Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 5.5e-160 567.8 329 100.0
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 5.2e-142 508.1 325 91.1
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 7.5e-141 504.2 325 91.1
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 2.2e-140 502.7 328 90.2
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 1.4e-139 500.0 328 89.6
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 3.2e-139 498.8 328 89.3
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 3.2e-139 498.8 325 88.6
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 5.4e-139 498.0 326 73.3
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 9.2e-139 497.3 328 87.8
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 3.5e-138 495.4 328 73.8
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 1.0e-137 493.8 328 73.5
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 1.3e-137 493.4 328 85.7
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 1.7e-137 493.0 328 73.2
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 5.0e-137 491.5 328 72.9
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 1.1e-136 490.3 328 86.6
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 1.9e-136 489.6 328 84.1
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 2.5e-136 489.2 326 86.8
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 5.6e-136 488.0 326 86.5
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 7.3e-136 487.6 328 85.4
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 1.2e-135 486.9 329 71.4
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 2.1e-135 486.1 326 86.5
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 2.1e-135 486.1 328 71.0
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 2.8e-135 485.7 324 86.4
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 3.6e-135 485.3 326 85.0
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 1.8e-134 483.0 328 74.7
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 2.3e-134 482.6 328 85.1
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 2.3e-134 482.6 326 70.2
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 2.3e-134 482.6 328 84.5
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 1.2e-133 480.3 324 74.4
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 2.6e-133 479.2 328 85.1
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 9.8e-133 477.2 324 82.7
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 2.2e-132 476.1 328 84.5
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 2.2e-132 476.1 324 72.2
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 1.1e-131 473.8 323 81.7
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 1.9e-131 473.0 325 82.8
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 4.1e-131 471.9 323 84.2
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 5.4e-131 471.5 323 84.5
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 9.2e-131 470.7 326 83.4
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 9.2e-131 470.7 328 83.8
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 1.2e-130 470.3 328 72.0
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 1.2e-130 470.3 326 77.3
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.6e-130 469.9 328 76.8
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 2.0e-130 469.5 321 84.7
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 2.7e-130 469.2 325 84.9
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 2.7e-130 469.2 326 82.8
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 4.6e-130 468.4 328 83.2
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 6.0e-130 468.0 323 68.7
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 7.8e-130 467.6 328 83.2
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 7.8e-130 467.6 323 83.3
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 1.0e-129 467.2 326 84.0
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 1.3e-129 466.8 326 81.9
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 1.3e-129 466.8 326 69.3
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 1.3e-129 466.8 328 83.5
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 1.7e-129 466.5 323 83.9
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 2.3e-129 466.1 323 84.8
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 2.3e-129 466.1 327 69.4
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 2.3e-129 466.1 327 82.9
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 3.0e-129 465.7 323 68.7
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 5.0e-129 464.9 328 67.4
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 5.0e-129 464.9 326 67.5
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 1.9e-128 463.0 326 83.1
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 1.2e-127 460.3 323 83.9
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 6.2e-127 458.0 327 81.0
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 1.1e-126 457.2 328 80.5
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 3.1e-126 455.7 325 68.3
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 4.0e-126 455.3 326 81.3
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 4.0e-126 455.3 323 67.5
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 5.2e-126 454.9 328 81.7
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 5.2e-126 454.9 328 66.8
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 6.8e-126 454.5 328 66.5
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 3.4e-125 452.2 328 66.5
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 1.4e-123 446.8 324 66.0
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 4.1e-123 445.3 235 85.1
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 5.4e-123 444.9 323 79.9
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 9.2e-123 444.1 235 84.7
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 2.1e-122 443.0 324 73.5
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 1.3e-121 440.3 372 59.4
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 1.1e-120 437.2 235 86.0
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 1.9e-120 436.4 330 77.6
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 2.1e-119 433.0 327 67.9
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 3.6e-119 432.2 235 82.6
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 8.1e-119 431.0 331 77.0
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 1.1e-118 430.6 327 77.1
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 4.4e-117 425.2 327 61.8
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 2.9e-116 422.5 327 61.8
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 4.9e-116 421.8 327 61.2
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 6.4e-116 421.4 327 61.2
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 6.4e-116 421.4 320 64.1
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 1.1e-115 420.6 327 60.9
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 2.3e-113 412.9 323 76.5
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 8.7e-113 411.0 324 63.0
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 8.1e-111 404.4 321 61.7
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 3.2e-107 392.5 312 75.0
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 4.2e-107 392.1 236 74.6
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 6.0e-106 388.3 334 59.0
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 2.5e-104 382.9 326 72.7
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 2.7e-98 362.8 321 70.1
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 7.9e-98 361.3 324 54.0
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 3.0e-97 359.4 264 85.2
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 7.4e-96 354.8 321 67.9
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 1.6e-95 353.6 265 65.3
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 3.8e-92 342.4 279 79.9
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 1.4e-91 340.5 269 79.9
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 1.3e-84 317.4 251 63.3
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 6.0e-82 308.5 251 81.7
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 5.0e-76 288.9 248 76.6
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 7.4e-72 275.0 379 39.1
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 1.2e-66 257.7 249 69.9
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 1.5e-64 250.8 191 66.0
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 1.2e-61 241.1 229 52.8
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 1.5e-61 240.7 331 45.9
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 4.2e-59 232.6 140 77.9
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 7.2e-59 231.9 189 58.2
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 2.5e-51 206.8 128 75.0
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 5.5e-51 205.7 124 72.6
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 3.2e-43 179.9 94 84.0
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 3.3e-19 100.1 87 60.9
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 1.1e-17 95.1 85 52.9
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 2.6e-08 63.9 55 61.8
GSVIVG01038121001 Vitis vinifera HOM05D006600 ORTHO05D008446 9.9e-08 62.0 41 68.3
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 8.3e-07 58.9 156 28.8
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 3.2e-06 57.0 36 63.9


User provided reference genes

Program Settings