Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 0.0e+00 1860.9 991 100.0
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 0.0e+00 1329.3 1004 70.5
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 0.0e+00 1272.7 1004 67.9
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 0.0e+00 1271.9 1006 68.3
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 0.0e+00 1244.6 1052 67.6
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 0.0e+00 1240.3 1001 66.6
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 0.0e+00 1236.9 1030 68.3
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 0.0e+00 1208.0 1037 64.9
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 0.0e+00 1204.5 1032 65.4
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 3.1e-307 1058.5 1140 54.9
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 1.5e-306 1056.2 1136 55.5
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 1.8e-278 963.0 555 84.0
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 1.6e-255 886.7 1110 48.6
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 2.1e-247 859.8 1031 49.5
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 1.4e-246 857.1 1146 46.9
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 1.3e-244 850.5 1150 47.6
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 3.0e-241 839.3 1159 46.2
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.9e-241 839.0 1162 46.8
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.3e-240 835.9 1143 46.5
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 2.8e-239 832.8 1143 46.5
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 3.6e-239 832.4 1047 49.0
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 1.8e-238 830.1 1172 44.8
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 6.8e-238 828.2 1020 50.0
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 5.8e-237 825.1 1147 45.6
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 7.6e-237 824.7 1035 48.9
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 1.3e-236 823.9 1168 45.5
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 2.2e-236 823.2 1036 48.9
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 8.4e-236 821.2 1122 45.9
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 2.7e-234 816.2 1154 47.2
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 5.1e-233 812.0 1203 43.9
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.1e-232 810.8 1208 44.3
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 2.0e-229 800.0 1087 48.3
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 2.6e-229 799.7 1109 46.3
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 4.4e-229 798.9 612 66.0
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 1.1e-227 794.3 1091 46.7
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.2e-227 792.7 1220 43.5
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 1.6e-226 790.4 1046 48.4
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 6.6e-225 785.0 1161 45.8
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 3.3e-224 782.7 1098 46.4
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 7.3e-224 781.6 1153 43.7
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 1.3e-223 780.8 1071 45.8
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 9.9e-221 771.2 1033 47.0
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 1.3e-220 770.8 1034 45.9
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 2.9e-220 769.6 558 67.2
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 7.9e-218 761.5 865 50.4
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 7.9e-218 761.5 866 51.0
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 1.3e-217 760.8 1143 43.7
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 1.3e-215 754.2 1096 44.5
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 2.2e-212 743.4 849 50.2
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 6.4e-212 741.9 1083 45.2
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 1.9e-211 740.3 1082 43.8
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 1.8e-206 723.8 581 63.2
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 1.1e-203 714.5 1140 43.1
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 1.4e-203 714.1 1024 43.6
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 1.8e-201 707.2 1039 43.0
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 3.0e-201 706.4 1032 43.3
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 3.3e-200 703.0 1051 42.2
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 5.7e-200 702.2 1018 43.8
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 8.2e-199 698.4 1032 42.9
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 9.0e-198 694.9 1086 42.3
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 9.0e-198 694.9 1031 43.0
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 2.0e-197 693.7 883 46.5
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 2.6e-197 693.3 877 47.3
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 3.4e-197 693.0 1023 42.9
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 1.3e-196 691.0 1112 42.2
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 2.9e-196 689.9 1057 43.0
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 6.5e-196 688.7 1079 42.3
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 1.1e-195 688.0 1071 41.8
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 3.6e-194 682.9 1122 41.0
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 6.1e-194 682.2 998 43.7
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 7.9e-194 681.8 1005 42.5
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 1.8e-193 680.6 1042 42.5
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 2.3e-193 680.2 1045 42.3
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 3.9e-193 679.5 1026 43.3
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 3.9e-193 679.5 591 58.7
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 1.5e-192 677.6 1006 42.3
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 9.7e-192 674.9 986 43.9
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 9.7e-192 674.9 1028 42.0
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 1.7e-191 674.1 676 54.3
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 1.1e-190 671.4 689 53.3
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 2.0e-189 667.2 1128 42.1
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 4.5e-189 666.0 836 47.8
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 1.3e-188 664.5 1037 42.5
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 1.1e-187 661.4 1152 41.0
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 1.9e-187 660.6 1089 41.0
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 3.9e-185 652.9 966 44.1
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 1.7e-183 647.5 1068 40.6
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 3.7e-183 646.4 572 58.9
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 1.5e-181 641.0 956 42.6
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.0e-181 640.6 969 43.3
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 7.7e-181 638.6 893 43.4
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 2.3e-177 627.1 873 45.9
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 2.8e-175 620.2 961 43.2
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 9.1e-174 615.1 1061 39.3
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 1.5e-168 597.8 675 50.8
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 1.1e-166 591.7 569 52.7
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 1.8e-158 564.3 681 48.6
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 4.5e-157 559.7 483 58.0
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 3.8e-156 556.6 512 56.1
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.3e-143 515.0 891 40.0
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.6e-136 490.7 506 54.0
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 1.3e-127 461.8 454 53.3
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 8.3e-127 459.1 315 68.9
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 2.1e-122 444.5 755 37.2
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 8.4e-119 432.6 1117 32.5
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 3.2e-118 430.6 906 36.6
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 1.3e-116 425.2 566 43.3
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 2.6e-112 411.0 505 42.4
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 2.6e-112 411.0 544 41.7
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.2e-109 402.1 459 48.1
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 2.3e-108 397.9 804 37.8
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 2.3e-108 397.9 642 39.4
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 7.1e-94 349.7 872 34.9
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 1.0e-76 292.7 228 66.7
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 1.4e-70 272.3 747 33.9
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 4.7e-69 267.3 226 60.2
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 1.5e-59 235.7 640 31.9
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 8.0e-53 213.4 633 31.9
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 4.0e-36 157.9 578 31.1
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 7.3e-30 137.1 274 33.2
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 8.6e-23 113.6 80 72.5
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 2.2e-18 99.0 230 31.3
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 3.0e-15 88.6 69 62.3
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 8.6e-15 87.0 81 54.3
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 8.6e-15 87.0 101 46.5
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 1.9e-14 85.9 57 66.7
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 2.5e-14 85.5 49 77.6
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 2.1e-13 82.4 153 39.9
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.8e-13 82.0 173 35.8
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 1.1e-12 80.1 53 66.0
FAN04G1664 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.0e-07 62.0 131 37.4


User provided reference genes

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