Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0013336 Lotus japonicus HOM05D007706 ORTHO05D009593 7.3e-161 570.9 369 100.0
VMungo1383G0992 Vigna mungo HOM05D007706 ORTHO05D009593 7.7e-86 321.6 367 69.8
Glyma.03G167200 Glycine max HOM05D007706 ORTHO05D009593 8.0e-83 311.6 282 62.8
Glyma.19G168300 Glycine max HOM05D007706 ORTHO05D009593 2.8e-80 303.1 281 60.1
Phvul.001G164700 Phaseolus vulgaris HOM05D007706 ORTHO05D009593 1.8e-79 300.4 367 59.4
arahy.Tifrunner.gnm1.ann1.NJ5037 Arachis hypogaea HOM05D007706 ORTHO05D009593 6.4e-72 275.4 379 64.4
arahy.Tifrunner.gnm1.ann1.S77KHM Arachis hypogaea HOM05D007706 ORTHO05D009593 1.6e-70 270.8 377 64.2
Ca_08742_v3 Cicer arietinum L. HOM05D007706 ORTHO05D009593 1.3e-69 267.7 379 64.6
TPR.G20053 Trifolium pratense HOM05D007706 ORTHO05D009593 1.2e-67 261.2 288 58.3
Ca_08762_v3 Cicer arietinum L. HOM05D003225 ORTHO05D009593 6.2e-67 258.8 347 64.8
Ca_30216_v3 Cicer arietinum L. HOM05D003225 ORTHO05D003818 1.8e-66 257.3 342 64.9
TPR.G30860 Trifolium pratense HOM05D003225 ORTHO05D003818 4.0e-66 256.1 389 64.8
Psat3g051920 Pisum sativum HOM05D007706 ORTHO05D009593 1.7e-64 250.8 378 65.1
Psat3g053960 Pisum sativum HOM05D007706 ORTHO05D009593 2.7e-62 243.4 375 64.5
Medtr7g098450 Medicago truncatula HOM05D007706 ORTHO05D009593 9.5e-60 235.0 287 55.7
Lalb_Chr20g0113631 Lupinus albus HOM05D007706 ORTHO05D009593 3.6e-59 233.0 376 62.2
Medtr7g099260 Medicago truncatula HOM05D007706 ORTHO05D009593 6.8e-58 228.8 382 62.8
QL09p041349 Quercus lobata HOM05D007706 ORTHO05D009593 4.4e-49 199.5 286 49.0
Haze_24704 Corylus avellana HOM05D007706 ORTHO05D009593 2.9e-48 196.8 291 49.5
CiPaw.04G190500 Carya illinoinensis HOM05D007706 ORTHO05D009593 4.9e-48 196.1 292 47.6
Potri.002G256900 Populus trichocarpa HOM05D007706 ORTHO05D009593 3.3e-44 183.3 294 48.6
Cfa002482 Carpinus fangiana HOM05D007706 ORTHO05D009593 5.3e-42 176.0 291 44.7
Duzib138G1124 Durio zibethinus HOM05D007706 ORTHO05D009593 6.9e-42 175.6 295 47.5
Thecc.01G250700 Theobroma cacao HOM05D007706 ORTHO05D009593 1.1e-39 168.3 298 45.3
Sabra02G0195300 Salix brachista HOM05D007706 ORTHO05D009593 3.2e-39 166.8 292 44.2
Duzib133G1528 Durio zibethinus HOM05D007706 ORTHO05D009593 9.3e-39 165.2 293 44.4
Dinv16399 Davidia involucrata HOM05D007706 ORTHO05D009593 4.6e-38 162.9 294 41.2
Rhsim13G0040100 Rhododendron simsii HOM05D007706 ORTHO05D009593 4.6e-38 162.9 295 46.8
CSS0048547 Camellia sinensis var. sinensis HOM05D007706 ORTHO05D009593 6.0e-38 162.5 296 43.2
MD05G1189100 Malus domestica HOM05D007706 ORTHO05D009593 1.5e-36 157.9 295 42.4
PGR031G0475 Punica granatum HOM05D007706 ORTHO05D009593 9.6e-36 155.2 283 45.6
TWI12G0795 Tripterygium wilfordii HOM05D007706 ORTHO05D009593 3.6e-35 153.3 284 42.6
Ciclev10020687m.g Citrus clementina HOM05D007706 ORTHO05D009593 8.1e-35 152.1 286 43.4
Nn1g02965 Nelumbo nucifera HOM05D007706 ORTHO05D009593 3.4e-33 146.7 305 43.3
CiPaw.03G270700 Carya illinoinensis HOM05D007706 ORTHO05D009593 4.5e-33 146.4 285 44.2
ECA236G0985 Erigeron canadensis HOM05D007706 ORTHO05D009593 1.7e-32 144.4 284 40.8
Dinv34676 Davidia involucrata HOM05D007706 ORTHO05D009593 2.2e-32 144.1 300 40.7
Lj2C1142T11 Lonicera japonica HOM05D007706 ORTHO05D009593 3.8e-32 143.3 285 40.0
Prupe.8G215700 Prunus persica HOM05D007706 ORTHO05D009593 3.8e-32 143.3 291 40.9
Manes.12G037850 Manihot esculenta HOM05D007706 ORTHO05D009593 6.4e-32 142.5 293 44.0
Hma1.2p1_1930F.1_g307940 Hydrangea macrophylla HOM05D007706 ORTHO05D009593 8.4e-32 142.1 290 40.0
Gohir.D07G210400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 5.4e-31 139.4 312 41.7
Nn3g19784 Nelumbo nucifera HOM05D007706 ORTHO05D009593 1.2e-30 138.3 295 40.7
Eucgr.A01320 Eucalyptus grandis HOM05D007706 ORTHO05D009593 2.1e-30 137.5 297 41.4
FAN27G2030 Fragaria x ananassa HOM05D007706 ORTHO05D009593 4.6e-30 136.3 284 42.6
Lsat_1_v5_gn_8_92000 Lactuca sativa HOM05D007706 ORTHO05D009593 7.9e-30 135.6 281 43.1
Gohir.A07G204400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 3.0e-29 133.7 306 42.5
TAR362G1069 Trochodendron aralioides HOM05D007706 ORTHO05D009593 3.0e-29 133.7 297 41.1
Gorai.001G237800 Gossypium raimondii HOM05D007706 ORTHO05D009593 3.9e-29 133.3 310 41.0
SalBow4G1824 Salvia bowleyana HOM05D007706 ORTHO05D009593 3.3e-28 130.2 284 40.8
Aqoxy5G00146 Aquilegia oxysepala HOM05D007706 ORTHO05D009593 7.4e-28 129.0 293 37.5
vmacro02710 Vaccinium macrocarpon HOM05D007706 ORTHO05D009593 7.4e-28 129.0 301 39.2
RcHm_v2.0_Chr6g0286691 Rosa chinensis HOM05D007706 ORTHO05D009593 9.6e-28 128.6 286 41.3
Cc01_g17810 Coffea canephora HOM05D007706 ORTHO05D009593 1.4e-26 124.8 285 40.0
Nitab4.5_0007992g0040 Nicotiana tabacum HOM05D007706 ORTHO05D009593 1.4e-26 124.8 293 41.0
Solyc09g064630.3 Solanum lycopersicum HOM05D007706 ORTHO05D009593 4.0e-26 123.2 294 38.4
Sopen09g025790 Solanum pennellii HOM05D007706 ORTHO05D009593 5.3e-26 122.9 294 38.8
PGSC0003DMG400008584 Solanum tuberosum HOM05D007706 ORTHO05D009593 1.5e-25 121.3 294 38.8
Migut.D00475 Erythranthe guttata HOM05D007706 ORTHO05D009593 3.4e-25 120.2 290 39.0
Migut.N02230 Erythranthe guttata HOM05D007706 ORTHO05D009593 1.7e-24 117.9 290 37.6
Cpa.g.sc87.26 Carica papaya HOM05D007706 ORTHO05D009593 6.5e-24 115.9 294 37.1
MSTRG.18353 Avicennia marina HOM05D007706 ORTHO05D009593 1.4e-23 114.8 310 36.8
HanXRQChr04g0108691 Helianthus annuus HOM05D007706 ORTHO05D009593 1.4e-23 114.8 288 39.2
MBI07_g23229_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 2.5e-23 114.0 291 38.5
FvH4_2g20530 Fragaria vesca HOM05D007706 ORTHO05D009593 4.2e-23 113.2 284 39.8
FAN24G1454 Fragaria x ananassa HOM05D007706 ORTHO05D009593 4.2e-23 113.2 284 39.8
FAN15G0362 Fragaria x ananassa HOM05D007706 ORTHO05D009593 5.5e-23 112.8 288 38.9
CsaV3_6G007370 Cucumis sativus L. HOM05D007706 ORTHO05D009593 3.5e-22 110.2 291 36.1
PSO541G4538 Papaver somniferum HOM05D007706 ORTHO05D009593 1.0e-21 108.6 291 34.4
CANSAT01G1705 Cannabis sativa HOM05D007706 ORTHO05D009593 1.3e-21 108.2 285 35.8
Ah.15g092610 Amaranthus hybridus HOM05D007706 ORTHO05D009593 3.9e-21 106.7 282 34.0
GSVIVG01027919001 Vitis vinifera HOM05D006910 ORTHO05D008937 6.7e-21 105.9 294 38.4
EL10Ac7g17683 Beta vulgaris HOM05D007706 ORTHO05D009593 7.4e-20 102.4 288 32.6
AUR62008796 Chenopodium quinoa HOM05D007706 ORTHO05D009593 7.4e-20 102.4 281 34.2
Peaxi162Scf00043g02924 Petunia axillaris HOM05D007706 ORTHO05D009593 3.7e-19 100.1 230 39.1
SGA_v2.0_scaffold1G00652 Striga asiatica HOM05D007706 ORTHO05D009593 4.8e-19 99.8 290 37.9
PSO675G7213 Papaver somniferum HOM05D007706 ORTHO05D009593 1.4e-18 98.2 291 33.7
Lalb_Chr01g0019491 Lupinus albus HOM05D007706 ORTHO05D009593 1.5e-17 94.7 109 55.0
MBI10_g26041_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 4.5e-17 93.2 291 32.0
Prupe.1G049000 Prunus persica HOM05D006910 ORTHO05D008937 5.8e-17 92.8 301 34.2
MELO3C022390.2 Cucumis melo HOM05D007706 ORTHO05D009593 1.0e-16 92.0 290 36.2
Duzib151G0386 Durio zibethinus HOM05D006910 ORTHO05D008937 1.7e-16 91.3 291 34.0
Atru.chr4.1910 Acer truncatum HOM05D006910 ORTHO05D008937 2.2e-16 90.9 294 32.7
Gohir.A10G107300 Gossypium hirsutum HOM05D006910 ORTHO05D008937 3.8e-16 90.1 298 32.6
PSO782G3886 Papaver somniferum HOM05D006910 ORTHO05D009593 5.0e-16 89.7 289 33.9
Gorai.011G179800 Gossypium raimondii HOM05D006910 ORTHO05D008937 2.7e-14 84.0 302 31.5
Gohir.D10G160000 Gossypium hirsutum HOM05D006910 ORTHO05D008937 6.1e-14 82.8 292 31.8
Dinv29800 Davidia involucrata HOM05D006910 ORTHO05D008937 1.1e-12 78.6 327 31.5
Os03g0140700 Oryza sativa ssp. japonica HOM05D007706 ORTHO05D009593 3.3e-12 77.0 292 33.9
HPP92_022478 Vanilla planifolia HOM05D007706 ORTHO05D009593 7.4e-12 75.9 286 31.8
PSO478G1200 Papaver somniferum HOM05D006910 ORTHO05D009593 1.6e-11 74.7 232 33.6
Haze_11463 Corylus avellana HOM05D006910 ORTHO05D008937 2.2e-11 74.3 288 31.2
CDE11G0528 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 1.1e-10 72.0 291 30.2
CSS0021483 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 2.4e-10 70.9 314 29.3
Manes.03G158500 Manihot esculenta HOM05D006910 ORTHO05D008937 2.4e-10 70.9 281 28.5
SalBow7G0697 Salvia bowleyana HOM05D007706 ORTHO05D009593 4.1e-10 70.1 282 32.6
SEGI_40436 Sequoiadendron giganteum HOM05D052464 ORTHO05D009593 6.9e-10 69.3 306 28.8
Sopen12g010960 Solanum pennellii HOM05D000004 ORTHO05D009593 6.9e-10 69.3 179 35.8
ClCG06G001430 Citrullus lanatus HOM05D007706 ORTHO05D009593 9.0e-10 68.9 288 33.0
CSS0004989 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 3.4e-09 67.0 283 29.3
COL.COLO4_10568 Corchorus olitorius HOM05D007706 ORTHO05D009593 7.7e-09 65.9 49 65.3
Actinidia37550 Actinidia chinensis HOM05D006910 ORTHO05D008937 1.0e-08 65.5 115 41.7
CDE05G1228 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 1.7e-08 64.7 212 31.6
Sabra08G0131500 Salix brachista HOM05D006910 ORTHO05D008937 3.8e-08 63.5 303 28.4
Sed0022884 Sechium edule HOM05D007706 ORTHO05D009593 6.5e-08 62.8 218 31.7
Nitab4.5_0000845g0230 Nicotiana tabacum HOM05D007706 ORTHO05D009593 8.5e-08 62.4 81 48.1
CANSAT78G1020 Cannabis sativa HOM05D006910 ORTHO05D008937 1.4e-07 61.6 311 30.9
Oeu026810.1 Olea europaea HOM05D007706 ORTHO05D009593 1.4e-07 61.6 84 54.8
PSO675G2181 Papaver somniferum HOM05D007706 ORTHO05D009593 1.4e-07 61.6 235 31.9
Ciclev10004771m.g Citrus clementina HOM05D006910 ORTHO05D008937 1.9e-07 61.2 283 30.4
Peaxi162Scf00319g00521 Petunia axillaris HOM05D006910 ORTHO05D008937 1.9e-07 61.2 298 30.9
vmacro15481 Vaccinium macrocarpon HOM05D006910 ORTHO05D008937 4.2e-07 60.1 49 61.2
Actinidia30127 Actinidia chinensis HOM05D007706 ORTHO05D009593 3.6e-06 57.0 69 49.3
ATR0787G077 Amborella trichopoda HOM05D007706 ORTHO05D009593 6.1e-06 56.2 296 28.7
CSS0027831 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 6.1e-06 56.2 76 43.4
Dinv27116 Davidia involucrata HOM05D006910 ORTHO05D008937 7.9e-06 55.8 76 46.1


User provided reference genes

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