Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0013414 Lotus japonicus HOM05D004283 ORTHO05D002183 7.8e-178 627.1 333 100.0
TPR.G8598 Trifolium pratense HOM05D005718 ORTHO05D004853 2.3e-28 130.6 224 34.4
VMungo1309G0077 Vigna mungo HOM05D000176 ORTHO05D000106 2.4e-22 110.5 156 36.5
VMungo0647G2344 Vigna mungo HOM05D000176 ORTHO05D000106 2.3e-20 104.0 209 29.2
Ca_04586_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.3e-19 99.8 164 31.7
Ca_07671_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.3e-18 98.2 184 31.0
Ca_13087_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.1e-17 93.6 158 31.6
Ca_02615_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.5e-16 91.3 162 33.3
Ca_12206_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.5e-16 91.3 215 29.8
Ca_20151_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.5e-16 91.3 145 32.4
Ca_14105_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.6e-16 89.0 146 31.5
Ca_24031_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 2.2e-15 87.4 146 30.8
Ca_16741_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.9e-15 87.0 137 32.1
Ca_13678_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.8e-15 86.7 143 35.0
Ca_05966_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.5e-15 85.9 192 28.1
Ca_06513_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.5e-15 85.9 143 34.3
Ca_22851_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.5e-15 85.9 161 29.8
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 1.9e-14 84.3 310 22.3
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 3.2e-14 83.6 160 30.0
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 5.5e-14 82.8 183 26.8
Ca_25322_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.1e-14 82.4 135 31.1
Ca_05491_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.3e-14 82.0 143 33.6
Ca_25328_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.3e-14 82.0 182 28.0
Ca_11967_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.2e-13 81.6 176 29.5
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 1.6e-13 81.3 191 28.3
Ca_02277_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.1e-13 80.9 222 28.8
Ca_12157_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.5e-13 80.1 236 26.3
Ca_00650_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.6e-13 79.7 168 31.5
Ca_02311_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 4.6e-13 79.7 149 30.2
Ca_04043_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.9e-13 79.0 209 24.4
Ca_22794_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.8e-12 77.8 129 30.2
Ca_02570_v3 Cicer arietinum L. HOM05D001569 ORTHO05D002183 2.3e-12 77.4 170 29.4
Ca_08449_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.0e-12 77.0 172 28.5
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 5.1e-12 76.3 191 27.2
Ca_19385_v3 Cicer arietinum L. HOM05D000835 ORTHO05D002122 6.7e-12 75.9 120 36.7
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 8.7e-12 75.5 185 30.3
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 8.7e-12 75.5 185 30.3
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 8.7e-12 75.5 163 30.7
Ca_09999_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.1e-11 75.1 118 35.6
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-11 75.1 163 30.7
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-11 75.1 181 29.3
Ca_13581_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.5e-11 74.7 110 33.6
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-11 74.3 205 28.8
Ca_23731_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.3e-11 73.6 131 29.8
Ca_02100_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.3e-11 73.2 231 26.4
Ca_11909_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.3e-11 73.2 170 28.2
Ca_02224_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.7e-11 72.8 196 25.0
Ca_25437_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.7e-11 72.8 104 38.5
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 7.4e-11 72.4 163 29.4
Ca_18178_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.6e-11 72.0 110 31.8
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-10 71.6 165 31.5
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-10 70.9 175 29.1
VMungo1215G1209 Vigna mungo HOM05D000374 ORTHO05D000238 2.1e-10 70.9 131 29.8
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-10 70.5 184 29.9
vmacro03392 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 2.8e-10 70.5 154 32.5
vmacro16050 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 2.8e-10 70.5 154 32.5
Ca_06912_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.7e-10 70.1 175 30.3
Ca_10886_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 4.8e-10 69.7 125 30.4
Ca_13503_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 6.2e-10 69.3 170 27.1
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-10 69.3 185 30.3
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-10 69.3 157 31.2
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 8.2e-10 68.9 161 26.7
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 8.2e-10 68.9 183 29.5
Ca_01899_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.1e-09 68.6 118 33.1
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-09 68.6 167 30.5
Ca_14679_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.4e-09 68.2 106 28.3
Hma1.2p1_1995F.1_g310310 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.4e-09 68.2 159 26.4
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.8e-09 67.8 187 27.3
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 3.1e-09 67.0 180 30.0
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 4.1e-09 66.6 161 26.1
Ca_13973_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 5.3e-09 66.2 215 25.1
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 5.3e-09 66.2 167 30.5
Ca_23052_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 6.9e-09 65.9 170 28.8
Ca_27088_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.9e-09 65.9 78 43.6
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 6.9e-09 65.9 175 27.4
Ca_07982_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.0e-08 64.3 130 30.0
Ca_06407_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.6e-08 63.9 90 35.6
Lj4A312T8 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-08 63.9 111 36.0
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-08 63.9 167 29.9
Ca_02917_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.4e-08 63.5 141 28.4
Ca_02919_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.4e-08 63.5 141 28.4
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-08 63.5 92 39.1
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 4.5e-08 63.2 224 25.9
Ca_13126_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 5.8e-08 62.8 96 33.3
Ca_26303_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.6e-08 62.4 89 37.1
Ca_04892_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.0e-07 62.0 75 42.7
Ah.01g016400 Amaranthus hybridus HOM05D000176 ORTHO05D000106 1.3e-07 61.6 157 30.6
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-07 61.2 144 31.2
EL10Ac2g02712 Beta vulgaris HOM05D000176 ORTHO05D000106 2.2e-07 60.8 157 28.0
EL10Ac5g12113 Beta vulgaris HOM05D000176 ORTHO05D002183 2.2e-07 60.8 159 27.7
EL10Ac7g17342 Beta vulgaris HOM05D000176 ORTHO05D000106 2.2e-07 60.8 157 27.4
EL10Ac7g17344 Beta vulgaris HOM05D000176 ORTHO05D000106 2.2e-07 60.8 157 27.4
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-07 60.5 183 27.9
TPR.G28073 Trifolium pratense HOM05D000176 ORTHO05D000106 2.9e-07 60.5 182 24.7
EL10Ac9g21153 Beta vulgaris HOM05D000176 ORTHO05D000106 3.8e-07 60.1 159 28.3
Ca_03687_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.0e-07 59.7 114 28.9
Ca_07725_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.0e-07 59.7 87 36.8
Ah.01g016230 Amaranthus hybridus HOM05D000176 ORTHO05D000106 6.5e-07 59.3 157 28.7
Ca_01588_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.5e-07 59.3 131 29.8
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 8.4e-07 58.9 163 27.6
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 8.4e-07 58.9 122 32.0
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-06 58.5 157 28.7
Aqoxy2G02523 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 1.4e-06 58.2 165 27.3
Ca_12158_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.4e-06 58.2 121 27.3
Ca_13267_v3 Cicer arietinum L. HOM05D002198 ORTHO05D002183 1.4e-06 58.2 77 36.4
EL10Ac6g14114 Beta vulgaris HOM05D000176 ORTHO05D000106 2.5e-06 57.4 157 27.4
Ca_06560_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.5e-06 57.4 130 28.5
Rhsim05G0112400 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.5e-06 57.4 130 27.7
EL10Ac3g06558 Beta vulgaris HOM05D000176 ORTHO05D000106 3.2e-06 57.0 154 27.9
EL10Ac4g08651 Beta vulgaris HOM05D000176 ORTHO05D000106 3.2e-06 57.0 154 27.9
EL10As6g23633 Beta vulgaris HOM05D000176 ORTHO05D000106 3.2e-06 57.0 154 26.0
Ca_01582_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.2e-06 57.0 122 27.9
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-06 57.0 123 30.1
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 4.2e-06 56.6 152 28.3
EL10Ac4g08649 Beta vulgaris HOM05D000176 ORTHO05D000106 5.5e-06 56.2 136 27.2
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-06 56.2 128 28.1
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-06 56.2 189 25.4
Aqoxy2G01940 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 7.2e-06 55.8 91 34.1
Lj2A87G47 Lonicera japonica HOM05D000176 ORTHO05D000106 7.2e-06 55.8 89 36.0
EL10Ac1g01877 Beta vulgaris HOM05D018751 ORTHO05D012560 9.3e-06 55.5 180 25.6
Lj3A581T20 Lonicera japonica HOM05D000176 ORTHO05D000106 9.3e-06 55.5 164 26.8


User provided reference genes

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