Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0009156 Lotus japonicus HOM05D007911 ORTHO05D009536 0.0e+00 1247.6 642 100.0
Phvul.001G129400 Phaseolus vulgaris HOM05D007911 ORTHO05D009536 9.5e-140 501.5 657 49.3
VMungo1383G2470 Vigna mungo HOM05D007911 ORTHO05D009536 4.6e-134 482.6 662 48.3
arahy.Tifrunner.gnm1.ann1.18RKPD Arachis hypogaea HOM05D007911 ORTHO05D009536 3.7e-128 463.0 666 47.9
Glyma.03G133900 Glycine max HOM05D007911 ORTHO05D009536 8.3e-128 461.8 840 41.1
TPR.G18258 Trifolium pratense HOM05D007911 ORTHO05D009536 2.7e-126 456.8 837 40.6
arahy.Tifrunner.gnm1.ann1.BL1IZ1 Arachis hypogaea HOM05D007911 ORTHO05D009536 3.5e-126 456.4 672 47.5
Glyma.19G136200 Glycine max HOM05D007911 ORTHO05D009536 4.1e-119 433.0 845 38.9
Lalb_Chr01g0017411 Lupinus albus HOM05D007911 ORTHO05D009536 1.4e-114 417.9 695 43.5
Ca_08429_v3 Cicer arietinum L. HOM05D007911 ORTHO05D009536 6.2e-99 365.9 636 41.5
Medtr2g012890 Medicago truncatula HOM05D007911 ORTHO05D009536 7.1e-87 325.9 624 39.9
Psat3g074440 Pisum sativum HOM05D007911 ORTHO05D009536 5.9e-81 306.2 848 32.0
Lalb_Chr25g0287291 Lupinus albus HOM05D007911 ORTHO05D009536 7.5e-52 209.5 227 54.2
Potri.016G043300 Populus trichocarpa HOM05D007911 ORTHO05D009536 7.5e-36 156.4 798 25.8
Manes.08G052400 Manihot esculenta HOM05D007911 ORTHO05D009536 4.9e-35 153.7 724 27.6
Lalb_Chr25g0287301 Lupinus albus HOM05D007911 ORTHO05D009536 6.3e-35 153.3 529 29.7
Prupe.7G054000 Prunus persica HOM05D007911 ORTHO05D009536 9.2e-34 149.4 250 37.6
Gohir.D01G119650 Gossypium hirsutum HOM05D007911 ORTHO05D009536 1.2e-33 149.1 765 26.5
Gohir.A01G130811 Gossypium hirsutum HOM05D007911 ORTHO05D009536 1.6e-33 148.7 770 26.8
Potri.006G046700 Populus trichocarpa HOM05D007911 ORTHO05D009536 1.6e-33 148.7 738 27.8
Medtr7g091040 Medicago truncatula HOM05D007911 ORTHO05D009536 2.7e-33 147.9 142 57.0
Sabra06G0032200 Salix brachista HOM05D007911 ORTHO05D009536 4.5e-33 147.1 775 27.2
CiPaw.09G040100 Carya illinoinensis HOM05D007911 ORTHO05D009536 5.9e-33 146.7 804 26.7
Gorai.002G146100 Gossypium raimondii HOM05D007911 ORTHO05D009536 7.8e-33 146.4 771 26.2
arahy.Tifrunner.gnm1.ann1.XA9LH2 Arachis hypogaea HOM05D007911 ORTHO05D009536 1.0e-32 146.0 160 55.0
Thecc.05G151800 Theobroma cacao HOM05D007911 ORTHO05D009536 2.3e-32 144.8 813 25.3
QL07p003623 Quercus lobata HOM05D007911 ORTHO05D009536 5.6e-31 140.2 429 31.9
CANSAT80G2434 Cannabis sativa HOM05D007911 ORTHO05D009536 7.3e-31 139.8 247 37.7
Duzib093G1996 Durio zibethinus HOM05D007911 ORTHO05D009536 1.6e-30 138.7 247 41.7
TWI53G0905 Tripterygium wilfordii HOM05D007911 ORTHO05D009536 3.6e-30 137.5 674 26.1
CANSAT80G1261 Cannabis sativa HOM05D007911 ORTHO05D009536 4.7e-30 137.1 383 31.1
COL.COLO4_33204 Corchorus olitorius HOM05D007911 ORTHO05D009536 6.1e-30 136.7 229 41.5
Atru.chr1.1239 Acer truncatum HOM05D007911 ORTHO05D009536 8.0e-30 136.3 126 59.5
Haze_19798 Corylus avellana HOM05D007911 ORTHO05D009536 4.0e-29 134.0 194 44.3
VMungo0720G0307 Vigna mungo HOM05D007911 ORTHO05D009536 3.4e-28 131.0 132 53.0
RcHm_v2.0_Chr3g0483481 Rosa chinensis HOM05D020102 ORTHO05D009536 9.8e-28 129.4 140 49.3
Cfa016782 Carpinus fangiana HOM05D007911 ORTHO05D009536 1.7e-27 128.6 264 36.7
Ciclev10006879m.g Citrus clementina HOM05D007911 ORTHO05D009536 2.4e-26 124.8 137 49.6
Duzib106G0073 Durio zibethinus HOM05D007911 ORTHO05D009536 4.6e-25 120.6 138 50.7
FAN09G4584 Fragaria x ananassa HOM05D020102 ORTHO05D009536 1.3e-24 119.0 259 32.0
Atru.chr12.1999 Acer truncatum HOM05D007911 ORTHO05D009536 5.0e-24 117.1 237 39.2
Actinidia39204 Actinidia chinensis HOM05D007911 ORTHO05D009536 3.3e-23 114.4 232 37.1
MELO3C026340.2 Cucumis melo HOM05D007911 ORTHO05D009536 2.1e-22 111.7 661 26.2
ClCG04G003660 Citrullus lanatus HOM05D007911 ORTHO05D009536 1.4e-21 109.0 681 23.5
FvH4_6g24470 Fragaria vesca HOM05D020102 ORTHO05D009536 6.8e-21 106.7 247 31.2
FAN14G4000 Fragaria x ananassa HOM05D020102 ORTHO05D009536 2.6e-20 104.8 247 30.8
Actinidia09304 Actinidia chinensis HOM05D007911 ORTHO05D009536 7.5e-20 103.2 514 28.2
TWI77G0280 Tripterygium wilfordii HOM05D007911 ORTHO05D009536 7.5e-20 103.2 634 26.3
Cpa.g.sc1210.2 Carica papaya HOM05D007911 ORTHO05D009536 6.4e-19 100.1 792 22.9
Eucgr.A02312 Eucalyptus grandis HOM05D007911 ORTHO05D009536 1.1e-18 99.4 147 38.1
PGR004G0024 Punica granatum HOM05D007911 ORTHO05D009536 5.4e-18 97.1 132 44.7
CSS0030068 Camellia sinensis var. sinensis HOM05D007911 ORTHO05D009536 7.0e-18 96.7 209 34.4
Oeu035501.1 Olea europaea HOM05D007911 ORTHO05D009536 7.0e-18 96.7 148 41.9
TAR636G2018 Trochodendron aralioides HOM05D007911 ORTHO05D009536 1.2e-17 95.9 149 40.9
Peaxi162Scf00130g00827 Petunia axillaris HOM05D017238 ORTHO05D009536 1.7e-16 92.0 107 45.8
Nitab4.5_0001618g0290 Nicotiana tabacum HOM05D017238 ORTHO05D009536 2.3e-16 91.7 148 37.2
Nn2g15134 Nelumbo nucifera HOM05D007911 ORTHO05D009536 3.9e-16 90.9 148 37.2
Nitab4.5_0000826g0230 Nicotiana tabacum HOM05D017238 ORTHO05D009536 2.5e-15 88.2 137 37.2
CAN.G676.9 Capsicum annuum HOM05D017238 ORTHO05D009536 1.2e-14 85.9 98 48.0
Rhsim03G0028700 Rhododendron simsii HOM05D007911 ORTHO05D009536 1.2e-14 85.9 204 35.3
SGA_v2.0_scaffold69G23124 Striga asiatica HOM05D007911 ORTHO05D009536 1.6e-14 85.5 113 40.7
Hma1.2p1_0005F.1_g004500 Hydrangea macrophylla HOM05D007911 ORTHO05D009536 2.1e-14 85.1 144 37.5
arahy.Tifrunner.gnm1.ann1.808QWK Arachis hypogaea HOM05D007911 ORTHO05D009536 6.2e-14 83.6 81 55.6
Cc06_g17980 Coffea canephora HOM05D007911 ORTHO05D009536 3.1e-13 81.3 114 39.5
Solyc04g016290.3 Solanum lycopersicum HOM05D017238 ORTHO05D009536 1.2e-12 79.3 137 35.8
Sopen04g008390 Solanum pennellii HOM05D017238 ORTHO05D009536 1.2e-12 79.3 137 36.5
PSO339G2888 Papaver somniferum HOM05D007911 ORTHO05D009536 1.5e-12 79.0 142 36.6
FAN05G5247 Fragaria x ananassa HOM05D020102 ORTHO05D009536 4.4e-12 77.4 96 39.6
vmacro21970 Vaccinium macrocarpon HOM05D007911 ORTHO05D009536 9.9e-12 76.3 329 28.3
Sed0016742 Sechium edule HOM05D007911 ORTHO05D009536 8.3e-11 73.2 107 40.2
EL10Ac3g07134 Beta vulgaris HOM05D021336 ORTHO05D009536 1.9e-10 72.0 105 41.9
SGA_v2.0_scaffold105G30375 Striga asiatica HOM05D007911 ORTHO05D009536 1.9e-10 72.0 145 33.8
Aqoxy1G00297 Aquilegia oxysepala HOM05D007911 ORTHO05D009536 7.1e-10 70.1 108 42.6
Hund24682 Selenicereus undatus HOM05D007911 ORTHO05D009536 7.1e-10 70.1 117 35.9
PSO384G4398 Papaver somniferum HOM05D007911 ORTHO05D009536 1.2e-09 69.3 142 35.2
Lsat_1_v5_gn_9_31060 Lactuca sativa HOM05D007911 ORTHO05D009536 2.7e-09 68.2 110 38.2
SalBow6G1456 Salvia bowleyana HOM05D007911 ORTHO05D009536 4.6e-09 67.4 120 36.7
CsaV3_4G027600 Cucumis sativus L. HOM05D007911 ORTHO05D009536 7.8e-09 66.6 657 22.7
Sc13g0001600 Simmondsia chinensis HOM05D007911 ORTHO05D009536 1.3e-08 65.9 117 37.6
SalBow6G0990 Salvia bowleyana HOM05D007911 ORTHO05D009536 2.3e-08 65.1 120 36.7
HanXRQChr08g0234551 Helianthus annuus HOM05D007911 ORTHO05D009536 3.0e-08 64.7 106 38.7
MSTRG.6410 Avicennia marina HOM05D007911 ORTHO05D009536 1.9e-07 62.0 669 22.1
Nitab4.5_0000677g0260 Nicotiana tabacum HOM05D029882 ORTHO05D009536 7.3e-07 60.1 83 43.4
AUR62024506 Chenopodium quinoa HOM05D021336 ORTHO05D009536 2.8e-06 58.2 78 42.3
Hund19135 Selenicereus undatus HOM05D021336 ORTHO05D009536 4.7e-06 57.4 625 22.6


User provided reference genes

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