Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0008264 Lotus japonicus HOM05D013113 ORTHO05D000007 1.7e-224 782.3 391 100.0
Lj6g0007788 Lotus japonicus HOM05D021482 ORTHO05D000007 5.6e-42 176.0 357 35.6
Lj3g0015936 Lotus japonicus HOM05D000003 ORTHO05D000007 6.2e-41 172.6 207 45.4
Lj3g0023340 Lotus japonicus HOM05D000003 ORTHO05D000007 3.1e-40 170.2 184 51.6
Lj4g0026510 Lotus japonicus HOM05D000003 ORTHO05D000007 3.1e-40 170.2 184 51.6
Lj6g0024060 Lotus japonicus HOM05D021482 ORTHO05D000007 5.2e-40 169.5 193 47.2
LjContig00141g0004084 Lotus japonicus HOM05D013113 ORTHO05D000007 2.6e-39 167.2 187 49.2
Lj5g0007677 Lotus japonicus HOM05D013113 ORTHO05D000007 1.0e-35 155.2 412 30.3
Lj1g0011927 Lotus japonicus HOM05D013113 ORTHO05D000007 1.1e-34 151.8 188 43.1
Lj4g0016016 Lotus japonicus HOM05D000003 ORTHO05D000007 3.3e-34 150.2 181 42.5
Lj5g0023154 Lotus japonicus HOM05D013113 ORTHO05D000007 5.4e-29 132.9 374 31.3
Lj1g0003324 Lotus japonicus HOM05D013113 ORTHO05D000007 7.1e-29 132.5 374 31.0
Lj6g0012945 Lotus japonicus HOM05D013113 ORTHO05D000007 6.0e-28 129.4 213 39.0
Lj4g0004327 Lotus japonicus HOM05D021482 ORTHO05D000007 3.9e-27 126.7 307 32.6
Lj4g0024417 Lotus japonicus HOM05D013113 ORTHO05D000007 1.4e-24 118.2 144 45.1
Lj2g0018548 Lotus japonicus HOM05D013113 ORTHO05D000007 4.0e-24 116.7 361 29.1
Lj3g0002364 Lotus japonicus HOM05D000003 ORTHO05D000007 9.9e-23 112.1 168 39.3
Lj6g0020434 Lotus japonicus HOM05D013113 ORTHO05D000007 1.3e-22 111.7 187 38.0
Lj1g0009754 Lotus japonicus HOM05D013113 ORTHO05D000007 1.7e-22 111.3 254 35.4
Lj6g0022957 Lotus japonicus HOM05D000003 ORTHO05D000007 1.1e-18 98.6 191 36.1
Lj2g0006651 Lotus japonicus HOM05D000003 ORTHO05D000007 3.2e-13 80.5 168 32.7
TPR.G14601 Trifolium pratense HOM05D000003 ORTHO05D000007 2.1e-12 77.8 132 31.8
Lj2g0027528 Lotus japonicus HOM05D000003 ORTHO05D000007 4.6e-12 76.6 144 35.4
Lj3g0021686 Lotus japonicus HOM05D000003 ORTHO05D000007 4.6e-12 76.6 145 33.8
LjContig00141g0023727 Lotus japonicus HOM05D013113 ORTHO05D000007 7.8e-12 75.9 191 33.0
Lj6g0020901 Lotus japonicus HOM05D000003 ORTHO05D000007 1.0e-11 75.5 133 33.1
Lj2g0018026 Lotus japonicus HOM05D000003 ORTHO05D000007 1.3e-11 75.1 145 34.5
Lj2g0021603 Lotus japonicus HOM05D000003 ORTHO05D000007 3.9e-11 73.6 187 29.9
Lj6g0012583 Lotus japonicus HOM05D000003 ORTHO05D000007 3.9e-11 73.6 111 40.5
LjContig00503g0020544 Lotus japonicus HOM05D000003 ORTHO05D000007 3.9e-11 73.6 181 32.6
Lj3g0024062 Lotus japonicus HOM05D000003 ORTHO05D000007 6.6e-11 72.8 133 35.3
TPR.G11139 Trifolium pratense HOM05D000003 ORTHO05D000007 6.6e-11 72.8 133 30.1
Lj1g0021200 Lotus japonicus HOM05D000003 ORTHO05D000007 1.1e-10 72.0 112 32.1
Lj3g0024630 Lotus japonicus HOM05D000003 ORTHO05D000007 1.1e-10 72.0 115 35.7
Lj5g0009009 Lotus japonicus HOM05D000003 ORTHO05D000007 1.1e-10 72.0 100 39.0
Lj4g0008475 Lotus japonicus HOM05D000003 ORTHO05D000007 1.5e-10 71.6 134 34.3
TPR.G511 Trifolium pratense HOM05D000003 ORTHO05D000007 1.5e-10 71.6 185 29.2
Lj2g0007178 Lotus japonicus HOM05D000003 ORTHO05D000007 3.3e-10 70.5 104 42.3
TWI81G0242 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.3e-10 70.1 191 26.7
Lj6g0003171 Lotus japonicus HOM05D000003 ORTHO05D000007 7.3e-10 69.3 137 32.1
Lj1g0012109 Lotus japonicus HOM05D000003 ORTHO05D000007 9.6e-10 68.9 106 38.7
EL10Ac8g19679 Beta vulgaris HOM05D000003 ORTHO05D000007 1.3e-09 68.6 184 30.4
TPR.G29549 Trifolium pratense HOM05D000003 ORTHO05D000007 1.6e-09 68.2 178 31.5
COL.COLO4_11918 Corchorus olitorius HOM05D000003 ORTHO05D000007 2.1e-09 67.8 113 34.5
Medtr3g026903 Medicago truncatula HOM05D000003 ORTHO05D000007 2.8e-09 67.4 114 31.6
COL.COLO4_05807 Corchorus olitorius HOM05D000003 ORTHO05D000006 3.6e-09 67.0 156 31.4
Lj1g0010773 Lotus japonicus HOM05D000003 ORTHO05D000007 3.6e-09 67.0 183 27.9
TPR.G16044 Trifolium pratense HOM05D000003 ORTHO05D000007 4.8e-09 66.6 137 33.6
TPR.G39739 Trifolium pratense HOM05D000003 ORTHO05D000007 4.8e-09 66.6 192 29.7
THA.LOC104799464 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 6.2e-09 66.2 136 30.1
Lj3g0003480 Lotus japonicus HOM05D000003 ORTHO05D000007 8.1e-09 65.9 139 33.1
Lj3g0011245 Lotus japonicus HOM05D000003 ORTHO05D000007 8.1e-09 65.9 202 27.7
TPR.G29398 Trifolium pratense HOM05D000003 ORTHO05D000007 8.1e-09 65.9 140 27.9
Prupe.2G044900 Prunus persica HOM05D000003 ORTHO05D000007 1.4e-08 65.1 73 42.5
Prupe.4G246900 Prunus persica HOM05D000003 ORTHO05D000007 1.4e-08 65.1 134 29.9
EL10Ac4g10100 Beta vulgaris HOM05D000003 ORTHO05D000007 2.4e-08 64.3 183 32.2
Lj6g0027241 Lotus japonicus HOM05D000473 ORTHO05D000007 2.4e-08 64.3 164 28.7
Lj2g0019281 Lotus japonicus HOM05D000003 ORTHO05D000007 4.0e-08 63.5 121 28.9
TPR.G29860 Trifolium pratense HOM05D004401 ORTHO05D005169 4.0e-08 63.5 145 26.2
Lj4g0014676 Lotus japonicus HOM05D000003 ORTHO05D000007 5.3e-08 63.2 60 40.0
EL10Ac2g03868 Beta vulgaris HOM05D000003 ORTHO05D000007 6.9e-08 62.8 183 32.2
Psat5g074520 Pisum sativum HOM05D000003 ORTHO05D000007 6.9e-08 62.8 70 44.3
FvH4_3g33091 Fragaria vesca HOM05D000003 ORTHO05D000022 9.0e-08 62.4 81 37.0
Lj3g0003086 Lotus japonicus HOM05D000003 ORTHO05D000006 9.0e-08 62.4 189 29.6
Lj4g0003656 Lotus japonicus HOM05D000003 ORTHO05D000007 9.0e-08 62.4 197 25.9
Lj4g0010109 Lotus japonicus HOM05D000003 ORTHO05D000007 9.0e-08 62.4 181 27.6
Lj4g0024296 Lotus japonicus HOM05D000003 ORTHO05D000007 9.0e-08 62.4 189 29.6
TPR.G23335 Trifolium pratense HOM05D000003 ORTHO05D000007 9.0e-08 62.4 143 29.4
TPR.G24275 Trifolium pratense HOM05D000003 ORTHO05D000007 9.0e-08 62.4 136 30.9
TPR.G39703 Trifolium pratense HOM05D000003 ORTHO05D000007 9.0e-08 62.4 137 32.1
Lj6g0024012 Lotus japonicus HOM05D000003 ORTHO05D000007 1.2e-07 62.0 91 33.0
Prupe.1G179200 Prunus persica HOM05D000003 ORTHO05D000007 1.2e-07 62.0 137 29.2
EL10Ac5g10755 Beta vulgaris HOM05D000003 ORTHO05D000007 1.5e-07 61.6 193 26.9
Lj3g0019048 Lotus japonicus HOM05D000003 ORTHO05D000007 1.5e-07 61.6 145 29.7
Lj6g0007219 Lotus japonicus HOM05D000003 ORTHO05D000007 1.5e-07 61.6 81 37.0
Aa31sc194G20 Aethionema arabicum HOM05D000003 ORTHO05D000007 2.0e-07 61.2 128 32.0
Manes.07G103102 Manihot esculenta HOM05D000003 ORTHO05D000004 2.0e-07 61.2 197 26.4
Lj1g0013586 Lotus japonicus HOM05D000003 ORTHO05D000007 2.6e-07 60.8 177 29.9
PGR004G0997 Punica granatum HOM05D000003 ORTHO05D000007 2.6e-07 60.8 84 33.3
TPR.G4588 Trifolium pratense HOM05D061595 ORTHO05D000007 2.6e-07 60.8 132 28.0
Lj1g0024982 Lotus japonicus HOM05D000003 ORTHO05D000007 3.4e-07 60.5 192 28.6
TPR.G17627 Trifolium pratense HOM05D000003 ORTHO05D000007 3.4e-07 60.5 80 30.0
TPR.G32099 Trifolium pratense HOM05D000003 ORTHO05D000007 3.4e-07 60.5 130 30.8
QL12p006495 Quercus lobata HOM05D000003 ORTHO05D000007 4.5e-07 60.1 178 28.7
TPR.G23327 Trifolium pratense HOM05D000737 ORTHO05D000581 4.5e-07 60.1 131 28.2
Prupe.2G199900 Prunus persica HOM05D000003 ORTHO05D000007 7.6e-07 59.3 136 27.2
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 7.6e-07 59.3 220 28.2
QL04p067563 Quercus lobata HOM05D000003 ORTHO05D000007 7.6e-07 59.3 187 27.3
TPR.G28232 Trifolium pratense HOM05D000003 ORTHO05D000007 7.6e-07 59.3 131 29.0
TWI56G1353 Tripterygium wilfordii HOM05D000003 ORTHO05D000007 7.6e-07 59.3 137 27.7
QL11p054864 Quercus lobata HOM05D000003 ORTHO05D000007 9.9e-07 58.9 181 27.6
TPR.G14379 Trifolium pratense HOM05D000003 ORTHO05D000007 9.9e-07 58.9 136 28.7
Prupe.7G019600 Prunus persica HOM05D000003 ORTHO05D000007 1.3e-06 58.5 132 25.0
TPR.G22431 Trifolium pratense HOM05D000003 ORTHO05D000007 1.3e-06 58.5 131 27.5
TPR.G24718 Trifolium pratense HOM05D000003 ORTHO05D000007 1.3e-06 58.5 147 27.2
CSS0029354 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-06 58.2 183 26.2
Sabra04G0049100 Salix brachista HOM05D000003 ORTHO05D000007 1.7e-06 58.2 67 35.8
Lj5g0001706 Lotus japonicus HOM05D000003 ORTHO05D000007 2.9e-06 57.4 76 36.8
Lj5g0003428 Lotus japonicus HOM05D000003 ORTHO05D000007 2.9e-06 57.4 86 32.6
TPR.G35802 Trifolium pratense HOM05D000003 ORTHO05D000007 2.9e-06 57.4 144 29.9
TPR.G6390 Trifolium pratense HOM05D001015 ORTHO05D000007 2.9e-06 57.4 59 40.7
Lj1g0004894 Lotus japonicus HOM05D000003 ORTHO05D000007 3.8e-06 57.0 144 29.2
Medtr1g054775 Medicago truncatula HOM05D000003 ORTHO05D000004 3.8e-06 57.0 135 29.6
Peaxi162Scf00464g00213 Petunia axillaris HOM05D000003 ORTHO05D000007 3.8e-06 57.0 113 27.4
COL.COLO4_12291 Corchorus olitorius HOM05D000003 ORTHO05D000007 4.9e-06 56.6 186 26.3
Lj3g0016538 Lotus japonicus HOM05D000327 ORTHO05D000218 4.9e-06 56.6 143 28.7
QL04p091860 Quercus lobata HOM05D000003 ORTHO05D044761 4.9e-06 56.6 177 26.0
Sabra08G0135000 Salix brachista HOM05D000003 ORTHO05D000007 4.9e-06 56.6 65 36.9
EL10Ac6g13602 Beta vulgaris HOM05D000003 ORTHO05D000007 6.4e-06 56.2 85 30.6
Lj2g0027255 Lotus japonicus HOM05D000003 ORTHO05D000007 6.4e-06 56.2 198 27.3
Lj5g0016382 Lotus japonicus HOM05D000003 ORTHO05D000007 6.4e-06 56.2 86 32.6
QL02p080468 Quercus lobata HOM05D000003 ORTHO05D000007 6.4e-06 56.2 177 26.6
Sabra15G0066100 Salix brachista HOM05D000003 ORTHO05D000007 6.4e-06 56.2 54 35.2
TPR.G18288 Trifolium pratense HOM05D000003 ORTHO05D000006 6.4e-06 56.2 135 28.1
EL10Ac3g06843 Beta vulgaris HOM05D000003 ORTHO05D000007 8.4e-06 55.8 190 24.2
Psat5g195440 Pisum sativum HOM05D012017 ORTHO05D000007 8.4e-06 55.8 81 34.6


User provided reference genes

Program Settings