Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0009560 Lotus japonicus HOM05D011727 ORTHO05D004912 1.6e-61 239.2 119 100.0
VMungo0647G2151 Vigna mungo HOM05D011727 ORTHO05D004912 2.9e-18 95.5 99 55.6
Glyma.13G082350 Glycine max HOM05D011727 ORTHO05D004912 2.5e-17 92.4 120 50.8
Medtr8g468960 Medicago truncatula HOM05D011727 ORTHO05D004912 9.4e-17 90.5 110 56.4
Medtr8g468940 Medicago truncatula HOM05D011727 ORTHO05D004912 6.1e-16 87.8 110 54.5
Phvul.008G166200 Phaseolus vulgaris HOM05D011727 ORTHO05D004912 2.3e-15 85.9 109 52.3
Ca_22861_v3 Cicer arietinum L. HOM05D011727 ORTHO05D004912 2.8e-13 79.0 111 49.5
Glyma.14G163600 Glycine max HOM05D011727 ORTHO05D004912 6.3e-13 77.8 99 51.5
QL05p073125 Quercus lobata HOM05D007398 ORTHO05D004912 9.1e-12 73.9 91 48.4
QL05p073115 Quercus lobata HOM05D007398 ORTHO05D004912 1.3e-10 70.1 91 47.3
Glyma.13G082600 Glycine max HOM05D011727 ORTHO05D004912 5.0e-10 68.2 112 47.3
Phvul.008G166300 Phaseolus vulgaris HOM05D011727 ORTHO05D004912 8.5e-10 67.4 102 48.0
Phvul.008G166400 Phaseolus vulgaris HOM05D011727 ORTHO05D004912 2.5e-09 65.9 85 50.6
Haze_06802 Corylus avellana HOM05D061810 ORTHO05D004912 4.2e-09 65.1 91 44.0
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 2.7e-08 62.4 111 45.9
Migut.H01572 Erythranthe guttata HOM05D011575 ORTHO05D004912 2.7e-08 62.4 82 47.6
Thecc.02G314700 Theobroma cacao HOM05D007398 ORTHO05D004912 2.7e-08 62.4 77 53.2
Migut.M01320 Erythranthe guttata HOM05D011575 ORTHO05D004912 1.4e-07 60.1 98 42.9
AUR62012711 Chenopodium quinoa HOM05D011727 ORTHO05D004912 1.8e-07 59.7 103 43.7
Duzib251G0280 Durio zibethinus HOM05D007398 ORTHO05D004912 2.3e-07 59.3 78 51.3
COL.COLO4_27711 Corchorus olitorius HOM05D007398 ORTHO05D004912 3.0e-07 58.9 77 49.4
Psat5g264000 Pisum sativum HOM05D007398 ORTHO05D004912 3.9e-07 58.5 87 44.8
FAN25G2989 Fragaria x ananassa HOM05D011727 ORTHO05D004912 5.1e-07 58.2 102 43.1
ECA240G1365 Erigeron canadensis HOM05D007398 ORTHO05D004912 6.7e-07 57.8 85 45.9
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 1.5e-06 56.6 108 41.7
MSTRG.7209 Avicennia marina HOM05D011575 ORTHO05D004912 1.5e-06 56.6 90 44.4
Duzib248G0799 Durio zibethinus HOM05D007398 ORTHO05D004912 1.5e-06 56.6 77 50.6
RcHm_v2.0_Chr5g0002951 Rosa chinensis HOM05D011727 ORTHO05D004912 1.5e-06 56.6 102 43.1
unitig_744.g24521 Utricularia gibba HOM05D011575 ORTHO05D004912 1.5e-06 56.6 91 45.1
Cc05_g04620 Coffea canephora HOM05D007398 ORTHO05D004912 2.0e-06 56.2 110 38.2
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 2.6e-06 55.8 87 44.8
Lalb_Chr19g0135871 Lupinus albus HOM05D007398 ORTHO05D004912 3.3e-06 55.5 83 42.2
SalBow8G3401 Salvia bowleyana HOM05D011575 ORTHO05D004912 3.3e-06 55.5 96 41.7
PGSC0003DMG400016452 Solanum tuberosum HOM05D011575 ORTHO05D004912 3.3e-06 55.5 99 40.4
SGA_v2.0_scaffold7G03838 Striga asiatica HOM05D011575 ORTHO05D004912 3.3e-06 55.5 91 42.9
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 5.7e-06 54.7 100 45.0
FAN21G2105 Fragaria x ananassa HOM05D011727 ORTHO05D004912 5.7e-06 54.7 102 42.2
RcHm_v2.0_Chr2g0159281 Rosa chinensis HOM05D007398 ORTHO05D004912 5.7e-06 54.7 87 43.7
PGSC0003DMG400016451 Solanum tuberosum HOM05D011575 ORTHO05D004912 5.7e-06 54.7 96 41.7
Actinidia30523 Actinidia chinensis HOM05D007398 ORTHO05D004912 7.4e-06 54.3 89 47.2
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 7.4e-06 54.3 105 40.0
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 9.7e-06 53.9 101 43.6
FvH4_3g02050 Fragaria vesca HOM05D011727 ORTHO05D004912 9.7e-06 53.9 102 42.2
SGA_v2.0_scaffold4G01914 Striga asiatica HOM05D011575 ORTHO05D004912 9.7e-06 53.9 96 42.7


User provided reference genes

Program Settings