Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 0.0e+00 1100.1 539 100.0
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 5.9e-260 900.6 540 79.3
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 1.8e-245 852.4 539 74.8
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 5.9e-244 847.4 539 74.0
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 1.3e-243 846.3 539 75.3
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 3.0e-240 835.1 542 74.5
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 1.3e-238 829.7 539 73.1
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 6.3e-238 827.4 542 74.0
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 2.5e-234 815.5 539 72.9
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 9.8e-231 803.5 542 73.1
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 8.1e-209 730.7 544 64.7
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 1.4e-205 719.9 570 61.6
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 9.2e-205 717.2 543 63.5
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 1.5e-202 709.9 544 63.1
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 6.2e-201 704.5 469 71.4
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 8.4e-198 694.1 546 61.7
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 1.1e-197 693.7 543 61.7
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 7.1e-197 691.0 543 61.7
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 1.6e-196 689.9 544 61.6
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 5.1e-195 684.9 543 60.6
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 8.7e-195 684.1 550 60.9
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 7.3e-194 681.0 543 60.4
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 2.4e-192 676.0 544 60.1
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 4.0e-192 675.2 543 59.9
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 9.0e-192 674.1 544 59.9
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 2.9e-190 669.1 542 59.6
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 8.4e-190 667.5 544 61.8
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 3.2e-189 665.6 543 58.7
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 4.2e-189 665.2 543 58.7
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 9.3e-189 664.1 545 60.0
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 1.2e-188 663.7 546 59.3
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 2.7e-188 662.5 543 58.2
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 4.6e-188 661.8 544 59.4
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 8.7e-187 657.5 543 56.0
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 1.3e-185 653.7 543 55.6
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 9.9e-183 644.0 545 58.3
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 1.1e-181 640.6 545 58.3
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 2.5e-181 639.4 550 56.7
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 3.2e-181 639.0 544 56.8
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 7.1e-181 637.9 551 56.4
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 7.1e-181 637.9 545 58.3
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 7.1e-181 637.9 544 56.2
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 1.2e-180 637.1 550 56.9
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 3.9e-179 632.1 545 57.8
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 1.5e-178 630.2 544 57.7
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 2.5e-178 629.4 550 56.0
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 7.4e-178 627.9 546 56.2
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 3.7e-177 625.5 547 56.7
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 1.4e-176 623.6 547 56.1
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 2.4e-176 622.9 547 56.3
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 4.5e-175 618.6 542 55.9
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 5.8e-175 618.2 548 55.8
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 1.3e-174 617.1 544 57.5
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 1.3e-174 617.1 544 56.6
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 1.3e-174 617.1 544 56.8
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 3.8e-174 615.5 548 55.7
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 1.1e-173 614.0 542 55.5
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 1.4e-173 613.6 548 55.7
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 1.4e-173 613.6 543 55.8
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 2.5e-173 612.8 544 56.1
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 2.5e-173 612.8 545 55.6
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 3.5e-172 609.0 543 54.0
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 7.9e-172 607.8 566 53.7
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 6.7e-171 604.7 545 54.1
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 8.7e-171 604.4 636 49.5
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 9.7e-170 600.9 546 53.3
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 6.9e-168 594.7 542 54.8
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 6.9e-168 594.7 548 54.6
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 9.0e-168 594.3 539 54.5
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 1.2e-167 594.0 538 53.5
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 1.5e-167 593.6 473 61.3
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 2.0e-167 593.2 545 55.0
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 2.6e-167 592.8 575 51.1
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 1.0e-166 590.9 545 55.4
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 1.3e-166 590.5 545 53.4
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 1.1e-165 587.4 543 53.0
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 2.5e-165 586.3 546 54.4
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 4.2e-165 585.5 544 53.5
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 7.2e-165 584.7 605 50.9
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 4.6e-164 582.0 543 52.5
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 1.0e-158 564.3 494 55.7
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 3.8e-158 562.4 552 52.4
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 1.1e-157 560.8 552 52.2
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 1.6e-156 557.0 547 52.3
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 2.1e-156 556.6 526 53.6
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 3.9e-155 552.4 492 55.5
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 1.3e-153 547.4 431 61.5
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 5.3e-152 542.0 595 48.1
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 9.1e-152 541.2 561 50.6
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 8.5e-150 534.6 465 54.4
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 3.6e-148 529.3 546 50.2
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.8e-136 490.3 449 54.6
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 1.0e-134 484.6 565 47.1
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 5.0e-134 482.3 558 47.0
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 2.7e-132 476.5 470 50.6
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 8.3e-129 464.9 541 48.1
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 5.9e-127 458.8 556 45.0
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 2.2e-113 413.7 501 41.5
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 2.7e-111 406.8 315 62.2
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 2.1e-103 380.6 403 47.4
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 2.2e-97 360.5 544 38.1
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 3.3e-93 346.7 209 79.4
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 2.6e-90 337.0 537 36.3
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 3.2e-88 330.1 582 36.3
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 4.6e-87 326.2 581 35.1
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 1.3e-86 324.7 574 35.9
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 4.2e-80 303.1 470 38.3
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 9.6e-77 292.0 226 60.6
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 1.4e-48 198.4 250 40.4
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 4.8e-44 183.3 174 52.9
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 7.7e-42 176.0 108 72.2
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 5.3e-35 153.3 126 59.5
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 2.9e-33 147.5 200 42.0
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 2.4e-27 127.9 76 77.6
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 2.2e-25 121.3 119 51.3
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 6.5e-17 93.2 60 63.3
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 3.4e-13 80.9 101 46.5
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 1.1e-08 65.9 43 74.4
ATR0370G001 Amborella trichopoda HOM05D006698 ORTHO05D008415 4.7e-07 60.5 52 55.8


User provided reference genes

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