Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 1.6e-103 379.4 189 100.0
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 2.0e-77 292.7 193 79.8
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 2.4e-75 285.8 191 77.0
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 1.3e-73 280.0 188 76.1
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 5.0e-73 278.1 188 77.1
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 1.6e-71 273.1 170 80.6
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 8.0e-71 270.8 189 74.1
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 1.0e-70 270.4 190 74.2
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 4.9e-68 261.5 187 72.2
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 8.3e-68 260.8 144 88.9
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 1.1e-67 260.4 187 73.3
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 1.7e-65 253.1 193 69.9
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 1.2e-63 246.9 142 84.5
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 5.8e-61 238.0 176 72.7
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 4.9e-60 235.0 186 69.4
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 1.4e-59 233.4 154 77.3
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 1.4e-59 233.4 186 68.8
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 1.4e-59 233.4 158 73.4
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 2.4e-59 232.6 143 79.0
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 1.2e-58 230.3 186 68.3
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 2.1e-58 229.6 186 68.3
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 2.7e-58 229.2 174 69.0
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 6.0e-58 228.0 182 67.0
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 1.0e-57 227.3 192 66.1
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 1.3e-57 226.9 186 66.1
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 1.3e-57 226.9 189 67.2
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 1.3e-57 226.9 182 67.0
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 1.7e-57 226.5 176 69.3
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 2.3e-57 226.1 144 75.0
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 3.0e-57 225.7 123 87.0
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 3.9e-57 225.3 184 68.5
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 5.1e-57 224.9 180 67.8
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 5.1e-57 224.9 143 76.2
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 1.1e-56 223.8 159 70.4
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 1.9e-56 223.0 140 77.9
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 1.9e-56 223.0 145 74.5
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 7.3e-56 221.1 131 80.2
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 1.2e-55 220.3 124 85.5
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 1.2e-55 220.3 188 64.4
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 1.2e-55 220.3 198 62.1
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 1.6e-55 219.9 177 67.8
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 3.6e-55 218.8 148 72.3
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 3.6e-55 218.8 181 64.6
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 4.7e-55 218.4 184 62.5
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 8.1e-55 217.6 162 65.4
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 1.4e-54 216.9 138 77.5
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 1.4e-54 216.9 180 61.7
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 1.8e-54 216.5 145 72.4
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 2.3e-54 216.1 186 62.9
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 2.3e-54 216.1 123 84.6
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 2.3e-54 216.1 186 63.4
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 5.2e-54 214.9 131 79.4
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 6.8e-54 214.5 153 73.2
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 1.2e-53 213.8 150 71.3
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 1.5e-53 213.4 185 63.2
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 1.5e-53 213.4 196 61.2
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 2.0e-53 213.0 183 61.7
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 2.6e-53 212.6 120 85.0
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 2.6e-53 212.6 150 71.3
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 3.4e-53 212.2 145 71.0
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 3.4e-53 212.2 145 71.0
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 4.4e-53 211.8 169 65.1
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 4.4e-53 211.8 137 74.5
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 5.8e-53 211.5 127 80.3
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 5.8e-53 211.5 136 76.5
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 7.5e-53 211.1 119 81.5
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 1.3e-52 210.3 192 60.9
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 2.2e-52 209.5 187 61.5
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 2.2e-52 209.5 149 71.8
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 2.9e-52 209.1 163 64.4
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 2.9e-52 209.1 178 64.0
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 2.9e-52 209.1 119 80.7
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 3.7e-52 208.8 179 64.2
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 4.9e-52 208.4 117 82.1
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 4.9e-52 208.4 118 82.2
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 6.4e-52 208.0 158 66.5
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 6.4e-52 208.0 118 81.4
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 8.3e-52 207.6 181 60.2
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 1.1e-51 207.2 186 60.2
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 1.1e-51 207.2 189 58.7
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 1.9e-51 206.5 121 79.3
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 2.4e-51 206.1 178 64.0
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 7.1e-51 204.5 170 63.5
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 9.2e-51 204.1 193 59.6
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 1.6e-50 203.4 187 59.9
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 2.1e-50 203.0 149 71.1
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 1.3e-49 200.3 148 68.9
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 8.6e-49 197.6 184 58.7
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 7.3e-48 194.5 154 64.9
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 3.1e-46 189.1 186 52.7
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 4.0e-46 188.7 137 68.6
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 5.2e-46 188.3 184 53.8
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 8.9e-46 187.6 121 70.2
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 1.2e-45 187.2 121 75.2
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 2.6e-45 186.0 171 54.4
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 7.6e-45 184.5 172 59.3
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 2.9e-44 182.6 199 58.3
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 3.2e-43 179.1 120 69.2
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 4.2e-43 178.7 140 60.7
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 2.7e-42 176.0 159 59.7
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 7.8e-42 174.5 173 55.5
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 5.1e-41 171.8 152 55.3
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 8.1e-39 164.5 121 65.3
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 1.3e-36 157.1 126 61.1
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 1.1e-35 154.1 119 60.5
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 6.0e-34 148.3 134 52.2
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 7.8e-34 147.9 128 56.2
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 4.3e-24 115.5 61 86.9
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 2.4e-22 109.8 83 68.7
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 4.0e-22 109.0 123 51.2
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 6.9e-22 108.2 83 67.5
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 1.2e-21 107.5 128 48.4
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 3.8e-20 102.4 57 80.7
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 1.9e-19 100.1 119 45.4
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 5.6e-16 88.6 62 66.1
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 1.0e-12 77.8 103 50.5


User provided reference genes

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