 59.7 96 36.5
QL11p054030 Quercus lobata HOM05D000003 ORTHO05D000126 3.5e-07 59.7 140 28.6
Rhsim01G0092500 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.5e-07 59.7 135 32.6
AUR62040080 Chenopodium quinoa HOM05D000003 ORTHO05D000126 4.6e-07 59.3 209 24.9
Lj3g0007232 Lotus japonicus HOM05D000003 ORTHO05D000126 4.6e-07 59.3 62 45.2
RhsimUnG0010100 Rhododendron simsii HOM05D000003 ORTHO05D000126 4.6e-07 59.3 121 28.9
AUR62022378 Chenopodium quinoa HOM05D000003 ORTHO05D000126 6.0e-07 58.9 88 36.4
AUR62032986 Chenopodium quinoa HOM05D000003 ORTHO05D000126 6.0e-07 58.9 88 35.2
AUR62033775 Chenopodium quinoa HOM05D000003 ORTHO05D000126 6.0e-07 58.9 119 32.8
AUR62036218 Chenopodium quinoa HOM05D000003 ORTHO05D000126 6.0e-07 58.9 83 37.3
AUR62044363 Chenopodium quinoa HOM05D000003 ORTHO05D000126 6.0e-07 58.9 83 37.3
QL01p032615 Quercus lobata HOM05D000062 ORTHO05D000043 6.0e-07 58.9 139 30.9
Atru.chr4.686 Acer truncatum HOM05D000003 ORTHO05D000126 7.9e-07 58.5 133 29.3
AUR62030344 Chenopodium quinoa HOM05D000003 ORTHO05D000126 7.9e-07 58.5 87 32.2
QL10p065510 Quercus lobata HOM05D000003 ORTHO05D000126 7.9e-07 58.5 107 33.6
TWI31G0464 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 7.9e-07 58.5 113 33.6
AUR62027518 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.0e-06 58.2 122 31.1
QL02p095319 Quercus lobata HOM05D000003 ORTHO05D000126 1.0e-06 58.2 97 35.1
QL04p005346 Quercus lobata HOM05D000003 ORTHO05D000126 1.0e-06 58.2 115 29.6
QL11p000243 Quercus lobata HOM05D000003 ORTHO05D000126 1.0e-06 58.2 191 27.2
Rhsim02G0134700 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.0e-06 58.2 94 37.2
AUR62006279 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.3e-06 57.8 98 28.6
QL03p062957 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-06 57.8 79 39.2
QL05p075330 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-06 57.8 96 37.5
QL93p0053_0060 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-06 57.8 96 36.5
Dinv32998 Davidia involucrata HOM05D000003 ORTHO05D000126 1.7e-06 57.4 152 30.3
Lj4g0012976 Lotus japonicus HOM05D000003 ORTHO05D000126 1.7e-06 57.4 82 34.1
QL01p029685 Quercus lobata HOM05D000003 ORTHO05D000126 1.7e-06 57.4 118 32.2
QL08p039671 Quercus lobata HOM05D000003 ORTHO05D000126 1.7e-06 57.4 120 30.0
Rhsim08G0119300 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.3e-06 57.0 136 32.4
Rhsim01G0110700 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.0e-06 56.6 140 33.6
Rhsim02G0217100 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.0e-06 56.6 136 30.9
TPR.G23677 Trifolium pratense HOM05D000003 ORTHO05D000126 3.0e-06 56.6 172 25.0
AUR62025036 Chenopodium quinoa HOM05D000003 ORTHO05D000126 3.9e-06 56.2 114 30.7
Dinv06832 Davidia involucrata HOM05D000003 ORTHO05D000126 3.9e-06 56.2 43 55.8
Dinv10706 Davidia involucrata HOM05D000003 ORTHO05D000126 3.9e-06 56.2 152 27.0
QL03p023077 Quercus lobata HOM05D000003 ORTHO05D000126 3.9e-06 56.2 191 28.3
QL03p060940 Quercus lobata HOM05D000005 ORTHO05D000012 3.9e-06 56.2 140 27.1
QL05p026561 Quercus lobata HOM05D000003 ORTHO05D000126 3.9e-06 56.2 134 30.6
QL09p040605 Quercus lobata HOM05D000003 ORTHO05D000126 3.9e-06 56.2 92 33.7
Rhsim01G0112200 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.9e-06 56.2 127 30.7
TWI23G1165 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 5.1e-06 55.8 170 28.8
Atru.chr1.1793 Acer truncatum HOM05D000003 ORTHO05D000126 6.6e-06 55.5 117 27.4
Dinv03310 Davidia involucrata HOM05D000003 ORTHO05D000126 6.6e-06 55.5 203 25.1
QL05p073923 Quercus lobata HOM05D000003 ORTHO05D000006 6.6e-06 55.5 115 27.8
Rhsim02G0038900 Rhododendron simsii HOM05D000003 ORTHO05D000126 6.6e-06 55.5 115 33.0
Rhsim02G0238400 Rhododendron simsii HOM05D000003 ORTHO05D000126 6.6e-06 55.5 111 32.4
Rhsim08G0187900 Rhododendron simsii HOM05D000003 ORTHO05D000006 6.6e-06 55.5 143 32.9
TPR.G40617 Trifolium pratense HOM05D000003 ORTHO05D000126 6.6e-06 55.5 139 29.5
CANSAT54G0252 Cannabis sativa HOM05D000003 ORTHO05D000126 8.7e-06 55.1 118 29.7
COL.COLO4_25190 Corchorus olitorius HOM05D000003 ORTHO05D000126 8.7e-06 55.1 138 29.0
Dinv30133 Davidia involucrata HOM05D000003 ORTHO05D000126 8.7e-06 55.1 102 32.4
Prupe.7G053800 Prunus persica HOM05D000003 ORTHO05D000126 8.7e-06 55.1 117 29.9
QL01p000290 Quercus lobata HOM05D000003 ORTHO05D000126 8.7e-06 55.1 174 27.0
QL01p041898 Quercus lobata HOM05D000003 ORTHO05D000126 8.7e-06 55.1 79 34.2
QL03p041965 Quercus lobata HOM05D000003 ORTHO05D000126 8.7e-06 55.1 74 35.1
QL05p043073 Quercus lobata HOM05D000003 ORTHO05D000126 8.7e-06 55.1 106 29.2
QL11p049571 Quercus lobata HOM05D000003 ORTHO05D000126 8.7e-06 55.1 203 26.1
Rhsim07G0114000 Rhododendron simsii HOM05D000003 ORTHO05D000006 8.7e-06 55.1 140 31.4


User provided reference genes

Program Settings