Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 4.5e-52 207.6 103 100.0
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 2.8e-41 171.8 97 86.6
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 6.2e-41 170.6 97 85.6
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 4.0e-40 167.9 100 80.0
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 5.2e-40 167.5 100 80.0
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 8.9e-40 166.8 97 83.5
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 1.9e-37 159.1 96 82.3
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 1.9e-37 159.1 98 80.6
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 7.0e-37 157.1 95 76.8
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 9.2e-37 156.8 96 79.2
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 1.2e-36 156.4 94 80.9
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 1.2e-36 156.4 94 84.0
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 3.5e-36 154.8 99 78.8
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 6.0e-36 154.1 99 75.8
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 6.0e-36 154.1 94 79.8
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 7.8e-36 153.7 91 81.3
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 1.0e-35 153.3 95 78.9
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 1.0e-35 153.3 96 81.2
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.7e-35 152.5 94 78.7
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 2.3e-35 152.1 95 78.9
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 3.0e-35 151.8 94 78.7
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 3.9e-35 151.4 95 75.8
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 1.1e-34 149.8 97 75.3
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 1.5e-34 149.4 98 72.4
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 1.5e-34 149.4 96 77.1
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 1.9e-34 149.1 89 82.0
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 1.9e-34 149.1 96 74.0
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 1.9e-34 149.1 100 76.0
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 1.9e-34 149.1 98 74.5
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 4.3e-34 147.9 96 75.0
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 4.3e-34 147.9 98 74.5
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 5.6e-34 147.5 101 77.2
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 5.6e-34 147.5 92 75.0
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 7.3e-34 147.1 96 78.1
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 9.5e-34 146.7 96 75.0
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 9.5e-34 146.7 97 75.3
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 1.2e-33 146.4 95 75.8
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 1.2e-33 146.4 95 73.7
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.2e-33 146.4 95 73.7
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.2e-33 146.4 95 73.7
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 1.6e-33 146.0 97 72.2
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 1.6e-33 146.0 95 73.7
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 2.8e-33 145.2 95 73.7
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 2.8e-33 145.2 97 73.2
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 4.7e-33 144.4 97 72.2
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 6.2e-33 144.1 94 75.5
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 6.2e-33 144.1 96 75.0
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 8.1e-33 143.7 97 76.3
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.1e-32 143.3 95 72.6
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 1.4e-32 142.9 95 73.7
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 1.4e-32 142.9 95 73.7
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 2.3e-32 142.1 95 67.4
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 4.0e-32 141.4 97 72.2
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 4.0e-32 141.4 97 72.2
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 4.0e-32 141.4 97 72.2
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 5.2e-32 141.0 95 73.7
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 5.2e-32 141.0 97 71.1
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 6.8e-32 140.6 95 72.6
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 6.8e-32 140.6 97 71.1
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 6.8e-32 140.6 96 71.9
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 8.9e-32 140.2 97 72.2
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 8.9e-32 140.2 104 70.2
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 1.2e-31 139.8 97 71.1
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 1.2e-31 139.8 97 71.1
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 1.5e-31 139.4 97 71.1
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 1.5e-31 139.4 95 72.6
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 4.4e-31 137.9 97 71.1
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 5.8e-31 137.5 99 69.7
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 7.5e-31 137.1 93 72.0
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 9.9e-31 136.7 96 70.8
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 1.7e-30 136.0 97 69.1
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 1.7e-30 136.0 95 71.6
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 2.2e-30 135.6 97 70.1
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 2.2e-30 135.6 90 72.2
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 2.9e-30 135.2 97 68.0
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 2.9e-30 135.2 84 81.0
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 6.4e-30 134.0 96 70.8
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 6.4e-30 134.0 96 68.8
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 6.4e-30 134.0 96 68.8
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 6.4e-30 134.0 96 68.8
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 6.4e-30 134.0 96 68.8
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 6.4e-30 134.0 122 61.5
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 1.4e-29 132.9 96 67.7
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 1.4e-29 132.9 99 67.7
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 1.4e-29 132.9 81 75.3
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 1.9e-29 132.5 80 80.0
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 2.4e-29 132.1 101 66.3
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 7.1e-29 130.6 94 67.0
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 1.6e-28 129.4 93 67.7
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 3.5e-28 128.3 89 68.5
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 4.6e-28 127.9 96 70.8
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 6.0e-28 127.5 89 68.5
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 7.8e-28 127.1 89 68.5
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 7.8e-28 127.1 101 63.4
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 1.3e-27 126.3 89 68.5
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 1.3e-27 126.3 89 68.5
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 2.3e-27 125.6 89 67.4
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 1.1e-26 123.2 81 72.8
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 1.9e-26 122.5 84 72.6
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 2.5e-26 122.1 101 67.3
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 2.5e-26 122.1 83 69.9
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 7.3e-26 120.6 92 64.1
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 8.1e-25 117.1 80 71.2
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 3.8e-22 108.2 80 67.5
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 4.9e-22 107.8 64 81.2
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 6.4e-22 107.5 98 61.2
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 2.5e-18 95.5 71 66.2
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 4.3e-18 94.7 90 58.9
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 7.3e-18 94.0 81 54.3
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 6.9e-16 87.4 88 50.0
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 1.4e-13 79.7 95 46.3
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 2.4e-13 79.0 81 53.1
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 7.8e-12 73.9 50 70.0
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 1.3e-11 73.2 112 43.8
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 5.1e-11 71.2 45 66.7
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 5.6e-10 67.8 67 53.7
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 1.6e-09 66.2 38 78.9
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.8e-09 65.5 38 71.1
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 9.9e-07 57.0 43 55.8


User provided reference genes

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