Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0016201 Lotus japonicus HOM05D012585 ORTHO05D015068 4.8e-85 317.8 157 100.0
VMungo1309G1433 Vigna mungo HOM05D008618 ORTHO05D010393 7.0e-28 127.9 245 39.2
Glyma.06G135900 Glycine max HOM05D012585 ORTHO05D015068 3.7e-21 105.5 85 71.8
Phvul.009G045700 Phaseolus vulgaris HOM05D012585 ORTHO05D015068 3.7e-21 105.5 86 66.3
Glyma.04G228800 Glycine max HOM05D012585 ORTHO05D015068 2.3e-18 96.3 87 66.7
Glyma.06G136100 Glycine max HOM05D008618 ORTHO05D010393 3.8e-18 95.5 69 68.1
Phvul.009G045601 Phaseolus vulgaris HOM05D012585 ORTHO05D015068 1.5e-17 93.6 89 61.8
Glyma.04G228900 Glycine max HOM05D012585 ORTHO05D015068 1.9e-17 93.2 87 63.2
Medtr3g092635 Medicago truncatula HOM05D008618 ORTHO05D010393 3.3e-17 92.4 71 64.8
Glyma.04G228750 Glycine max HOM05D008618 ORTHO05D010393 9.5e-17 90.9 69 63.8
Ca_16775_v3 Cicer arietinum L. HOM05D012585 ORTHO05D015068 4.7e-16 88.6 89 58.4
Lalb_Chr11g0067381 Lupinus albus HOM05D008618 ORTHO05D010393 4.7e-16 88.6 67 62.7
Medtr3g092630 Medicago truncatula HOM05D012585 ORTHO05D015068 4.7e-16 88.6 90 56.7
Psat5g072120 Pisum sativum HOM05D012788 ORTHO05D010393 8.0e-16 87.8 70 61.4
Lalb_Chr08g0239691 Lupinus albus HOM05D012585 ORTHO05D015068 1.8e-15 86.7 89 55.1
Lalb_Chr08g0239681 Lupinus albus HOM05D012585 ORTHO05D015068 6.8e-15 84.7 91 59.3
Phvul.009G045500 Phaseolus vulgaris HOM05D008618 ORTHO05D010393 1.2e-14 84.0 67 62.7
TPR.G33650 Trifolium pratense HOM05D012585 ORTHO05D015068 1.2e-14 84.0 89 55.1
TPR.G33651 Trifolium pratense HOM05D012788 ORTHO05D010393 3.7e-13 79.0 71 56.3
Glyma.06G136000 Glycine max HOM05D012585 ORTHO05D015068 4.5e-11 72.0 87 49.4
Rhsim03G0215000 Rhododendron simsii HOM05D000001 ORTHO05D000003 6.6e-10 68.2 194 30.4
arahy.Tifrunner.gnm1.ann1.XTE2M1 Arachis hypogaea HOM05D012788 ORTHO05D010393 5.6e-09 65.1 69 47.8
Haze_00293 Corylus avellana HOM05D008618 ORTHO05D010393 5.6e-09 65.1 66 47.0
arahy.Tifrunner.gnm1.ann1.4T36ZR Arachis hypogaea HOM05D012788 ORTHO05D010393 1.2e-08 63.9 69 46.4
arahy.Tifrunner.gnm1.ann1.5C4YCE Arachis hypogaea HOM05D012788 ORTHO05D010393 1.2e-08 63.9 69 46.4
arahy.Tifrunner.gnm1.ann1.87KBHK Arachis hypogaea HOM05D012788 ORTHO05D010393 1.2e-08 63.9 69 46.4
arahy.Tifrunner.gnm1.ann1.9LPP9E Arachis hypogaea HOM05D012788 ORTHO05D010393 1.2e-08 63.9 69 46.4
arahy.Tifrunner.gnm1.ann1.B8BFDM Arachis hypogaea HOM05D012788 ORTHO05D010393 1.2e-08 63.9 69 46.4
arahy.Tifrunner.gnm1.ann1.FHB2RT Arachis hypogaea HOM05D012788 ORTHO05D010393 1.2e-08 63.9 69 46.4
arahy.Tifrunner.gnm1.ann1.M7I6G5 Arachis hypogaea HOM05D012788 ORTHO05D010393 1.2e-08 63.9 69 46.4
arahy.Tifrunner.gnm1.ann1.PIR49E Arachis hypogaea HOM05D012788 ORTHO05D010393 1.2e-08 63.9 69 46.4
arahy.Tifrunner.gnm1.ann1.G57NNM Arachis hypogaea HOM05D012788 ORTHO05D010393 3.6e-08 62.4 70 45.7
TAR623G0439 Trochodendron aralioides HOM05D008618 ORTHO05D010393 3.6e-08 62.4 82 43.9
Dinv29214 Davidia involucrata HOM05D008618 ORTHO05D010393 4.7e-08 62.0 70 48.6
TAR629G1218 Trochodendron aralioides HOM05D008618 ORTHO05D010393 4.7e-08 62.0 67 53.7
Cfa016164 Carpinus fangiana HOM05D008618 ORTHO05D010393 8.0e-08 61.2 65 47.7
Rhsim03G0215100 Rhododendron simsii HOM05D008618 ORTHO05D010393 8.0e-08 61.2 65 49.2
TAR623G0113 Trochodendron aralioides HOM05D008618 ORTHO05D010393 8.0e-08 61.2 82 42.7
arahy.Tifrunner.gnm1.ann1.MVIT3T Arachis hypogaea HOM05D012788 ORTHO05D010393 2.3e-07 59.7 70 45.7
Sabra15G0003400 Salix brachista HOM05D008618 ORTHO05D010393 2.3e-07 59.7 69 46.4
Nn3g18880 Nelumbo nucifera HOM05D008618 ORTHO05D010393 3.0e-07 59.3 65 49.2
Potri.012G021500 Populus trichocarpa HOM05D008618 ORTHO05D010393 3.0e-07 59.3 69 44.9
QL09p007223 Quercus lobata HOM05D008618 ORTHO05D010393 4.0e-07 58.9 64 48.4
Hma1.2p1_0094F.1_g047330 Hydrangea macrophylla HOM05D008618 ORTHO05D010393 1.2e-06 57.4 71 47.9
Hma1.2p1_0094F.1_g047336 Hydrangea macrophylla HOM05D008618 ORTHO05D010393 1.2e-06 57.4 71 47.9
CiPaw.02G048200 Carya illinoinensis HOM05D008618 ORTHO05D010393 2.0e-06 56.6 67 46.3
vmacro06440 Vaccinium macrocarpon HOM05D008618 ORTHO05D010393 2.0e-06 56.6 64 48.4
MD07G1298600 Malus domestica HOM05D008618 ORTHO05D010393 3.4e-06 55.8 70 45.7
MBI12_g34833_MAGBIO Magnolia biondii HOM05D008618 ORTHO05D010393 7.5e-06 54.7 72 38.9
Actinidia34266 Actinidia chinensis HOM05D008618 ORTHO05D010393 9.8e-06 54.3 67 41.8


User provided reference genes

Program Settings