Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0010131 Lotus japonicus HOM05D005616 ORTHO05D006975 1.1e-153 546.6 276 100.0
Lj6g0010776 Lotus japonicus HOM05D005616 ORTHO05D006975 4.8e-141 504.6 276 92.8
Lalb_Chr08g0231681 Lupinus albus HOM05D005616 ORTHO05D006975 5.9e-131 471.1 276 85.5
TPR.G11210 Trifolium pratense HOM05D005616 ORTHO05D006975 1.1e-129 466.8 276 85.9
Medtr3g070890 Medicago truncatula HOM05D005616 ORTHO05D006975 9.4e-129 463.8 276 85.1
Glyma.18G026400 Glycine max HOM05D005616 ORTHO05D006975 5.2e-127 458.0 273 83.9
Medtr3g449480 Medicago truncatula HOM05D005616 ORTHO05D006975 9.8e-126 453.8 271 84.9
Psat5g129880 Pisum sativum HOM05D005616 ORTHO05D006975 1.3e-125 453.4 276 84.1
Glyma.11G230900 Glycine max HOM05D005616 ORTHO05D006975 4.8e-125 451.4 276 81.9
Phvul.001G244100 Phaseolus vulgaris HOM05D005616 ORTHO05D006975 4.2e-121 438.3 275 80.4
Ca_15132_v3 Cicer arietinum L. HOM05D005616 ORTHO05D006975 2.6e-118 429.1 254 84.6
VMungo1383G1171 Vigna mungo HOM05D005616 ORTHO05D006975 3.0e-111 405.6 281 74.0
Haze_17234 Corylus avellana HOM05D005616 ORTHO05D006975 5.4e-108 394.8 276 71.0
FAN07G0068 Fragaria x ananassa HOM05D005616 ORTHO05D006975 3.9e-106 388.7 278 70.1
Lj8A66T51 Lonicera japonica HOM05D005616 ORTHO05D006975 8.0e-104 380.9 276 68.8
Gohir.A04G093400 Gossypium hirsutum HOM05D005616 ORTHO05D006975 1.4e-103 380.2 277 70.8
CSS0029859 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 3.1e-103 379.0 276 66.3
Dinv10614 Davidia involucrata HOM05D005616 ORTHO05D006975 3.1e-103 379.0 276 67.0
Gorai.012G116600 Gossypium raimondii HOM05D005616 ORTHO05D006975 3.1e-103 379.0 273 70.7
FvH4_4g21980 Fragaria vesca HOM05D005616 ORTHO05D006975 8.9e-103 377.5 278 68.7
MD07G1223000 Malus domestica HOM05D005616 ORTHO05D006975 1.2e-102 377.1 277 67.1
Ciclev10032361m.g Citrus clementina HOM05D005616 ORTHO05D006975 1.5e-102 376.7 279 68.8
GSVIVG01032805001 Vitis vinifera HOM05D005616 ORTHO05D006975 3.4e-102 375.6 278 68.3
arahy.Tifrunner.gnm1.ann1.061K9L Arachis hypogaea HOM05D005616 ORTHO05D006975 5.8e-102 374.8 204 90.7
Manes.10G011400 Manihot esculenta HOM05D005616 ORTHO05D006975 5.8e-102 374.8 276 67.8
arahy.Tifrunner.gnm1.ann1.R92L2M Arachis hypogaea HOM05D005616 ORTHO05D006975 9.8e-102 374.0 205 89.3
Prupe.2G251100 Prunus persica HOM05D005616 ORTHO05D006975 1.3e-101 373.6 277 68.2
FAN03G0254 Fragaria x ananassa HOM05D005616 ORTHO05D006975 1.4e-100 370.2 278 67.3
RcHm_v2.0_Chr1g0370411 Rosa chinensis HOM05D005616 ORTHO05D006975 5.4e-100 368.2 277 67.1
FvH4_7g24571 Fragaria vesca HOM05D005616 ORTHO05D006975 1.6e-99 366.7 278 68.0
FAN12G0831 Fragaria x ananassa HOM05D005616 ORTHO05D006975 2.7e-99 365.9 254 71.3
FAN01G0309 Fragaria x ananassa HOM05D001932 ORTHO05D006975 4.6e-99 365.2 275 66.9
Thecc.10G015200 Theobroma cacao HOM05D005616 ORTHO05D006975 1.7e-98 363.2 277 66.1
FAN06G2993 Fragaria x ananassa HOM05D001932 ORTHO05D006975 2.3e-98 362.8 275 68.0
Sabra08G0051100 Salix brachista HOM05D005616 ORTHO05D006975 3.9e-98 362.1 276 66.3
Potri.008G069500 Populus trichocarpa HOM05D005616 ORTHO05D006975 1.1e-97 360.5 276 65.9
TWI09G1208 Tripterygium wilfordii HOM05D005616 ORTHO05D006975 2.5e-97 359.4 276 65.6
TAR623G1070 Trochodendron aralioides HOM05D005616 ORTHO05D006975 7.3e-97 357.8 265 69.4
FAN10G3671 Fragaria x ananassa HOM05D005616 ORTHO05D006975 1.2e-96 357.1 254 69.7
Gohir.A10G237500 Gossypium hirsutum HOM05D005616 ORTHO05D006975 6.2e-96 354.8 271 68.3
Cfa001309 Carpinus fangiana HOM05D005616 ORTHO05D006975 8.1e-96 354.4 207 82.6
Duzib128G0549 Durio zibethinus HOM05D005616 ORTHO05D006975 1.1e-95 354.0 277 64.6
Sc10g0002410 Simmondsia chinensis HOM05D005616 ORTHO05D006975 1.4e-95 353.6 276 64.9
Migut.F00691 Erythranthe guttata HOM05D005616 ORTHO05D006975 3.1e-95 352.4 276 65.6
vmacro06962 Vaccinium macrocarpon HOM05D005616 ORTHO05D006975 3.1e-95 352.4 277 63.5
HanXRQChr08g0222401 Helianthus annuus HOM05D005616 ORTHO05D006975 6.8e-95 351.3 276 65.2
MSTRG.8961 Avicennia marina HOM05D005616 ORTHO05D006975 1.2e-94 350.5 276 64.5
Cc02_g06410 Coffea canephora HOM05D005616 ORTHO05D006975 1.2e-94 350.5 272 65.1
Nitab4.5_0005018g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 1.2e-94 350.5 232 74.6
PSO384G3782 Papaver somniferum HOM05D005616 ORTHO05D006975 1.2e-94 350.5 276 64.9
Potri.012G145600 Populus trichocarpa HOM05D005616 ORTHO05D006975 1.5e-94 350.1 252 69.4
Nitab4.5_0003454g0010 Nicotiana tabacum HOM05D005616 ORTHO05D006975 4.4e-94 348.6 239 72.8
Eucgr.J00201 Eucalyptus grandis HOM05D005616 ORTHO05D006975 2.2e-93 346.3 238 71.8
Aa31LG11G6640 Aethionema arabicum HOM05D005616 ORTHO05D006975 3.7e-93 345.5 268 64.2
PSO339G0515 Papaver somniferum HOM05D005616 ORTHO05D006975 3.7e-93 345.5 276 64.5
ECA233G4091 Erigeron canadensis HOM05D005616 ORTHO05D006975 4.9e-93 345.1 276 63.0
SalBow6G5046 Salvia bowleyana HOM05D005616 ORTHO05D006975 1.4e-92 343.6 234 72.2
Peaxi162Scf00801g00729 Petunia axillaris HOM05D005616 ORTHO05D006975 4.1e-92 342.0 272 64.7
Sp6g37270 Schrenkiella parvula HOM05D005616 ORTHO05D006975 4.1e-92 342.0 274 62.8
THA.LOC104816542 Tarenaya hassleriana HOM05D005616 ORTHO05D006975 4.1e-92 342.0 276 62.3
Peaxi162Scf00284g01041 Petunia axillaris HOM05D005616 ORTHO05D006975 5.4e-92 341.7 276 65.2
AUR62012260 Chenopodium quinoa HOM05D005616 ORTHO05D006975 7.1e-92 341.3 214 76.2
CiPaw.02G193000 Carya illinoinensis HOM05D005616 ORTHO05D006975 9.2e-92 340.9 245 68.2
Sed0025730 Sechium edule HOM05D005616 ORTHO05D006975 2.1e-91 339.7 277 62.8
MELO3C026789.2 Cucumis melo HOM05D005616 ORTHO05D006975 2.7e-91 339.3 238 70.2
Thhalv10014368m.g Eutrema salsugineum HOM05D005616 ORTHO05D006975 2.7e-91 339.3 276 62.0
DCAR_023439 Daucus carota HOM05D005616 ORTHO05D006975 3.5e-91 339.0 216 74.1
PGSC0003DMG400010237 Solanum tuberosum HOM05D005616 ORTHO05D006975 3.5e-91 339.0 275 64.0
Lsat_1_v5_gn_8_11701 Lactuca sativa HOM05D005616 ORTHO05D006975 4.6e-91 338.6 242 69.8
Solyc02g076760.3 Solanum lycopersicum HOM05D005616 ORTHO05D006975 6.0e-91 338.2 215 75.3
Carub.0006s0449 Capsella rubella HOM05D005616 ORTHO05D006975 7.8e-91 337.8 261 64.0
Oeu004695.1 Olea europaea HOM05D005616 ORTHO05D006975 1.0e-90 337.4 234 71.8
Gorai.011G289500 Gossypium raimondii HOM05D005616 ORTHO05D006975 1.3e-90 337.0 276 64.9
AL6G15480 Arabidopsis lyrata HOM05D005616 ORTHO05D006975 1.7e-90 336.7 263 63.1
AT1G07780 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 1.7e-90 336.7 276 59.8
Gohir.D04G132700 Gossypium hirsutum HOM05D005616 ORTHO05D006975 1.7e-90 336.7 245 69.4
AT5G05590 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 2.3e-90 336.3 276 59.8
Solyc06g051410.4 Solanum lycopersicum HOM05D005616 ORTHO05D006975 2.3e-90 336.3 274 64.2
CsaV3_5G010220 Cucumis sativus L. HOM05D005616 ORTHO05D006975 3.0e-90 335.9 277 62.5
Gohir.D10G249200 Gossypium hirsutum HOM05D005616 ORTHO05D006975 3.0e-90 335.9 276 64.9
PSO675G8834 Papaver somniferum HOM05D005616 ORTHO05D006975 3.0e-90 335.9 275 62.2
CSS0002000 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 5.1e-90 335.1 207 75.4
ClCG07G004280 Citrullus lanatus HOM05D005616 ORTHO05D006975 1.5e-89 333.6 238 68.5
PSO017G0320 Papaver somniferum HOM05D005616 ORTHO05D006975 1.5e-89 333.6 228 71.1
Sopen02g021670 Solanum pennellii HOM05D005616 ORTHO05D006975 1.5e-89 333.6 215 74.0
EL10Ac1g02124 Beta vulgaris HOM05D005616 ORTHO05D006975 3.3e-89 332.4 222 71.6
Sopen06g017380 Solanum pennellii HOM05D005616 ORTHO05D006975 3.3e-89 332.4 240 69.6
AUR62022893 Chenopodium quinoa HOM05D005616 ORTHO05D006975 4.3e-89 332.0 220 73.2
Aqoxy4G02536 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 7.3e-89 331.3 283 62.9
CARHR034480 Cardamine hirsuta HOM05D005616 ORTHO05D006975 9.5e-89 330.9 255 63.9
SGA_v2.0_scaffold60G21012 Striga asiatica HOM05D005616 ORTHO05D006975 1.6e-88 330.1 222 70.3
SGA_v2.0_scaffold105G30487 Striga asiatica HOM05D005616 ORTHO05D006975 8.1e-88 327.8 215 71.6
CANSAT78G1638 Cannabis sativa HOM05D005616 ORTHO05D006975 1.8e-87 326.6 247 66.4
Hund13869 Selenicereus undatus HOM05D005616 ORTHO05D006975 2.4e-87 326.2 218 72.0
PGSC0003DMG401008474 Solanum tuberosum HOM05D005616 ORTHO05D006975 3.1e-87 325.9 240 68.3
CSS0019139 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 1.2e-86 323.9 207 73.4
COL.COLO4_25743 Corchorus olitorius HOM05D005616 ORTHO05D006975 1.2e-86 323.9 250 65.2
MBI19_g36756_MAGBIO Magnolia biondii HOM05D005616 ORTHO05D006975 2.6e-86 322.8 223 70.4
BcaB05g21694 Brassica carinata HOM05D005616 ORTHO05D006975 8.4e-85 317.8 254 63.4
BraA02t04856Z Brassica rapa HOM05D005616 ORTHO05D006975 1.1e-84 317.4 254 63.4
PGR044G0338 Punica granatum HOM05D005616 ORTHO05D006975 2.4e-84 316.2 204 75.0
BcaB05g21698 Brassica carinata HOM05D005616 ORTHO05D006975 3.2e-84 315.8 256 63.7
BolC2t06207H Brassica oleracea HOM05D005616 ORTHO05D006975 1.6e-83 313.5 276 58.7
Nitab4.5_0010803g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 2.7e-83 312.8 205 75.6
Aqoxy5G03614 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 8.1e-80 301.2 196 76.5
ATR0730G169 Amborella trichopoda HOM05D005616 ORTHO05D006975 2.4e-79 299.7 260 61.9
SHI03421 Sapria himalayana HOM05D005616 ORTHO05D006975 1.2e-78 297.4 224 65.6
AUR62028615 Chenopodium quinoa HOM05D005616 ORTHO05D006975 6.4e-77 291.6 229 65.5
unitig_0.g2023 Utricularia gibba HOM05D005616 ORTHO05D006975 2.7e-75 286.2 186 73.7
HPP92_011508 Vanilla planifolia HOM05D005616 ORTHO05D006975 1.3e-74 283.9 232 59.9
Os02g0266000 Oryza sativa ssp. japonica HOM05D005616 ORTHO05D006975 4.8e-72 275.4 209 64.6
SEGI_33372 Sequoiadendron giganteum HOM05D005616 ORTHO05D006975 4.8e-72 275.4 208 64.4
TAR369G1110 Trochodendron aralioides HOM05D005616 ORTHO05D006975 4.8e-72 275.4 213 64.8
Zm00001eb203980 Zea mays HOM05D005616 ORTHO05D006975 1.3e-69 267.3 223 61.0
Zm00001eb281510 Zea mays HOM05D005616 ORTHO05D006975 6.4e-69 265.0 251 53.0
Aqoxy332s005 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 4.0e-63 245.7 182 70.9
Mapoly0041s0067 Marchantia polymorpha HOM05D005616 ORTHO05D006975 2.4e-60 236.5 207 55.6
Pp3c17_23550 Physcomitrium patens HOM05D005616 ORTHO05D006975 1.2e-59 234.2 211 55.0
AagrBONN_evm.TU.Sc2ySwM_228.1039 Anthoceros agrestis HOM05D005616 ORTHO05D006975 3.0e-58 229.6 209 54.1
AT1G29410 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 1.9e-57 226.9 200 57.0
CDE02G4500 Ceratophyllum demersum HOM05D005293 ORTHO05D006764 8.2e-56 221.5 192 58.3
SMO364G0619 Selaginella moellendorffii HOM05D005616 ORTHO05D006975 1.4e-55 220.7 212 53.8
CAN.G370.83 Capsicum annuum HOM05D002257 ORTHO05D006975 6.9e-55 218.4 147 74.8
Cre12.g519000 Chlamydomonas reinhardtii HOM05D005616 ORTHO05D006975 2.5e-52 209.9 222 46.4
Dinv21739 Davidia involucrata HOM05D005616 ORTHO05D006975 2.7e-51 206.5 125 76.8
C02p02440 Brassica napus HOM05D005616 ORTHO05D006975 5.7e-49 198.7 177 58.2
MCO02G328 Micromonas commoda HOM05D005616 ORTHO05D006975 1.8e-47 193.7 233 39.1
CiPaw.01G059100 Carya illinoinensis HOM05D005616 ORTHO05D006975 9.4e-44 181.4 109 81.7
PRCOL_00006470 Prasinoderma coloniale HOM05D005616 ORTHO05D006975 4.8e-40 169.1 212 41.5
FAN17G0984 Fragaria x ananassa HOM05D002859 ORTHO05D003120 1.0e-34 151.4 139 59.7
Potri.014G188400 Populus trichocarpa HOM05D005616 ORTHO05D006975 8.8e-34 148.3 130 60.0
Nn2g13147 Nelumbo nucifera HOM05D005616 ORTHO05D006975 1.7e-32 144.1 88 80.7
DCAR_029632 Daucus carota HOM05D000090 ORTHO05D001584 2.6e-25 120.2 91 60.4
MSTRG.13829 Avicennia marina HOM05D005616 ORTHO05D006975 2.2e-24 117.1 88 68.2
CBR_g37169 Chara braunii HOM05D005616 ORTHO05D006975 1.2e-19 101.3 144 38.9
Dinv21738 Davidia involucrata HOM05D005616 ORTHO05D006975 2.6e-17 93.6 65 69.2
Atru.chr12.48 Acer truncatum HOM05D005616 ORTHO05D006975 1.8e-15 87.4 110 46.4
Atru.chr7.2145 Acer truncatum HOM05D005616 ORTHO05D006975 4.7e-11 72.8 56 64.3
Cfa025268 Carpinus fangiana HOM05D003366 ORTHO05D004562 1.4e-10 71.2 247 31.6
SGA_v2.0_scaffold250G44984 Striga asiatica HOM05D005616 ORTHO05D401959 2.7e-06 57.0 60 50.0


User provided reference genes

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