Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0012526 Lotus japonicus HOM05D007574 ORTHO05D007552 1.6e-45 185.7 90 100.0
Lj1g0014408 Lotus japonicus HOM05D007574 ORTHO05D007552 6.8e-36 153.7 90 84.4
Phvul.008G115600 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 9.9e-27 123.2 93 73.1
Glyma.18G187300 Glycine max HOM05D007574 ORTHO05D007552 3.2e-25 118.2 95 68.4
Glyma.07G136800 Glycine max HOM05D007574 ORTHO05D007552 6.6e-23 110.5 91 65.9
Lalb_Chr01g0022701 Lupinus albus HOM05D007574 ORTHO05D007552 1.1e-22 109.8 90 60.0
TPR.G27329 Trifolium pratense HOM05D007574 ORTHO05D007552 1.6e-21 105.9 91 62.6
Medtr7g063490 Medicago truncatula HOM05D007574 ORTHO05D007552 8.1e-21 103.6 91 60.4
Glyma.03G067200 Glycine max HOM05D007574 ORTHO05D007552 1.1e-20 103.2 95 54.7
Lalb_Chr03g0042511 Lupinus albus HOM05D007574 ORTHO05D007552 1.8e-20 102.4 90 58.9
Glyma.01G102300 Glycine max HOM05D007574 ORTHO05D007552 4.0e-20 101.3 95 56.8
Lalb_Chr19g0125161 Lupinus albus HOM05D007574 ORTHO05D007552 1.2e-19 99.8 85 62.4
Lj3g0003670 Lotus japonicus HOM05D007574 ORTHO05D007552 1.9e-17 92.4 100 53.0
MELO3C009230.2 Cucumis melo HOM05D007574 ORTHO05D007552 9.2e-17 90.1 93 55.9
Manes.08G080600 Manihot esculenta HOM05D007574 ORTHO05D007552 1.6e-16 89.4 98 49.0
Manes.09G095800 Manihot esculenta HOM05D007574 ORTHO05D007552 1.6e-16 89.4 94 52.1
ClCG10G021430 Citrullus lanatus HOM05D007574 ORTHO05D007552 1.3e-15 86.3 92 51.1
CsaV3_3G034590 Cucumis sativus L. HOM05D007574 ORTHO05D007552 1.3e-15 86.3 90 53.3
Ciclev10013212m.g Citrus clementina HOM05D007574 ORTHO05D007552 1.9e-14 82.4 91 52.7
Potri.006G090100 Populus trichocarpa HOM05D007574 ORTHO05D007552 1.9e-14 82.4 98 52.0
QL07p028963 Quercus lobata HOM05D007574 ORTHO05D007552 1.9e-14 82.4 98 52.0
QL07p029642 Quercus lobata HOM05D007574 ORTHO05D007552 1.9e-14 82.4 98 52.0
Thecc.05G033200 Theobroma cacao HOM05D007574 ORTHO05D007552 2.5e-14 82.0 100 50.0
Phvul.010G016401 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 4.3e-14 81.3 94 44.7
Eucgr.B02706 Eucalyptus grandis HOM05D007574 ORTHO05D007552 1.6e-13 79.3 102 46.1
Potri.016G101900 Populus trichocarpa HOM05D007574 ORTHO05D007552 2.1e-13 79.0 99 49.5
CiPaw.09G197900 Carya illinoinensis HOM05D007574 ORTHO05D007552 3.6e-13 78.2 96 50.0
PGR031G1556 Punica granatum HOM05D007574 ORTHO05D007552 8.1e-13 77.0 103 45.6
Atru.chr8.2045 Acer truncatum HOM05D007574 ORTHO05D007552 1.8e-12 75.9 92 44.6
Sabra06G0068200 Salix brachista HOM05D007574 ORTHO05D007552 2.4e-12 75.5 101 48.5
TWI77G0884 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 2.4e-12 75.5 91 44.0
CiPaw.10G148000 Carya illinoinensis HOM05D007574 ORTHO05D007552 1.2e-11 73.2 105 47.6
TWI53G1464 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 2.0e-11 72.4 89 43.8
Atru.chr8.2052 Acer truncatum HOM05D007574 ORTHO05D007552 2.6e-11 72.0 92 43.5
Dinv37135 Davidia involucrata HOM05D007574 ORTHO05D007552 2.6e-11 72.0 80 50.0
Duzib128G0069 Durio zibethinus HOM05D007574 ORTHO05D007552 3.4e-11 71.6 93 48.4
Medtr4g021330 Medicago truncatula HOM05D007574 ORTHO05D007552 7.6e-11 70.5 94 43.6
MD12G1149400 Malus domestica HOM05D007574 ORTHO05D007552 9.9e-11 70.1 86 50.0
Sed0004598 Sechium edule HOM05D007574 ORTHO05D007552 2.2e-10 68.9 92 44.6
MD04G1135900 Malus domestica HOM05D007574 ORTHO05D007552 3.8e-10 68.2 91 46.2
Eucgr.K03060 Eucalyptus grandis HOM05D007574 ORTHO05D007552 2.4e-09 65.5 100 40.0
Duzib106G1300 Durio zibethinus HOM05D007574 ORTHO05D007552 5.4e-09 64.3 90 46.7
Gohir.D04G123600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 5.4e-09 64.3 104 44.2
TPR.G5586 Trifolium pratense HOM05D007574 ORTHO05D007552 5.4e-09 64.3 94 48.9
GSVIVG01034109001 Vitis vinifera HOM05D007574 ORTHO05D007552 5.4e-09 64.3 93 37.6
Aqoxy2G02344 Aquilegia oxysepala HOM05D007574 ORTHO05D007552 9.3e-09 63.5 99 40.4
Hma1.2p1_0766F.1_g215190 Hydrangea macrophylla HOM05D007574 ORTHO05D007552 1.2e-08 63.2 69 50.7
FAN05G1951 Fragaria x ananassa HOM05D007574 ORTHO05D007552 1.6e-08 62.8 96 41.7
PGSC0003DMG400019195 Solanum tuberosum HOM05D007574 ORTHO05D007552 1.6e-08 62.8 87 46.0
FAN09G4076 Fragaria x ananassa HOM05D007574 ORTHO05D007552 2.7e-08 62.0 86 43.0
MBI05_g35175_MAGBIO Magnolia biondii HOM05D007574 ORTHO05D007552 4.6e-08 61.2 95 38.9
Cpa.g.c39617 Carica papaya HOM05D007574 ORTHO05D007552 6.0e-08 60.8 94 42.6
Gorai.012G106400 Gossypium raimondii HOM05D007574 ORTHO05D007552 6.0e-08 60.8 104 43.3
Rhsim05G0198100 Rhododendron simsii HOM05D007574 ORTHO05D007552 6.0e-08 60.8 99 38.4
RcHm_v2.0_Chr3g0465351 Rosa chinensis HOM05D007574 ORTHO05D007552 6.0e-08 60.8 96 40.6
DCAR_012128 Daucus carota HOM05D007574 ORTHO05D007552 1.3e-07 59.7 80 43.8
CSS0039527 Camellia sinensis var. sinensis HOM05D007574 ORTHO05D007552 1.7e-07 59.3 97 39.2
Prupe.6G261000 Prunus persica HOM05D007574 ORTHO05D007552 1.7e-07 59.3 84 42.9
Gohir.A04G084700 Gossypium hirsutum HOM05D007574 ORTHO05D007552 2.3e-07 58.9 106 41.5
TAR633G0850 Trochodendron aralioides HOM05D007574 ORTHO05D007552 5.1e-07 57.8 90 37.8
Nn2g11240 Nelumbo nucifera HOM05D007574 ORTHO05D007552 1.1e-06 56.6 92 40.2
Nn2g13483 Nelumbo nucifera HOM05D007574 ORTHO05D007552 1.1e-06 56.6 93 37.6
Rhsim05G0196100 Rhododendron simsii HOM05D007574 ORTHO05D007552 1.1e-06 56.6 100 34.0
Peaxi162Scf00330g00113 Petunia axillaris HOM05D007574 ORTHO05D007552 1.5e-06 56.2 95 43.2
AUR62027719 Chenopodium quinoa HOM05D007574 ORTHO05D007552 3.3e-06 55.1 88 40.9
Sc01g0004620 Simmondsia chinensis HOM05D007574 ORTHO05D007552 7.3e-06 53.9 80 40.0
Oeu001849.1 Olea europaea HOM05D007574 ORTHO05D007552 9.6e-06 53.5 78 42.3
TAR623G1460 Trochodendron aralioides HOM05D007574 ORTHO05D007552 9.6e-06 53.5 99 39.4
HPP92_019232 Vanilla planifolia HOM05D007574 ORTHO05D007552 9.6e-06 53.5 49 49.0


User provided reference genes

Program Settings