Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0008863 Lotus japonicus HOM05D004288 ORTHO05D004997 5.6e-62 240.7 118 100.0
Medtr1g018470 Medicago truncatula HOM05D004288 ORTHO05D004997 4.2e-25 118.2 114 60.5
Medtr1g418505 Medicago truncatula HOM05D004288 ORTHO05D004997 4.2e-25 118.2 114 60.5
Glyma.14G087800 Glycine max HOM05D004288 ORTHO05D004997 9.6e-22 107.1 122 57.4
Glyma.17G236500 Glycine max HOM05D004288 ORTHO05D004997 1.6e-21 106.3 121 56.2
Lj6g0004688 Lotus japonicus HOM05D004288 ORTHO05D004997 3.6e-21 105.1 124 59.7
VMungo0647G1919 Vigna mungo HOM05D004288 ORTHO05D004997 4.8e-21 104.8 120 52.5
Lj3g0011225 Lotus japonicus HOM05D004288 ORTHO05D004997 4.0e-20 101.7 124 57.3
Phvul.001G026500 Phaseolus vulgaris HOM05D004288 ORTHO05D004997 4.0e-20 101.7 121 52.9
CiPaw.08G049000 Carya illinoinensis HOM05D004288 ORTHO05D004997 1.4e-17 93.2 120 47.5
Psat6g015560 Pisum sativum HOM05D004288 ORTHO05D004997 1.4e-17 93.2 114 49.1
CiPaw.07G176600 Carya illinoinensis HOM05D004288 ORTHO05D004997 2.1e-16 89.4 119 45.4
TPR.G11815 Trifolium pratense HOM05D004288 ORTHO05D004997 2.1e-16 89.4 120 46.7
Haze_22316 Corylus avellana HOM05D004288 ORTHO05D004997 2.7e-16 89.0 119 47.9
Cfa013675 Carpinus fangiana HOM05D004288 ORTHO05D004997 6.0e-16 87.8 119 47.1
Phvul.001G026400 Phaseolus vulgaris HOM05D004288 ORTHO05D004997 3.9e-15 85.1 117 47.9
Psat6g016040 Pisum sativum HOM05D004288 ORTHO05D004997 1.5e-14 83.2 124 47.6
Manes.18G045000 Manihot esculenta HOM05D004288 ORTHO05D004997 2.8e-13 79.0 113 45.1
Potri.014G017600 Populus trichocarpa HOM05D004288 ORTHO05D004997 2.8e-13 79.0 115 45.2
TAR376G0993 Trochodendron aralioides HOM05D004288 ORTHO05D004997 4.8e-13 78.2 119 43.7
Thecc.08G091000 Theobroma cacao HOM05D004288 ORTHO05D004997 2.4e-12 75.9 116 41.4
CANSAT25G2350 Cannabis sativa HOM05D004288 ORTHO05D004997 3.1e-12 75.5 119 40.3
Rhsim06G0060800 Rhododendron simsii HOM05D004288 ORTHO05D004997 4.0e-12 75.1 109 41.3
Lalb_Chr23g0267451 Lupinus albus HOM05D004288 ORTHO05D004997 5.3e-12 74.7 117 42.7
Dinv44970 Davidia involucrata HOM05D004288 ORTHO05D004997 6.9e-12 74.3 117 41.0
VMungo0647G1883 Vigna mungo HOM05D004288 ORTHO05D004997 9.0e-12 73.9 122 45.9
Ciclev10002881m.g Citrus clementina HOM05D004288 ORTHO05D004997 1.2e-11 73.6 118 44.1
Prupe.1G424700 Prunus persica HOM05D004288 ORTHO05D004997 1.2e-11 73.6 118 42.4
GSVIVG01009362001 Vitis vinifera HOM05D004288 ORTHO05D004997 1.2e-11 73.6 120 43.3
Dinv39247 Davidia involucrata HOM05D004288 ORTHO05D004997 3.4e-11 72.0 118 43.2
TWI12G0116 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 4.5e-11 71.6 120 40.8
VMungo0647G1736 Vigna mungo HOM05D004288 ORTHO05D004997 4.5e-11 71.6 148 39.9
Duzib116G0008 Durio zibethinus HOM05D004288 ORTHO05D004997 1.3e-10 70.1 117 41.9
Lalb_Chr11g0062841 Lupinus albus HOM05D004288 ORTHO05D004997 2.9e-10 68.9 120 40.8
MD08G1087000 Malus domestica HOM05D004288 ORTHO05D004997 2.9e-10 68.9 120 42.5
Atru.chr13.813 Acer truncatum HOM05D004288 ORTHO05D004997 3.8e-10 68.6 119 43.7
vmacro21447 Vaccinium macrocarpon HOM05D004288 ORTHO05D004997 4.9e-10 68.2 109 40.4
Oeu057368.1 Olea europaea HOM05D004288 ORTHO05D004997 8.4e-10 67.4 120 43.3
Actinidia10187 Actinidia chinensis HOM05D004288 ORTHO05D004997 2.4e-09 65.9 108 39.8
CiPaw.13G085100 Carya illinoinensis HOM05D004288 ORTHO05D004997 2.4e-09 65.9 78 48.7
Sabra14G0011500 Salix brachista HOM05D004288 ORTHO05D004997 2.4e-09 65.9 139 37.4
Duzib041G0778 Durio zibethinus HOM05D004288 ORTHO05D004997 3.2e-09 65.5 116 38.8
TWI56G0562 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 4.2e-09 65.1 115 39.1
Cc10_g05620 Coffea canephora HOM05D004288 ORTHO05D004997 7.1e-09 64.3 113 44.2
MD15G1071700 Malus domestica HOM05D004288 ORTHO05D004997 7.1e-09 64.3 116 39.7
CiPaw.08G113500 Carya illinoinensis HOM05D004288 ORTHO05D004997 9.3e-09 63.9 78 46.2
TAR628G0045 Trochodendron aralioides HOM05D004288 ORTHO05D004997 9.3e-09 63.9 120 41.7
CiPaw.04G152800 Carya illinoinensis HOM05D004288 ORTHO05D004997 1.6e-08 63.2 68 51.5
Gohir.A05G208400 Gossypium hirsutum HOM05D004288 ORTHO05D004997 1.6e-08 63.2 119 38.7
Actinidia22683 Actinidia chinensis HOM05D004288 ORTHO05D004997 2.1e-08 62.8 109 38.5
Cpa.g.sc21.102 Carica papaya HOM05D004288 ORTHO05D004997 2.1e-08 62.8 114 41.2
Gohir.A06G023200 Gossypium hirsutum HOM05D004288 ORTHO05D004997 2.1e-08 62.8 122 41.8
Gohir.D05G211900 Gossypium hirsutum HOM05D004288 ORTHO05D004997 3.5e-08 62.0 117 38.5
Gorai.009G218500 Gossypium raimondii HOM05D004288 ORTHO05D004997 3.5e-08 62.0 117 38.5
Nitab4.5_0000569g0070 Nicotiana tabacum HOM05D004288 ORTHO05D004997 3.5e-08 62.0 113 40.7
Gorai.010G024900 Gossypium raimondii HOM05D004288 ORTHO05D004997 6.0e-08 61.2 119 40.3
Hma1.2p1_0819F.1_g223820 Hydrangea macrophylla HOM05D004288 ORTHO05D004997 7.9e-08 60.8 110 38.2
Gohir.D06G020400 Gossypium hirsutum HOM05D004288 ORTHO05D004997 1.3e-07 60.1 123 43.1
PGSC0003DMG400021529 Solanum tuberosum HOM05D004288 ORTHO05D004997 1.8e-07 59.7 78 48.7
Actinidia38098 Actinidia chinensis HOM05D004288 ORTHO05D004997 2.3e-07 59.3 110 40.0
Aqoxy6G02704 Aquilegia oxysepala HOM05D004288 ORTHO05D004997 2.3e-07 59.3 69 44.9
CSS0041913 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 2.3e-07 59.3 110 38.2
TPR.G3776 Trifolium pratense HOM05D004288 ORTHO05D004997 3.0e-07 58.9 86 45.3
Hma1.2p1_0210F.1_g089620 Hydrangea macrophylla HOM05D004288 ORTHO05D004997 3.9e-07 58.5 76 47.4
Sed0005367 Sechium edule HOM05D004288 ORTHO05D004997 1.1e-06 57.0 68 44.1
Nn1g04602 Nelumbo nucifera HOM05D004288 ORTHO05D004997 1.5e-06 56.6 117 35.0
Sopen12g030390 Solanum pennellii HOM05D004288 ORTHO05D004997 1.5e-06 56.6 68 44.1
ECA232G2356 Erigeron canadensis HOM05D004288 ORTHO05D004997 1.9e-06 56.2 113 38.1
SalBow6G1935 Salvia bowleyana HOM05D004288 ORTHO05D004997 1.9e-06 56.2 113 33.6
SalBow8G0960 Salvia bowleyana HOM05D004288 ORTHO05D004997 1.9e-06 56.2 113 33.6
Solyc12g088410.3 Solanum lycopersicum HOM05D004288 ORTHO05D004997 3.3e-06 55.5 68 42.6
MSTRG.1030 Avicennia marina HOM05D004288 ORTHO05D004997 4.3e-06 55.1 115 38.3
AUR62024063 Chenopodium quinoa HOM05D004288 ORTHO05D004997 4.3e-06 55.1 70 44.3
HanXRQChr09g0266571 Helianthus annuus HOM05D004288 ORTHO05D004997 4.3e-06 55.1 114 37.7
PGSC0003DMG401011559 Solanum tuberosum HOM05D004288 ORTHO05D004997 4.3e-06 55.1 65 44.6
CsaV3_4G034910 Cucumis sativus L. HOM05D004288 ORTHO05D003449 5.6e-06 54.7 78 37.2
Nitab4.5_0011511g0010 Nicotiana tabacum HOM05D004288 ORTHO05D004997 5.6e-06 54.7 119 38.7
Peaxi162Scf00160g00120 Petunia axillaris HOM05D004288 ORTHO05D004997 5.6e-06 54.7 69 43.5
QL12p037641 Quercus lobata HOM05D004288 ORTHO05D004997 7.4e-06 54.3 137 33.6
Migut.C00495 Erythranthe guttata HOM05D004288 ORTHO05D004997 9.6e-06 53.9 115 37.4
THA.LOC104825767 Tarenaya hassleriana HOM05D004288 ORTHO05D004997 9.6e-06 53.9 74 44.6


User provided reference genes

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