Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0009767 Lotus japonicus HOM05D030494 ORTHO05D010358 0.0e+00 1108.6 549 100.0
Lj1g0011765 Lotus japonicus HOM05D008220 ORTHO05D010358 2.5e-72 277.3 511 34.4
LjContig00081g0006498 Lotus japonicus HOM05D030494 ORTHO05D010358 4.1e-67 260.0 569 32.3
Lj2g0000449 Lotus japonicus HOM05D023130 ORTHO05D236278 6.9e-30 136.3 266 33.5
Lj2g0028189 Lotus japonicus HOM05D030494 ORTHO05D236238 3.1e-22 110.9 349 29.2
LjContig00528g0025001 Lotus japonicus HOM05D030494 ORTHO05D236679 5.3e-22 110.2 358 28.8
Lj6g0021088 Lotus japonicus HOM05D023130 ORTHO05D235970 6.4e-20 103.2 274 31.8
Lj4g0010688 Lotus japonicus HOM05D023130 ORTHO05D236609 1.3e-17 95.5 404 27.7
Lj2g0010122 Lotus japonicus HOM05D008220 ORTHO05D010358 3.9e-17 94.0 193 32.6
Lj3g0018658 Lotus japonicus HOM05D023130 ORTHO05D236308 4.3e-16 90.5 277 30.3
Lj1g0017334 Lotus japonicus HOM05D008220 ORTHO05D010358 9.6e-16 89.4 104 41.3
Lj2g0022307 Lotus japonicus HOM05D008220 ORTHO05D010358 2.8e-15 87.8 180 33.3
Lj5g0015440 Lotus japonicus HOM05D008220 ORTHO05D010358 3.7e-15 87.4 222 28.4
Lj1g0010280 Lotus japonicus HOM05D008220 ORTHO05D010358 4.8e-15 87.0 104 40.4
Lj2g0009989 Lotus japonicus HOM05D008220 ORTHO05D010358 2.4e-14 84.7 145 33.1
LjContig00141g0011294 Lotus japonicus HOM05D008220 ORTHO05D010358 9.0e-14 82.8 143 30.8
Lj1g0001129 Lotus japonicus HOM05D008220 ORTHO05D010358 2.0e-13 81.6 135 31.1
Lj3g0003280 Lotus japonicus HOM05D008220 ORTHO05D010358 5.8e-13 80.1 116 34.5
Lj3g0004063 Lotus japonicus HOM05D008220 ORTHO05D010358 5.8e-13 80.1 183 32.8
Lj1g0010052 Lotus japonicus HOM05D008220 ORTHO05D010358 2.2e-12 78.2 114 31.6
Lj4g0014745 Lotus japonicus HOM05D023355 ORTHO05D236489 3.8e-12 77.4 423 25.1
Lj3g0010325 Lotus japonicus HOM05D008220 ORTHO05D010358 1.1e-11 75.9 117 31.6
Lj1g0002722 Lotus japonicus HOM05D008220 ORTHO05D010358 1.9e-11 75.1 148 34.5
Lj6g0021460 Lotus japonicus HOM05D008220 ORTHO05D010358 2.5e-11 74.7 170 31.2
Lj6g0001371 Lotus japonicus HOM05D008220 ORTHO05D010358 3.2e-11 74.3 117 31.6
Lj6g0011493 Lotus japonicus HOM05D008220 ORTHO05D010358 3.2e-11 74.3 170 30.6
Lj4g0014244 Lotus japonicus HOM05D008220 ORTHO05D010358 1.2e-10 72.4 188 24.5
Lj3g0011116 Lotus japonicus HOM05D008220 ORTHO05D010358 2.1e-10 71.6 129 34.9
Lj2g0017871 Lotus japonicus HOM05D008220 ORTHO05D010358 3.5e-10 70.9 116 32.8
Lj1g0011459 Lotus japonicus HOM05D008220 ORTHO05D010358 7.9e-10 69.7 193 28.0
Lj2g0010794 Lotus japonicus HOM05D008220 ORTHO05D010358 1.3e-09 68.9 125 25.6
Lj4g0013144 Lotus japonicus HOM05D008220 ORTHO05D010358 1.8e-09 68.6 144 29.2
Lj5g0012072 Lotus japonicus HOM05D008220 ORTHO05D010358 1.8e-09 68.6 139 29.5
Lj1g0026317 Lotus japonicus HOM05D008220 ORTHO05D010358 2.3e-09 68.2 116 30.2
LjContig00583g0009142 Lotus japonicus HOM05D008220 ORTHO05D010358 6.7e-09 66.6 117 30.8
TPR.G19363 Trifolium pratense HOM05D002777 ORTHO05D001516 1.9e-08 65.1 112 27.7
TPR.G25363 Trifolium pratense HOM05D007807 ORTHO05D001516 3.3e-08 64.3 112 25.0
Lj2g0013399 Lotus japonicus HOM05D023355 ORTHO05D236500 7.4e-08 63.2 471 21.7
Lj3g0023441 Lotus japonicus HOM05D008220 ORTHO05D010358 7.4e-08 63.2 183 26.2
EL10Ac5g12917 Beta vulgaris HOM05D008976 ORTHO05D011121 9.6e-08 62.8 153 26.8
EL10Ac6g13580 Beta vulgaris HOM05D008976 ORTHO05D011121 9.6e-08 62.8 153 26.8
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 9.6e-08 62.8 191 25.1
Manes.06G033475 Manihot esculenta HOM05D009258 ORTHO05D001516 1.6e-07 62.0 140 27.9
Lj5g0002610 Lotus japonicus HOM05D008220 ORTHO05D010358 2.1e-07 61.6 116 27.6
TPR.G14641 Trifolium pratense HOM05D002777 ORTHO05D001516 2.1e-07 61.6 212 23.6
Lj3g0019996 Lotus japonicus HOM05D008220 ORTHO05D010358 6.3e-07 60.1 198 26.3
Lj1g0018935 Lotus japonicus HOM05D008220 ORTHO05D010358 8.2e-07 59.7 116 27.6
Thecc.09G245100 Theobroma cacao HOM05D009258 ORTHO05D009583 3.1e-06 57.8 99 28.3
Lj4g0014288 Lotus japonicus HOM05D008220 ORTHO05D010358 5.3e-06 57.0 94 30.9
Lj5g0005201 Lotus japonicus HOM05D008220 ORTHO05D010358 6.9e-06 56.6 130 24.6
Lj6g0019563 Lotus japonicus HOM05D008220 ORTHO05D010358 6.9e-06 56.6 98 31.6
Medtr2g060030 Medicago truncatula HOM05D008558 ORTHO05D011658 6.9e-06 56.6 144 27.1
Medtr8g045280 Medicago truncatula HOM05D008558 ORTHO05D001516 6.9e-06 56.6 155 28.4
Lj4g0023050 Lotus japonicus HOM05D008220 ORTHO05D010358 9.0e-06 56.2 160 26.9
LjContig00141g0005868 Lotus japonicus HOM05D008220 ORTHO05D010358 9.0e-06 56.2 127 27.6


User provided reference genes

Program Settings