Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 1.1e-153 546.6 274 100.0
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 7.9e-128 460.7 276 86.6
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 1.5e-126 456.4 275 84.0
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 4.8e-125 451.4 277 85.2
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 5.7e-118 427.9 280 79.3
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 2.2e-117 426.0 278 81.7
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 3.1e-116 422.2 278 77.0
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 4.1e-116 421.8 281 79.7
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 8.5e-114 414.1 278 75.2
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 1.9e-113 412.9 275 76.7
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 2.5e-113 412.5 280 76.4
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 2.1e-112 409.5 277 74.7
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 4.7e-112 408.3 282 74.8
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 4.0e-111 405.2 275 76.0
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 4.0e-111 405.2 274 75.2
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 6.7e-111 404.4 277 74.7
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 6.7e-111 404.4 274 74.1
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 6.7e-111 404.4 274 74.5
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 1.2e-110 403.7 274 75.5
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 2.6e-110 402.5 274 73.7
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 2.6e-110 402.5 274 75.9
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 1.3e-109 400.2 274 73.4
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 1.7e-109 399.8 274 75.9
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.2e-109 399.4 279 74.2
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.8e-109 399.1 279 73.8
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 3.7e-109 398.7 275 72.7
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 3.7e-109 398.7 277 74.4
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 4.8e-109 398.3 276 73.6
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 1.8e-108 396.4 279 73.1
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 4.1e-108 395.2 275 74.2
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 4.1e-108 395.2 276 74.6
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 7.0e-108 394.4 281 71.9
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 1.6e-107 393.3 274 73.4
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 3.5e-107 392.1 279 72.4
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 3.5e-107 392.1 275 72.4
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 1.7e-106 389.8 259 77.2
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 2.9e-106 389.0 279 71.7
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 3.8e-106 388.7 274 72.6
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 5.0e-106 388.3 276 72.5
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 8.5e-106 387.5 274 73.0
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 8.5e-106 387.5 283 71.4
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 5.5e-105 384.8 274 71.2
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 6.1e-104 381.3 277 70.4
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 8.0e-104 380.9 276 72.5
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 1.0e-103 380.6 275 72.7
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 1.4e-103 380.2 303 67.7
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 1.8e-103 379.8 275 72.4
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 1.8e-103 379.8 281 69.0
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 2.3e-103 379.4 286 68.5
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 4.0e-103 378.6 280 71.8
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 5.2e-103 378.3 279 71.0
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 3.4e-102 375.6 276 71.0
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 5.7e-102 374.8 275 71.3
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 1.3e-101 373.6 282 69.9
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 1.3e-101 373.6 279 72.0
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 2.8e-101 372.5 275 69.5
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 3.7e-101 372.1 304 67.4
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 1.4e-100 370.2 223 80.3
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 2.4e-100 369.4 275 68.7
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 4.1e-100 368.6 281 69.8
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 7.0e-100 367.9 238 76.9
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 7.0e-100 367.9 271 71.6
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 2.0e-99 366.3 201 86.6
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 3.5e-99 365.5 284 67.6
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 8.6e-98 360.9 284 68.0
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 1.5e-97 360.1 277 68.2
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 2.5e-97 359.4 228 77.2
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 2.5e-97 359.4 228 77.2
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 4.2e-97 358.6 278 68.0
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 4.2e-97 358.6 278 68.0
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 7.2e-97 357.8 264 69.7
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 7.2e-97 357.8 275 67.3
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 9.5e-97 357.5 275 67.3
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.2e-96 357.1 221 78.3
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 2.1e-96 356.3 275 68.4
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 3.6e-96 355.5 292 64.4
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 4.7e-96 355.1 279 68.8
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 1.0e-95 354.0 276 68.8
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 1.0e-95 354.0 290 64.1
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 2.3e-95 352.8 279 67.0
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 3.0e-95 352.4 305 63.9
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 3.0e-95 352.4 202 83.7
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 4.0e-95 352.1 264 68.9
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 6.8e-95 351.3 202 83.7
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 3.4e-94 349.0 265 68.7
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 4.4e-94 348.6 280 66.1
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 2.2e-93 346.3 279 66.7
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 9.2e-92 340.9 204 79.9
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 1.2e-91 340.5 280 63.9
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 3.5e-91 339.0 213 78.9
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 1.7e-90 336.7 267 67.0
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 7.3e-89 331.3 217 74.7
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 2.8e-88 329.3 232 72.0
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 4.7e-88 328.6 202 77.7
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 2.6e-86 322.8 199 77.9
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 3.7e-85 318.9 293 58.4
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 2.7e-83 312.8 218 72.9
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.7e-82 310.1 281 62.6
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 4.3e-81 305.4 232 66.8
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 2.1e-80 303.1 178 83.1
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 3.6e-80 302.4 241 66.0
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 1.4e-79 300.4 275 59.6
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 5.2e-79 298.5 277 62.1
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 2.6e-78 296.2 199 72.4
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.1e-76 290.8 240 66.2
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 1.7e-69 266.9 288 53.8
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 3.7e-69 265.8 161 80.1
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 1.4e-68 263.8 155 81.9
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 4.1e-68 262.3 198 65.2
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 7.1e-68 261.5 217 64.1
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 3.9e-66 255.8 157 79.6
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 1.3e-61 240.7 226 57.1
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 2.2e-61 240.0 202 60.4
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 2.1e-56 223.4 248 47.2
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 1.4e-52 210.7 228 47.8
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 5.4e-52 208.8 116 85.3
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 3.9e-50 202.6 174 66.1
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 1.2e-46 191.0 114 81.6
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 4.6e-43 179.1 185 54.1
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 5.5e-28 129.0 74 78.4
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 2.8e-24 116.7 116 53.4
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 5.1e-10 69.3 63 57.1
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 6.3e-08 62.4 34 82.4


User provided reference genes

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