Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0015510 Lotus japonicus HOM05D004081 ORTHO05D004935 8.3e-263 909.8 463 100.0
Ca_15610_v3 Cicer arietinum L. HOM05D004081 ORTHO05D004935 2.2e-178 629.4 440 75.5
Glyma.06G083100 Glycine max HOM05D004081 ORTHO05D004935 3.1e-177 625.5 431 74.0
TPR.G1357 Trifolium pratense HOM05D004081 ORTHO05D004935 7.7e-176 620.9 439 73.3
Glyma.04G081400 Glycine max HOM05D004081 ORTHO05D004935 5.2e-172 608.2 363 82.4
Phvul.009G106100 Phaseolus vulgaris HOM05D004081 ORTHO05D004935 1.2e-168 597.0 435 70.1
arahy.Tifrunner.gnm1.ann1.QHLN3W Arachis hypogaea HOM05D004081 ORTHO05D004935 1.0e-167 594.0 453 69.1
arahy.Tifrunner.gnm1.ann1.Y1FCW9 Arachis hypogaea HOM05D004081 ORTHO05D004935 5.2e-164 581.6 384 76.0
Psat5g023440 Pisum sativum HOM05D004081 ORTHO05D004935 1.1e-161 573.9 440 68.9
VMungo1309G1316 Vigna mungo HOM05D004081 ORTHO05D004935 3.2e-161 572.4 428 69.9
Glyma.06G083200 Glycine max HOM05D004081 ORTHO05D004935 2.3e-159 566.2 370 75.9
Lalb_Chr08g0243191 Lupinus albus HOM05D004081 ORTHO05D004935 1.3e-154 550.4 431 66.8
Glyma.06G083000 Glycine max HOM05D004081 ORTHO05D004935 4.0e-148 528.9 334 79.0
Nn3g18089 Nelumbo nucifera HOM05D004081 ORTHO05D004935 5.8e-147 525.0 357 72.3
MD08G1116700 Malus domestica HOM05D004081 ORTHO05D004935 8.4e-146 521.2 375 70.4
Thecc.09G041800 Theobroma cacao HOM05D004081 ORTHO05D004935 1.6e-144 516.9 348 73.6
QL12p029513 Quercus lobata HOM05D004081 ORTHO05D004935 4.6e-144 515.4 360 70.8
Actinidia31231 Actinidia chinensis HOM05D004081 ORTHO05D004935 1.3e-143 513.8 398 65.8
Sc23g0006000 Simmondsia chinensis HOM05D004081 ORTHO05D004935 1.3e-143 513.8 358 70.9
TWI34G1344 Tripterygium wilfordii HOM05D004081 ORTHO05D004935 1.7e-143 513.5 364 70.6
Gohir.D06G093900 Gossypium hirsutum HOM05D004081 ORTHO05D004935 3.0e-143 512.7 369 70.7
Gorai.010G108400 Gossypium raimondii HOM05D004081 ORTHO05D004935 3.0e-143 512.7 369 70.7
Potri.006G240600 Populus trichocarpa HOM05D004081 ORTHO05D004935 5.1e-143 511.9 424 62.3
Prupe.1G451100 Prunus persica HOM05D004081 ORTHO05D004935 5.1e-143 511.9 360 71.1
BcaB07g29982 Brassica carinata HOM05D004081 ORTHO05D004935 8.6e-143 511.1 365 70.4
RcHm_v2.0_Chr6g0305921 Rosa chinensis HOM05D004081 ORTHO05D004935 1.5e-142 510.4 382 68.3
Duzib168G0078 Durio zibethinus HOM05D004081 ORTHO05D004935 5.6e-142 508.4 360 70.3
vmacro11071 Vaccinium macrocarpon HOM05D004081 ORTHO05D004935 5.6e-142 508.4 363 71.6
FvH4_2g35900 Fragaria vesca HOM05D004081 ORTHO05D004935 7.3e-142 508.1 424 63.0
Psat5g023320 Pisum sativum HOM05D004081 ORTHO05D004935 9.6e-142 507.7 309 79.3
CSS0039336 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 1.2e-141 507.3 349 72.5
FAN20G0986 Fragaria x ananassa HOM05D004081 ORTHO05D004935 1.6e-141 506.9 414 63.8
FAN27G0952 Fragaria x ananassa HOM05D004081 ORTHO05D004935 1.6e-141 506.9 380 67.6
Manes.03G062100 Manihot esculenta HOM05D004081 ORTHO05D004935 2.8e-141 506.1 380 66.1
BcaC04g23588 Brassica carinata HOM05D004081 ORTHO05D004935 3.6e-141 505.8 353 69.4
BolC9t53593H Brassica oleracea HOM05D004081 ORTHO05D004935 1.8e-140 503.4 354 69.5
Manes.16G071800 Manihot esculenta HOM05D004081 ORTHO05D004935 2.4e-140 503.1 415 62.2
BolC2t11999H Brassica oleracea HOM05D004081 ORTHO05D004935 3.1e-140 502.7 349 70.2
PGSC0003DMG400005495 Solanum tuberosum HOM05D004081 ORTHO05D004935 3.1e-140 502.7 354 69.5
Thhalv10004493m.g Eutrema salsugineum HOM05D004081 ORTHO05D004935 5.2e-140 501.9 348 70.4
Sopen08g022280 Solanum pennellii HOM05D004081 ORTHO05D004935 1.2e-139 500.7 354 69.2
BcaC03g17893 Brassica carinata HOM05D004081 ORTHO05D004935 2.0e-139 500.0 353 69.1
Gohir.D06G094000 Gossypium hirsutum HOM05D004081 ORTHO05D004935 2.0e-139 500.0 357 68.6
Solyc08g068400.4 Solanum lycopersicum HOM05D004081 ORTHO05D004935 2.0e-139 500.0 354 68.9
AL6G37640 Arabidopsis lyrata HOM05D002708 ORTHO05D003516 2.6e-139 499.6 363 67.8
PGR004G0014 Punica granatum HOM05D004081 ORTHO05D004935 2.6e-139 499.6 362 69.3
EL10Ac2g04053 Beta vulgaris HOM05D004081 ORTHO05D004935 4.4e-139 498.8 423 62.9
Eucgr.E03517 Eucalyptus grandis HOM05D004081 ORTHO05D004935 4.4e-139 498.8 350 71.1
Gorai.010G108500 Gossypium raimondii HOM05D004081 ORTHO05D004935 4.4e-139 498.8 357 68.6
Migut.A00225 Erythranthe guttata HOM05D004081 ORTHO05D004935 5.8e-139 498.4 394 62.7
Sabra06G0188200 Salix brachista HOM05D004081 ORTHO05D004935 5.8e-139 498.4 368 66.8
GSVIVG01035653001 Vitis vinifera HOM05D004081 ORTHO05D004935 5.8e-139 498.4 349 72.2
Duzib150G1044 Durio zibethinus HOM05D004081 ORTHO05D004935 7.6e-139 498.0 413 63.7
Cfa013350 Carpinus fangiana HOM05D004081 ORTHO05D004935 9.9e-139 497.7 415 63.6
TAR383G0460 Trochodendron aralioides HOM05D004081 ORTHO05D004935 9.9e-139 497.7 358 69.8
BcaB04g19768 Brassica carinata HOM05D004081 ORTHO05D004935 2.2e-138 496.5 353 67.7
Aa31LG11G4780 Aethionema arabicum HOM05D004081 ORTHO05D004935 2.9e-138 496.1 363 68.6
Nitab4.5_0002411g0020 Nicotiana tabacum HOM05D004081 ORTHO05D004935 4.9e-138 495.4 362 69.1
Nitab4.5_0001499g0090 Nicotiana tabacum HOM05D004081 ORTHO05D004935 8.4e-138 494.6 354 69.5
Ah.10g035110 Amaranthus hybridus HOM05D004081 ORTHO05D004935 1.4e-137 493.8 349 70.8
CARHR187640 Cardamine hirsuta HOM05D004081 ORTHO05D004935 1.4e-137 493.8 348 68.7
Peaxi162Scf00090g00194 Petunia axillaris HOM05D004081 ORTHO05D004935 1.9e-137 493.4 358 67.0
Haze_21871 Corylus avellana HOM05D004081 ORTHO05D004935 2.4e-137 493.0 358 69.0
Carub.0006s2355 Capsella rubella HOM05D004081 ORTHO05D004935 4.2e-137 492.3 350 68.3
Sp2g21850 Schrenkiella parvula HOM05D004081 ORTHO05D004935 4.2e-137 492.3 349 68.8
Sc06g0000750 Simmondsia chinensis HOM05D004081 ORTHO05D004935 1.2e-136 490.7 420 61.0
Cc08_g09170 Coffea canephora HOM05D004081 ORTHO05D004935 2.7e-136 489.6 346 70.5
COL.COLO4_18679 Corchorus olitorius HOM05D004081 ORTHO05D004935 2.7e-136 489.6 345 70.4
Duzib168G2093 Durio zibethinus HOM05D004081 ORTHO05D004935 7.8e-136 488.0 350 69.4
ECA236G4667 Erigeron canadensis HOM05D004081 ORTHO05D004935 7.8e-136 488.0 355 67.9
AT5G25770 Arabidopsis thaliana HOM05D004081 ORTHO05D004935 1.3e-135 487.3 358 66.5
Aqoxy7G01585 Aquilegia oxysepala HOM05D004081 ORTHO05D004935 1.7e-135 486.9 374 66.0
Sed0008402 Sechium edule HOM05D004081 ORTHO05D004935 2.3e-135 486.5 357 66.9
CSS0025305 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 5.1e-135 485.3 368 68.2
AUR62009311 Chenopodium quinoa HOM05D004081 ORTHO05D004935 6.6e-135 485.0 360 68.6
HanXRQChr16g0510231 Helianthus annuus HOM05D004081 ORTHO05D004935 6.6e-135 485.0 363 66.1
MELO3C003456.2 Cucumis melo HOM05D004081 ORTHO05D004935 1.5e-134 483.8 417 62.4
PSO566G0156 Papaver somniferum HOM05D004081 ORTHO05D004935 1.5e-134 483.8 352 69.9
AUR62029665 Chenopodium quinoa HOM05D004081 ORTHO05D004935 2.5e-134 483.0 353 69.1
CsaV3_3G048650 Cucumis sativus L. HOM05D004081 ORTHO05D004935 3.3e-134 482.6 374 65.2
Thecc.09G041700 Theobroma cacao HOM05D004081 ORTHO05D004935 7.3e-134 481.5 356 67.1
Oeu011271.1 Olea europaea HOM05D004081 ORTHO05D004935 1.3e-133 480.7 377 64.7
Hund03409 Selenicereus undatus HOM05D004081 ORTHO05D004935 1.6e-133 480.3 412 61.7
PSO782G5115 Papaver somniferum HOM05D004081 ORTHO05D004935 2.4e-132 476.5 352 68.8
MSTRG.11708 Avicennia marina HOM05D004081 ORTHO05D004935 4.0e-132 475.7 390 62.1
Solyc05g041530.3 Solanum lycopersicum HOM05D004081 ORTHO05D004935 4.0e-132 475.7 348 66.4
Sopen05g025590 Solanum pennellii HOM05D004081 ORTHO05D004935 2.0e-131 473.4 372 64.2
unitig_748.g7994 Utricularia gibba HOM05D004081 ORTHO05D004935 2.0e-131 473.4 349 65.6
Aa31LG11G4770 Aethionema arabicum HOM05D004081 ORTHO05D004935 3.4e-131 472.6 363 66.1
Gohir.A06G094300 Gossypium hirsutum HOM05D004081 ORTHO05D004935 1.3e-130 470.7 369 66.4
SGA_v2.0_scaffold243G44290 Striga asiatica HOM05D004081 ORTHO05D004935 1.3e-130 470.7 340 65.9
AUR62041725 Chenopodium quinoa HOM05D004081 ORTHO05D004935 2.2e-130 469.9 335 70.1
BolC2t12002H Brassica oleracea HOM05D004081 ORTHO05D004935 2.9e-130 469.5 333 68.8
CSS0003690 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 2.4e-129 466.5 305 73.8
Os06g0163200 Oryza sativa ssp. japonica HOM05D004081 ORTHO05D004935 7.1e-129 464.9 353 65.4
PGSC0003DMG400020762 Solanum tuberosum HOM05D004081 ORTHO05D004935 7.1e-129 464.9 409 59.9
ClCG11G015230 Citrullus lanatus HOM05D004081 ORTHO05D004935 2.1e-128 463.4 383 62.1
CiPaw.07G206000 Carya illinoinensis HOM05D004081 ORTHO05D004935 3.5e-128 462.6 312 71.8
THA.LOC104815055 Tarenaya hassleriana HOM05D004081 ORTHO05D004935 7.9e-128 461.5 347 65.4
CAN.G21.43 Capsicum annuum HOM05D004081 ORTHO05D004935 1.3e-127 460.7 305 71.1
Lsat_1_v5_gn_8_105500 Lactuca sativa HOM05D004081 ORTHO05D004935 1.1e-126 457.6 352 65.3
SalBow4G2011 Salvia bowleyana HOM05D004081 ORTHO05D004935 9.6e-126 454.5 364 61.5
Hma1.2p1_2102F.1_g314030 Hydrangea macrophylla HOM05D004081 ORTHO05D004935 8.1e-125 451.4 278 77.7
Rhsim02G0180500 Rhododendron simsii HOM05D004081 ORTHO05D004935 1.1e-124 451.1 336 68.8
THA.LOC104799704 Tarenaya hassleriana HOM05D004081 ORTHO05D004935 7.1e-121 438.3 347 64.0
CSS0038651 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 9.3e-121 438.0 305 69.8
MBI01_g30745_MAGBIO Magnolia biondii HOM05D004081 ORTHO05D004935 9.3e-121 438.0 315 68.6
Ciclev10009208m.g Citrus clementina HOM05D004081 ORTHO05D004935 4.3e-118 429.1 262 76.7
Phvul.009G105800 Phaseolus vulgaris HOM05D004081 ORTHO05D004935 7.4e-118 428.3 394 56.9
BcaC04g23590 Brassica carinata HOM05D004081 ORTHO05D004935 2.8e-117 426.4 354 62.1
Lsat_1_v5_gn_8_134220 Lactuca sativa HOM05D004081 ORTHO05D004935 2.4e-116 423.3 326 63.8
Lsat_1_v5_gn_8_104541 Lactuca sativa HOM05D004081 ORTHO05D004935 2.6e-115 419.9 326 63.8
Lj7A705T29 Lonicera japonica HOM05D004081 ORTHO05D004935 7.1e-113 411.8 307 67.4
VMungo0768G0001 Vigna mungo HOM05D004081 ORTHO05D004935 1.6e-112 410.6 389 55.3
BcaC03g17895 Brassica carinata HOM05D004081 ORTHO05D004935 1.0e-111 407.9 480 47.5
CSS0042840 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 3.9e-111 406.0 339 63.7
A09p06100 Brassica napus HOM05D004081 ORTHO05D004935 6.7e-111 405.2 250 74.4
Rhsim02G0180200 Rhododendron simsii HOM05D001113 ORTHO05D000968 6.7e-111 405.2 354 59.9
Phvul.009G107301 Phaseolus vulgaris HOM05D004081 ORTHO05D004935 1.5e-107 394.0 417 50.8
Lsat_1_v5_gn_8_104800 Lactuca sativa HOM05D004081 ORTHO05D004935 9.3e-105 384.8 326 59.8
CAN.G21.42 Capsicum annuum HOM05D004081 ORTHO05D004935 3.6e-104 382.9 249 72.3
BolC2t12001H Brassica oleracea HOM05D004081 ORTHO05D004935 1.8e-95 354.0 301 61.5
Actinidia13318 Actinidia chinensis HOM05D004081 ORTHO05D004935 1.5e-94 350.9 223 76.7
Gohir.A06G094400 Gossypium hirsutum HOM05D004081 ORTHO05D004935 4.4e-94 349.4 384 50.0
CANSAT25G3157 Cannabis sativa HOM05D004081 ORTHO05D004935 9.7e-94 348.2 256 68.4
FAN15G1869 Fragaria x ananassa HOM05D004081 ORTHO05D004935 1.8e-92 344.0 259 68.3
DCAR_004492 Daucus carota HOM05D004081 ORTHO05D004935 1.5e-91 340.9 272 66.5
AagrBONN_evm.TU.Sc2ySwM_228.1948 Anthoceros agrestis HOM05D004081 ORTHO05D004935 1.0e-90 338.2 356 50.0
Glyma.04G081600 Glycine max HOM05D004081 ORTHO05D004935 1.7e-90 337.4 195 79.5
Cpa.g.sc7.252 Carica papaya HOM05D004081 ORTHO05D004935 2.2e-90 337.0 257 67.3
Mapoly0161s0002 Marchantia polymorpha HOM05D004081 ORTHO05D004935 2.5e-89 333.6 299 54.2
Duzib168G0602 Durio zibethinus HOM05D004081 ORTHO05D004935 9.4e-89 331.6 321 55.5
HPP92_021511 Vanilla planifolia HOM05D004081 ORTHO05D004935 2.7e-88 330.1 318 56.9
CAN.G21.41 Capsicum annuum HOM05D004081 ORTHO05D004935 8.8e-87 325.1 210 71.9
SHI18658 Sapria himalayana HOM05D004081 ORTHO05D004935 7.4e-86 322.0 359 49.9
Lsat_1_v5_gn_8_104461 Lactuca sativa HOM05D004081 ORTHO05D004935 4.5e-83 312.8 385 47.5
Zm00001eb271420 Zea mays HOM05D004081 ORTHO05D004935 6.5e-82 308.9 273 59.7
Dinv30265 Davidia involucrata HOM05D004081 ORTHO05D004935 3.6e-80 303.1 284 60.2
SMO089G0019 Selaginella moellendorffii HOM05D004081 ORTHO05D004935 1.4e-76 291.2 280 51.1
CAN.G21.44 Capsicum annuum HOM05D004081 ORTHO05D004935 7.0e-76 288.9 280 55.7
ATR0121G001 Amborella trichopoda HOM05D004081 ORTHO05D004935 3.5e-75 286.6 304 53.9
ATR0315G111 Amborella trichopoda HOM05D004081 ORTHO05D004935 5.5e-73 279.3 225 67.1
CSS0013583 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 1.3e-69 268.1 195 69.7
Eucgr.L00922 Eucalyptus grandis HOM05D004081 ORTHO05D004935 1.6e-64 251.1 193 68.9
CSS0028651 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 2.3e-63 247.3 195 66.2
THA.LOC104809696 Tarenaya hassleriana HOM05D004081 ORTHO05D004935 2.4e-60 237.3 192 66.1
Atru.chr7.2143 Acer truncatum HOM05D004081 ORTHO05D004935 4.1e-60 236.5 134 82.8
Lsat_1_v5_gn_8_104201 Lactuca sativa HOM05D004081 ORTHO05D004935 4.1e-60 236.5 341 44.3
Medtr3g110115 Medicago truncatula HOM05D004081 ORTHO05D004935 1.5e-54 218.0 339 44.2
Hund03408 Selenicereus undatus HOM05D004081 ORTHO05D004935 2.8e-48 197.2 126 73.0
MCO09G062 Micromonas commoda HOM05D004081 ORTHO05D004935 4.6e-43 179.9 327 34.3
Cre16.g676500 Chlamydomonas reinhardtii HOM05D004081 ORTHO05D004935 1.5e-41 174.9 222 41.9
SEGI_32132 Sequoiadendron giganteum HOM05D004081 ORTHO05D004935 1.5e-41 174.9 163 59.5
Lsat_1_v5_gn_0_34401 Lactuca sativa HOM05D004081 ORTHO05D004935 8.1e-40 169.1 206 48.5
AL6G37600 Arabidopsis lyrata HOM05D004081 ORTHO05D004935 1.2e-38 165.2 156 52.6
PRCOL_00003400 Prasinoderma coloniale HOM05D004081 ORTHO05D004935 3.2e-36 157.1 314 29.3
Nitab4.5_0000513g0070 Nicotiana tabacum HOM05D004081 ORTHO05D004935 4.6e-35 153.3 338 34.9
BcaB05g25303 Brassica carinata HOM05D004081 ORTHO05D004935 1.3e-34 151.8 89 77.5
Atru.chr7.2142 Acer truncatum HOM05D004081 ORTHO05D004935 2.6e-30 137.5 119 62.2
PRCOL_00002146 Prasinoderma coloniale HOM05D004081 ORTHO05D004935 9.6e-25 119.0 205 33.7
HPP92_021483 Vanilla planifolia HOM05D004081 ORTHO05D004935 1.2e-14 85.5 69 56.5
ATR0241G001 Amborella trichopoda HOM05D004081 ORTHO05D004935 1.3e-13 82.0 77 53.2
Cpa.g.sc7.250 Carica papaya HOM05D002779 ORTHO05D003074 4.2e-12 77.0 49 69.4
Zm00001eb357480 Zea mays HOM05D002669 ORTHO05D004935 6.7e-10 69.7 75 49.3
Zm00001eb288810 Zea mays HOM05D002669 ORTHO05D004935 1.5e-09 68.6 75 49.3
Glyma.04G081300 Glycine max HOM05D004081 ORTHO05D025646 2.5e-09 67.8 54 66.7
Ciclev10010051m.g Citrus clementina HOM05D004081 ORTHO05D004935 9.6e-09 65.9 83 47.0
Oeu014640.1 Olea europaea HOM05D004081 ORTHO05D025646 2.4e-07 61.2 71 53.5
ATR0121G013 Amborella trichopoda HOM05D004081 ORTHO05D004935 2.6e-06 57.8 75 49.3
Glyma.04G081501 Glycine max HOM05D004081 ORTHO05D025646 2.6e-06 57.8 66 50.0


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