Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0010364 Lotus japonicus HOM05D007041 ORTHO05D008036 1.0e-54 216.5 105 100.0
Glyma.19G254100 Glycine max HOM05D007041 ORTHO05D008036 1.2e-15 86.7 97 52.6
Ca_09497_v3 Cicer arietinum L. HOM05D007041 ORTHO05D008036 3.5e-15 85.1 99 47.5
Medtr7g117120 Medicago truncatula HOM05D007041 ORTHO05D008036 2.2e-14 82.4 100 53.0
Lalb_Chr17g0342361 Lupinus albus HOM05D007041 ORTHO05D008036 1.6e-12 76.3 100 48.0
Glyma.16G026800 Glycine max HOM05D007041 ORTHO05D008036 1.5e-10 69.7 99 40.4
Lalb_Chr18g0044291 Lupinus albus HOM05D007041 ORTHO05D008036 2.0e-10 69.3 99 41.4
Medtr8g027905 Medicago truncatula HOM05D001941 ORTHO05D008036 6.3e-09 64.3 99 44.4
Lj3g0003817 Lotus japonicus HOM05D007041 ORTHO05D008036 1.8e-08 62.8 101 43.6
Gohir.D08G147100 Gossypium hirsutum HOM05D007041 ORTHO05D008036 3.1e-08 62.0 105 41.0
Gorai.004G152600 Gossypium raimondii HOM05D007041 ORTHO05D008036 3.1e-08 62.0 105 41.0
Atru.chr5.628 Acer truncatum HOM05D007041 ORTHO05D008036 4.1e-08 61.6 110 39.1
Glyma.07G057800 Glycine max HOM05D007041 ORTHO05D008036 7.0e-08 60.8 103 39.8
Medtr8g027915 Medicago truncatula HOM05D007041 ORTHO05D008036 7.0e-08 60.8 78 47.4
Phvul.010G111500 Phaseolus vulgaris HOM05D007041 ORTHO05D008036 7.0e-08 60.8 109 36.7
Nn1g01816 Nelumbo nucifera HOM05D007041 ORTHO05D008036 9.2e-08 60.5 96 38.5
CiPaw.02G039100 Carya illinoinensis HOM05D007041 ORTHO05D008036 1.6e-07 59.7 89 36.0
vmacro22516 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 1.6e-07 59.7 94 33.0
arahy.Tifrunner.gnm1.ann1.3XXF02 Arachis hypogaea HOM05D007041 ORTHO05D008036 2.0e-07 59.3 110 39.1
CiPaw.01G073300 Carya illinoinensis HOM05D007041 ORTHO05D008036 3.5e-07 58.5 36 63.9
Potri.002G168300 Populus trichocarpa HOM05D007041 ORTHO05D008036 3.5e-07 58.5 100 38.0
CSS0039531 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 4.5e-07 58.2 67 38.8
TPR.G7661 Trifolium pratense HOM05D007041 ORTHO05D008036 4.5e-07 58.2 98 43.9
Rhsim07G0006100 Rhododendron simsii HOM05D000337 ORTHO05D000297 7.7e-07 57.4 98 35.7
Rhsim01G0170200 Rhododendron simsii HOM05D007041 ORTHO05D008036 1.0e-06 57.0 100 37.0
Medtr8g027305 Medicago truncatula HOM05D007041 ORTHO05D008036 1.7e-06 56.2 36 58.3
vmacro22515 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 2.3e-06 55.8 96 35.4
Oeu007854.1 Olea europaea HOM05D007041 ORTHO05D008036 3.8e-06 55.1 31 64.5
FAN06G3979 Fragaria x ananassa HOM05D007041 ORTHO05D008036 5.0e-06 54.7 36 58.3
TPR.G7659 Trifolium pratense HOM05D007041 ORTHO05D008036 5.0e-06 54.7 98 34.7
Nitab4.5_0007594g0010 Nicotiana tabacum HOM05D007041 ORTHO05D008036 8.6e-06 53.9 98 33.7
Rhsim01G0170500 Rhododendron simsii HOM05D007041 ORTHO05D008036 8.6e-06 53.9 97 35.1
Sc01g0010130 Simmondsia chinensis HOM05D007041 ORTHO05D008036 8.6e-06 53.9 35 62.9
VMungo0331G1585 Vigna mungo HOM05D007041 ORTHO05D008036 8.6e-06 53.9 100 32.0


User provided reference genes

Program Settings