Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0016170 Lotus japonicus HOM05D006948 ORTHO05D008703 2.1e-46 188.7 97 100.0
VMungo1383G1377 Vigna mungo HOM05D006948 ORTHO05D008703 1.7e-32 142.5 89 84.3
Ca_27396_v3 Cicer arietinum L. HOM05D006948 ORTHO05D008703 1.6e-27 125.9 86 80.2
Phvul.008G140300 Phaseolus vulgaris HOM05D006948 ORTHO05D008703 1.6e-27 125.9 89 75.3
Medtr7g446140 Medicago truncatula HOM05D006948 ORTHO05D008703 1.4e-26 122.9 87 77.0
Glyma.01G074400 Glycine max HOM05D006948 ORTHO05D008703 3.1e-26 121.7 89 75.3
TPR.G39099 Trifolium pratense HOM05D006948 ORTHO05D008703 3.1e-26 121.7 87 75.9
arahy.Tifrunner.gnm1.ann1.96FU63 Arachis hypogaea HOM05D006948 ORTHO05D008703 1.6e-22 109.4 90 64.4
arahy.Tifrunner.gnm1.ann1.9NP6XU Arachis hypogaea HOM05D006948 ORTHO05D008703 1.6e-22 109.4 90 64.4
Lalb_Chr19g0126621 Lupinus albus HOM05D006948 ORTHO05D008703 4.6e-22 107.8 85 67.1
Ciclev10023020m.g Citrus clementina HOM05D006948 ORTHO05D008703 1.1e-20 103.2 87 60.9
TWI59G0066 Tripterygium wilfordii HOM05D006948 ORTHO05D008703 4.3e-20 101.3 84 63.1
Cpa.g.sc5.223 Carica papaya HOM05D006948 ORTHO05D008703 1.3e-19 99.8 89 57.3
CiPaw.13G028600 Carya illinoinensis HOM05D006948 ORTHO05D008703 2.0e-17 92.4 84 57.1
AUR62023432 Chenopodium quinoa HOM05D006948 ORTHO05D008703 3.4e-17 91.7 88 54.5
Manes.05G052600 Manihot esculenta HOM05D006948 ORTHO05D008703 5.8e-17 90.9 83 59.0
CANSAT21G1424 Cannabis sativa HOM05D006948 ORTHO05D008703 1.3e-16 89.7 87 55.2
Cfa012992 Carpinus fangiana HOM05D006948 ORTHO05D008703 6.5e-16 87.4 81 56.8
EL10Ac1g00789 Beta vulgaris HOM05D006948 ORTHO05D008703 1.4e-15 86.3 86 54.7
Aa31LG10G14620 Aethionema arabicum HOM05D006948 ORTHO05D008703 2.5e-15 85.5 89 52.8
PGR042G1623 Punica granatum HOM05D006948 ORTHO05D008703 2.5e-15 85.5 82 53.7
CsaV3_3G007550 Cucumis sativus L. HOM05D006948 ORTHO05D008703 4.2e-15 84.7 84 51.2
Duzib138G1111 Durio zibethinus HOM05D006948 ORTHO05D008703 7.1e-15 84.0 84 53.6
Gohir.A08G029800 Gossypium hirsutum HOM05D006948 ORTHO05D008703 9.3e-15 83.6 84 52.4
Prupe.2G124300 Prunus persica HOM05D006948 ORTHO05D008703 9.3e-15 83.6 83 55.4
MD00G1058900 Malus domestica HOM05D006948 ORTHO05D008703 1.2e-14 83.2 79 58.2
Gorai.004G039500 Gossypium raimondii HOM05D006948 ORTHO05D008703 2.1e-14 82.4 84 51.2
Actinidia12660 Actinidia chinensis HOM05D006948 ORTHO05D008703 3.5e-14 81.6 80 55.0
PSO732G0264 Papaver somniferum HOM05D006948 ORTHO05D008703 3.5e-14 81.6 89 48.3
Thecc.01G389700 Theobroma cacao HOM05D006948 ORTHO05D008703 4.6e-14 81.3 76 57.9
Potri.014G054300 Populus trichocarpa HOM05D006948 ORTHO05D008703 6.0e-14 80.9 87 55.2
Hund17076 Selenicereus undatus HOM05D006948 ORTHO05D008703 7.9e-14 80.5 83 50.6
Gohir.D08G040600 Gossypium hirsutum HOM05D006948 ORTHO05D008703 1.0e-13 80.1 84 50.0
AUR62018049 Chenopodium quinoa HOM05D006948 ORTHO05D008703 1.3e-13 79.7 76 53.9
Atru.chr4.2323 Acer truncatum HOM05D006948 ORTHO05D008703 1.8e-13 79.3 82 53.7
Psat3g154680 Pisum sativum HOM05D006948 ORTHO05D008703 1.8e-13 79.3 73 64.4
Sabra14G0040200 Salix brachista HOM05D006948 ORTHO05D008703 3.0e-13 78.6 76 57.9
COL.COLO4_12436 Corchorus olitorius HOM05D006948 ORTHO05D008703 3.9e-13 78.2 84 48.8
Nitab4.5_0001818g0020 Nicotiana tabacum HOM05D006948 ORTHO05D008703 3.9e-13 78.2 82 52.4
Thecc.01G390200 Theobroma cacao HOM05D006948 ORTHO05D008703 3.9e-13 78.2 77 54.5
Sp5g02740 Schrenkiella parvula HOM05D006948 ORTHO05D008703 5.1e-13 77.8 89 46.1
CSS0003978 Camellia sinensis var. sinensis HOM05D006948 ORTHO05D008703 6.7e-13 77.4 79 53.2
AT3G60480 Arabidopsis thaliana HOM05D006948 ORTHO05D008703 1.5e-12 76.3 84 48.8
Carub.0005s2721 Capsella rubella HOM05D006948 ORTHO05D008703 1.5e-12 76.3 84 50.0
Eucgr.E01580 Eucalyptus grandis HOM05D006948 ORTHO05D008703 1.5e-12 76.3 78 53.8
THA.LOC104817199 Tarenaya hassleriana HOM05D006948 ORTHO05D008703 1.5e-12 76.3 78 57.7
AL5G42750 Arabidopsis lyrata HOM05D006948 ORTHO05D008703 1.9e-12 75.9 84 48.8
CARHR170860 Cardamine hirsuta HOM05D006948 ORTHO05D008703 1.9e-12 75.9 93 45.2
Cc00_g20460 Coffea canephora HOM05D006948 ORTHO05D008703 1.9e-12 75.9 83 51.8
Rhsim01G0137500 Rhododendron simsii HOM05D006948 ORTHO05D008703 2.5e-12 75.5 78 52.6
C08p35470 Brassica napus HOM05D006948 ORTHO05D008703 5.7e-12 74.3 94 41.5
Peaxi162Scf00392g00125 Petunia axillaris HOM05D006948 ORTHO05D008703 7.4e-12 73.9 82 48.8
RcHm_v2.0_Chr1g0346581 Rosa chinensis HOM05D006948 ORTHO05D008703 7.4e-12 73.9 82 51.2
MSTRG.28159 Avicennia marina HOM05D006948 ORTHO05D008703 1.3e-11 73.2 84 48.8
BcaC07g40567 Brassica carinata HOM05D006948 ORTHO05D008703 1.3e-11 73.2 89 42.7
BcaC07g40569 Brassica carinata HOM05D006948 ORTHO05D008703 2.2e-11 72.4 89 42.7
Dinv43640 Davidia involucrata HOM05D006948 ORTHO05D008703 2.8e-11 72.0 79 46.8
Haze_02785 Corylus avellana HOM05D006948 ORTHO05D008703 1.1e-10 70.1 58 62.1
PSO675G6563 Papaver somniferum HOM05D006948 ORTHO05D008703 1.1e-10 70.1 81 48.1
Solyc01g090500.4 Solanum lycopersicum HOM05D006948 ORTHO05D008703 1.4e-10 69.7 81 46.9
Aqoxy7G00836 Aquilegia oxysepala HOM05D006948 ORTHO05D008703 3.1e-10 68.6 82 46.3
Haze_02790 Corylus avellana HOM05D006948 ORTHO05D008703 3.1e-10 68.6 58 60.3
CDE11G0572 Ceratophyllum demersum HOM05D006948 ORTHO05D008703 4.1e-10 68.2 83 45.8
Sopen01g036290 Solanum pennellii HOM05D006948 ORTHO05D008703 4.1e-10 68.2 81 46.9
ATR0057G003 Amborella trichopoda HOM05D006948 ORTHO05D008703 5.3e-10 67.8 80 45.0
Hma1.2p1_1740F.1_g300040 Hydrangea macrophylla HOM05D006948 ORTHO05D008703 6.9e-10 67.4 77 48.1
FAN10G3172 Fragaria x ananassa HOM05D006948 ORTHO05D008703 9.0e-10 67.0 82 46.3
FAN10G3965 Fragaria x ananassa HOM05D006948 ORTHO05D008703 9.0e-10 67.0 82 46.3
FAN01G0218 Fragaria x ananassa HOM05D006948 ORTHO05D008703 1.2e-09 66.6 82 46.3
FAN03G2439 Fragaria x ananassa HOM05D006948 ORTHO05D008703 1.2e-09 66.6 82 46.3
FvH4_7g09680 Fragaria vesca HOM05D006948 ORTHO05D008703 1.5e-09 66.2 82 46.3
FAN06G1163 Fragaria x ananassa HOM05D006948 ORTHO05D008703 1.5e-09 66.2 82 46.3
FAN06G4415 Fragaria x ananassa HOM05D006948 ORTHO05D008703 1.5e-09 66.2 82 46.3
Lsat_1_v5_gn_7_10441 Lactuca sativa HOM05D006948 ORTHO05D008703 1.5e-09 66.2 75 50.7
CDE02G3860 Ceratophyllum demersum HOM05D006948 ORTHO05D008703 2.0e-09 65.9 82 45.1
Migut.O00539 Erythranthe guttata HOM05D006948 ORTHO05D008703 2.0e-09 65.9 82 51.2
AUR62013722 Chenopodium quinoa HOM05D006948 ORTHO05D008703 3.4e-09 65.1 69 49.3
HanXRQChr06g0168761 Helianthus annuus HOM05D006948 ORTHO05D008703 3.4e-09 65.1 75 50.7
MD07G1101200 Malus domestica HOM05D006948 ORTHO05D008703 3.4e-09 65.1 78 52.6
Haze_24986 Corylus avellana HOM05D006948 ORTHO05D008703 5.9e-09 64.3 58 58.6
ECA236G1236 Erigeron canadensis HOM05D006948 ORTHO05D008703 5.9e-09 64.3 75 48.0
Nn1g00906 Nelumbo nucifera HOM05D006948 ORTHO05D008703 5.9e-09 64.3 76 50.0
Migut.N01755 Erythranthe guttata HOM05D006948 ORTHO05D008703 7.6e-09 63.9 82 50.0
QL04p033368 Quercus lobata HOM05D006948 ORTHO05D008703 1.0e-08 63.5 60 56.7
SGA_v2.0_scaffold43G16525 Striga asiatica HOM05D006948 ORTHO05D008703 1.0e-08 63.5 83 44.6
BolC8t51138H Brassica oleracea HOM05D006948 ORTHO05D008703 1.3e-08 63.2 80 45.0
QL04p032282 Quercus lobata HOM05D006948 ORTHO05D008703 1.3e-08 63.2 60 56.7
Medtr7g446470 Medicago truncatula HOM05D006948 ORTHO05D008703 1.7e-08 62.8 51 68.6
QL04p032169 Quercus lobata HOM05D006948 ORTHO05D008703 1.7e-08 62.8 60 55.0
QL04p033225 Quercus lobata HOM05D006948 ORTHO05D008703 1.7e-08 62.8 60 55.0
ClCG05G000390 Citrullus lanatus HOM05D006948 ORTHO05D008703 2.2e-08 62.4 61 55.7
MELO3C005977.2 Cucumis melo HOM05D006948 ORTHO05D008703 5.0e-08 61.2 61 52.5
Sed0014312 Sechium edule HOM05D006948 ORTHO05D008703 5.0e-08 61.2 100 40.0
BcaC07g42775 Brassica carinata HOM05D006948 ORTHO05D008703 6.5e-08 60.8 80 43.8
Nitab4.5_0002874g0090 Nicotiana tabacum HOM05D006948 ORTHO05D008703 6.5e-08 60.8 66 53.0
QL04p031942 Quercus lobata HOM05D006948 ORTHO05D008703 6.5e-08 60.8 60 53.3
Oeu035671.1 Olea europaea HOM05D006948 ORTHO05D008703 1.1e-07 60.1 66 50.0
A09p52730 Brassica napus HOM05D006948 ORTHO05D008703 1.9e-07 59.3 72 43.1
SEGI_25204 Sequoiadendron giganteum HOM05D006948 ORTHO05D008703 5.5e-07 57.8 74 41.9
SEGI_39218 Sequoiadendron giganteum HOM05D006948 ORTHO05D008703 5.5e-07 57.8 74 41.9
Os04g0549400 Oryza sativa ssp. japonica HOM05D006948 ORTHO05D008703 3.6e-06 55.1 86 39.5
PGSC0003DMG401026039 Solanum tuberosum HOM05D006948 ORTHO05D008703 3.6e-06 55.1 63 46.0
Thecc.01G390600 Theobroma cacao HOM05D006948 ORTHO05D008703 3.6e-06 55.1 48 58.3
unitig_0.g2760 Utricularia gibba HOM05D006948 ORTHO05D008703 4.6e-06 54.7 68 47.1
Zm00001eb429840 Zea mays HOM05D006948 ORTHO05D008703 6.1e-06 54.3 79 40.5
SHI13603 Sapria himalayana HOM05D006948 ORTHO05D008703 7.9e-06 53.9 69 43.5


User provided reference genes

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