Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 1.3e-51 206.1 102 100.0
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 3.9e-48 194.5 102 91.2
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 1.1e-47 193.0 103 93.2
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 1.5e-47 192.6 103 93.2
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 2.6e-47 191.8 102 90.2
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 1.3e-46 189.5 103 91.3
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 1.7e-46 189.1 102 88.2
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 1.7e-46 189.1 102 89.2
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 1.7e-46 189.1 102 89.2
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 3.1e-45 184.9 102 86.3
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 6.5e-43 177.2 107 78.5
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 1.5e-42 176.0 107 77.6
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 3.2e-42 174.9 107 78.5
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.6e-41 172.6 101 79.2
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.6e-41 172.6 101 79.2
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 1.6e-41 172.6 101 79.2
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 8.0e-41 170.2 102 77.5
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 1.8e-40 169.1 101 78.2
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 2.3e-40 168.7 102 76.5
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 5.2e-40 167.5 108 75.0
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 1.2e-39 166.4 101 78.2
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 1.5e-39 166.0 102 74.5
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 2.0e-39 165.6 101 75.2
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 2.0e-39 165.6 101 76.2
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 5.7e-39 164.1 105 73.3
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 5.7e-39 164.1 102 74.5
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 9.7e-39 163.3 101 74.3
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 9.7e-39 163.3 101 74.3
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 3.7e-38 161.4 96 78.1
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 3.7e-38 161.4 101 74.3
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 4.8e-38 161.0 101 73.3
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 1.4e-37 159.5 104 73.1
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 1.8e-37 159.1 100 75.0
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 3.1e-37 158.3 107 69.2
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 4.1e-37 157.9 100 74.0
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 9.1e-37 156.8 108 69.4
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 9.1e-37 156.8 108 69.4
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.2e-36 156.4 108 68.5
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 1.6e-36 156.0 107 70.1
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 2.7e-36 155.2 95 73.7
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 4.5e-36 154.5 100 72.0
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 5.9e-36 154.1 100 73.0
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 7.7e-36 153.7 95 73.7
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 7.7e-36 153.7 100 72.0
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 1.0e-35 153.3 96 74.0
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 1.0e-35 153.3 100 71.0
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 1.0e-35 153.3 96 72.9
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 1.0e-35 153.3 81 91.4
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 1.3e-35 152.9 107 68.2
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 1.7e-35 152.5 96 70.8
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 2.9e-35 151.8 102 69.6
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 2.9e-35 151.8 96 71.9
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 2.9e-35 151.8 96 71.9
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 2.9e-35 151.8 96 71.9
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 2.9e-35 151.8 95 72.6
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 2.9e-35 151.8 96 72.9
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 3.8e-35 151.4 95 72.6
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 3.8e-35 151.4 96 71.9
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 3.8e-35 151.4 96 71.9
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 5.0e-35 151.0 96 71.9
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 5.0e-35 151.0 96 70.8
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 6.5e-35 150.6 110 66.4
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 6.5e-35 150.6 93 73.1
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 8.5e-35 150.2 96 70.8
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 8.5e-35 150.2 92 73.9
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 1.1e-34 149.8 93 75.3
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 1.5e-34 149.4 107 66.4
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 4.2e-34 147.9 80 88.8
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 4.2e-34 147.9 96 69.8
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 7.2e-34 147.1 95 71.6
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 1.6e-33 146.0 92 70.7
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 1.6e-33 146.0 137 55.5
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 2.1e-33 145.6 103 69.9
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 2.7e-33 145.2 96 69.8
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 2.7e-33 145.2 103 68.9
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 2.7e-33 145.2 103 68.0
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 4.7e-33 144.4 96 68.8
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 4.7e-33 144.4 103 69.9
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 4.7e-33 144.4 103 69.9
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 6.1e-33 144.1 103 69.9
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 8.0e-33 143.7 95 68.4
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 1.0e-32 143.3 96 72.9
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 1.4e-32 142.9 101 70.3
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 4.0e-32 141.4 99 68.7
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 6.8e-32 140.6 105 64.8
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 8.8e-32 140.2 145 51.7
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 8.8e-32 140.2 92 69.6
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 1.5e-31 139.4 90 70.0
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 2.0e-31 139.0 98 65.3
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 2.6e-31 138.7 103 66.0
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 4.4e-31 137.9 96 65.6
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 9.8e-31 136.7 80 82.5
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 6.3e-30 134.0 87 74.7
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 6.3e-30 134.0 86 77.9
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 7.0e-29 130.6 80 75.0
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 1.6e-28 129.4 88 71.6
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 2.9e-27 125.2 99 61.6
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 5.0e-27 124.4 91 62.6
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 1.1e-26 123.2 88 64.8
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 4.2e-26 121.3 82 70.7
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 4.2e-26 121.3 91 60.4
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 2.3e-24 115.5 82 68.3
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 3.4e-23 111.7 95 54.7
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 9.8e-23 110.2 78 65.4
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.7e-22 109.4 77 68.8
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 3.7e-22 108.2 88 55.7
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 6.3e-22 107.5 87 63.2
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 9.2e-21 103.6 71 70.4
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 1.2e-17 93.2 53 75.5
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 2.1e-17 92.4 71 59.2
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 2.8e-17 92.0 56 73.2
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 6.8e-16 87.4 50 74.0
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 2.7e-12 75.5 53 73.6
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 6.0e-12 74.3 52 63.5
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 1.9e-10 69.3 53 66.0
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 8.0e-09 63.9 50 60.0


User provided reference genes

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