Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 1.3e-88 330.1 222 100.0
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 8.5e-72 274.2 172 79.1
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 1.1e-71 273.9 173 78.0
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 4.2e-71 271.9 170 78.8
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 4.2e-71 271.9 170 78.8
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 5.5e-71 271.6 170 77.6
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 1.2e-70 270.4 172 76.7
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 4.7e-70 268.5 172 75.0
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 2.3e-69 266.2 173 77.5
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 3.0e-69 265.8 173 76.9
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 2.6e-68 262.7 172 75.0
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 3.4e-68 262.3 172 75.0
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 7.5e-68 261.2 170 75.9
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 1.3e-67 260.4 173 75.1
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 1.7e-67 260.0 169 76.3
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 2.8e-67 259.2 173 74.0
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 2.8e-67 259.2 172 72.7
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 4.8e-67 258.5 173 73.4
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 6.3e-67 258.1 172 73.8
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 6.3e-67 258.1 172 72.1
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 8.3e-67 257.7 170 73.5
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 1.1e-66 257.3 175 73.7
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 1.4e-66 256.9 170 73.5
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 1.4e-66 256.9 170 74.7
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 2.4e-66 256.1 172 73.3
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 2.4e-66 256.1 170 73.5
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 3.1e-66 255.8 170 73.5
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 3.1e-66 255.8 170 75.9
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 3.1e-66 255.8 169 75.1
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 7.0e-66 254.6 172 73.8
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 9.1e-66 254.2 173 71.1
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 1.2e-65 253.8 172 73.3
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 1.6e-65 253.4 172 71.5
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 2.0e-65 253.1 177 71.2
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 2.0e-65 253.1 177 71.2
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 2.0e-65 253.1 177 71.2
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 2.7e-65 252.7 169 73.4
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 7.7e-65 251.1 170 75.9
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 7.7e-65 251.1 170 75.9
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 1.3e-64 250.4 170 71.2
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 1.3e-64 250.4 170 72.4
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 1.7e-64 250.0 170 71.2
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 2.9e-64 249.2 170 71.8
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 2.9e-64 249.2 170 71.8
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 2.9e-64 249.2 170 71.8
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 2.9e-64 249.2 172 71.5
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 3.8e-64 248.8 175 69.7
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 5.0e-64 248.4 173 72.3
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 5.0e-64 248.4 172 69.8
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 6.5e-64 248.1 169 72.2
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 8.5e-64 247.7 172 71.5
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 8.5e-64 247.7 172 71.5
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 1.9e-63 246.5 173 69.9
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 1.9e-63 246.5 172 71.5
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 2.5e-63 246.1 172 70.9
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 3.2e-63 245.7 173 69.9
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 3.2e-63 245.7 173 71.1
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 3.2e-63 245.7 170 72.4
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 4.2e-63 245.4 172 69.2
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 4.2e-63 245.4 172 70.9
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 4.2e-63 245.4 172 69.8
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 5.5e-63 245.0 173 69.4
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 9.5e-63 244.2 174 69.5
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 9.5e-63 244.2 173 71.1
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 9.5e-63 244.2 173 71.1
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 9.5e-63 244.2 173 71.1
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 9.5e-63 244.2 173 71.1
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 9.5e-63 244.2 165 73.3
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 1.2e-62 243.8 169 71.6
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 1.2e-62 243.8 172 70.3
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 1.6e-62 243.4 172 69.8
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 1.6e-62 243.4 158 75.9
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 1.6e-62 243.4 173 69.4
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 2.1e-62 243.0 173 72.3
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 2.1e-62 243.0 172 69.2
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 2.7e-62 242.7 169 71.6
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 3.6e-62 242.3 169 72.2
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 1.8e-61 240.0 170 69.4
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 2.0e-60 236.5 173 69.4
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 2.0e-60 236.5 173 69.4
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 1.7e-59 233.4 172 66.9
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 1.7e-59 233.4 169 66.9
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 6.3e-59 231.5 171 68.4
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 1.1e-58 230.7 152 75.0
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 9.2e-58 227.6 173 65.9
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 7.7e-57 224.6 173 67.6
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 1.0e-56 224.2 170 65.9
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 3.8e-56 222.2 169 65.7
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 6.6e-56 221.5 150 75.3
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.5e-55 220.3 173 67.1
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.5e-55 220.3 173 67.1
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 2.5e-55 219.5 171 65.5
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 7.3e-55 218.0 171 64.3
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 1.2e-54 217.2 172 60.5
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 1.0e-53 214.2 153 69.9
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 3.0e-53 212.6 151 72.8
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 3.4e-52 209.1 171 62.0
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 1.7e-51 206.8 169 62.7
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 1.7e-51 206.8 173 57.2
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 1.7e-51 206.8 173 57.2
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 1.2e-49 200.7 169 62.7
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 3.9e-48 195.7 170 57.1
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 1.9e-47 193.4 175 54.9
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 1.6e-46 190.3 141 67.4
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 2.3e-45 186.4 136 70.6
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 5.4e-42 175.3 125 72.8
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 3.5e-41 172.6 108 75.0
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 1.9e-39 166.8 171 48.0
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 3.3e-39 166.0 109 70.6
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 2.9e-35 152.9 104 71.2
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 1.0e-32 144.4 124 62.9
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 2.7e-25 119.8 81 74.1
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 1.3e-19 100.9 174 36.8
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 5.6e-15 85.5 47 83.0
Cre03.g198850 Chlamydomonas reinhardtii HOM05D006848 ORTHO05D008445 1.4e-13 80.9 175 28.0
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 1.5e-12 77.4 174 32.2
A04p00030 Brassica napus HOM05D006848 ORTHO05D008445 3.6e-06 56.2 51 52.9


User provided reference genes

Program Settings