Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0009603 Lotus japonicus HOM05D009309 ORTHO05D011491 3.4e-19 97.4 53 100.0
Glyma.19G182200 Glycine max HOM05D009309 ORTHO05D011491 8.7e-15 82.8 53 88.7
Glyma.03G181500 Glycine max HOM05D009309 ORTHO05D011491 4.3e-14 80.5 53 86.8
Phvul.001G177600 Phaseolus vulgaris HOM05D009309 ORTHO05D011491 2.8e-13 77.8 53 84.9
Manes.08G008300 Manihot esculenta HOM05D009309 ORTHO05D011491 9.3e-09 62.8 48 70.8
MBI10_g22826_MAGBIO Magnolia biondii HOM05D009309 ORTHO05D011491 1.0e-07 59.3 53 67.9
Cfa017573 Carpinus fangiana HOM05D009309 ORTHO05D011491 1.8e-07 58.5 51 70.6
Dinv37295 Davidia involucrata HOM05D009309 ORTHO05D011491 1.8e-07 58.5 53 64.2
CiPaw.09G174500 Carya illinoinensis HOM05D009309 ORTHO05D011491 2.3e-07 58.2 49 67.3
Lsat_1_v5_gn_2_106500 Lactuca sativa HOM05D007947 ORTHO05D010018 2.3e-07 58.2 46 67.4
Potri.006G127000 Populus trichocarpa HOM05D009309 ORTHO05D011491 2.3e-07 58.2 47 68.1
HanXRQChr14g0454561 Helianthus annuus HOM05D009309 ORTHO05D011491 3.9e-07 57.4 46 60.9
MD12G1117300 Malus domestica HOM05D009309 ORTHO05D011491 5.1e-07 57.0 49 63.3
Nn2g13719 Nelumbo nucifera HOM05D009309 ORTHO05D011491 6.7e-07 56.6 54 68.5
Rhsim05G0179800 Rhododendron simsii HOM05D009309 ORTHO05D011491 6.7e-07 56.6 47 63.8
Gohir.D09G144800 Gossypium hirsutum HOM05D009309 ORTHO05D011491 1.9e-06 55.1 48 70.8
Gorai.006G166100 Gossypium raimondii HOM05D009309 ORTHO05D011491 1.9e-06 55.1 48 70.8
Duzib235G0890 Durio zibethinus HOM05D007947 ORTHO05D010018 2.5e-06 54.7 52 61.5
Prupe.6G235500 Prunus persica HOM05D009309 ORTHO05D011491 2.5e-06 54.7 54 61.1
BcaB07g32795 Brassica carinata HOM05D007947 ORTHO05D010018 4.3e-06 53.9 50 64.0
Ciclev10013303m.g Citrus clementina HOM05D009309 ORTHO05D011491 4.3e-06 53.9 53 62.3
FAN05G3556 Fragaria x ananassa HOM05D009309 ORTHO05D011491 4.3e-06 53.9 52 63.5
MD04G1096300 Malus domestica HOM05D009309 ORTHO05D011491 5.6e-06 53.5 49 65.3
SGA_v2.0_scaffold75G24863 Striga asiatica HOM05D001565 ORTHO05D001725 5.6e-06 53.5 47 63.8
Glyma.14G004800 Glycine max HOM05D007947 ORTHO05D010018 7.4e-06 53.1 50 62.0
THA.LOC109116600 Tarenaya hassleriana HOM05D007947 ORTHO05D010018 7.4e-06 53.1 50 64.0
AT1G31335 Arabidopsis thaliana HOM05D007947 ORTHO05D010018 9.6e-06 52.8 50 62.0
BcaC05g27167 Brassica carinata HOM05D007947 ORTHO05D010018 9.6e-06 52.8 50 62.0
C05p30570 Brassica napus HOM05D007947 ORTHO05D010018 9.6e-06 52.8 50 62.0
BolC5t31792H Brassica oleracea HOM05D007947 ORTHO05D010018 9.6e-06 52.8 50 62.0
Carub.0001s2978 Capsella rubella HOM05D007947 ORTHO05D010018 9.6e-06 52.8 50 62.0
FAN02G2530 Fragaria x ananassa HOM05D009309 ORTHO05D011491 9.6e-06 52.8 52 65.4
Sp1g27170 Schrenkiella parvula HOM05D007947 ORTHO05D010018 9.6e-06 52.8 50 62.0
VMungo0647G0519 Vigna mungo HOM05D000879 ORTHO05D002864 9.6e-06 52.8 52 59.6


User provided reference genes

Program Settings