Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0007298 Lotus japonicus HOM05D005113 ORTHO05D006045 3.2e-72 275.0 141 100.0
Lalb_Chr20g0111221 Lupinus albus HOM05D005113 ORTHO05D006045 5.6e-45 184.5 140 70.0
Glyma.19G202000 Glycine max HOM05D005113 ORTHO05D006045 1.2e-42 176.8 141 68.8
Psat3g027480 Pisum sativum HOM05D005113 ORTHO05D006045 5.5e-40 167.9 141 65.2
Medtr7g106840 Medicago truncatula HOM05D005113 ORTHO05D006045 7.1e-40 167.5 140 65.7
TPR.G34441 Trifolium pratense HOM05D005113 ORTHO05D006045 1.3e-38 163.3 133 68.4
Lalb_Chr25g0287851 Lupinus albus HOM05D005113 ORTHO05D006045 1.6e-36 156.4 139 60.4
arahy.Tifrunner.gnm1.ann1.7K7EQP Arachis hypogaea HOM05D005113 ORTHO05D006045 1.1e-35 153.7 131 64.1
Phvul.001G198200 Phaseolus vulgaris HOM05D005113 ORTHO05D006045 4.1e-35 151.8 142 59.2
arahy.Tifrunner.gnm1.ann1.TS08QV Arachis hypogaea HOM05D005113 ORTHO05D006045 1.7e-33 146.4 131 64.9
Glyma.03G204600 Glycine max HOM05D005113 ORTHO05D006045 4.6e-23 111.7 133 52.6
Glyma.10G086500 Glycine max HOM05D005113 ORTHO05D006045 8.8e-22 107.5 140 49.3
Glyma.02G187500 Glycine max HOM05D005113 ORTHO05D006045 2.6e-21 105.9 140 47.9
FAN09G1514 Fragaria x ananassa HOM05D005113 ORTHO05D006045 4.1e-19 98.6 142 45.1
FAN05G0955 Fragaria x ananassa HOM05D005113 ORTHO05D006045 6.9e-19 97.8 142 44.4
FAN05G3212 Fragaria x ananassa HOM05D005113 ORTHO05D006045 6.9e-19 97.8 142 44.4
FvH4_6g20940 Fragaria vesca HOM05D005113 ORTHO05D006045 9.1e-19 97.4 142 44.4
FAN14G1795 Fragaria x ananassa HOM05D005113 ORTHO05D006045 9.1e-19 97.4 142 44.4
RcHm_v2.0_Chr3g0477281 Rosa chinensis HOM05D005113 ORTHO05D006045 9.1e-19 97.4 142 45.1
MD12G1045200 Malus domestica HOM05D005113 ORTHO05D006045 1.7e-17 93.2 138 42.8
MD14G1044100 Malus domestica HOM05D005113 ORTHO05D006045 1.7e-17 93.2 138 43.5
VMungo1383G0003 Vigna mungo HOM05D005113 ORTHO05D006045 1.7e-17 93.2 141 45.4
FAN02G2823 Fragaria x ananassa HOM05D005113 ORTHO05D006045 2.2e-17 92.8 143 43.4
Dinv25078 Davidia involucrata HOM05D005113 ORTHO05D006045 2.9e-17 92.4 137 46.0
arahy.Tifrunner.gnm1.ann1.I8YMJK Arachis hypogaea HOM05D005113 ORTHO05D006045 5.0e-17 91.7 136 49.3
Phvul.007G265600 Phaseolus vulgaris HOM05D005113 ORTHO05D006045 5.0e-17 91.7 139 45.3
Thecc.05G109700 Theobroma cacao HOM05D005113 ORTHO05D006045 3.2e-16 89.0 135 42.2
Manes.08G036800 Manihot esculenta HOM05D005113 ORTHO05D006045 4.2e-16 88.6 135 41.5
VMungo0720G0986 Vigna mungo HOM05D005113 ORTHO05D006045 5.5e-16 88.2 135 43.0
Actinidia06192 Actinidia chinensis HOM05D005113 ORTHO05D006045 9.4e-16 87.4 136 44.1
Actinidia07952 Actinidia chinensis HOM05D005113 ORTHO05D006045 9.4e-16 87.4 135 44.4
QL07p026499 Quercus lobata HOM05D005113 ORTHO05D006045 2.1e-15 86.3 111 46.8
Dinv11892 Davidia involucrata HOM05D005113 ORTHO05D006045 2.7e-15 85.9 139 44.6
Duzib106G0847 Durio zibethinus HOM05D005113 ORTHO05D006045 2.7e-15 85.9 132 43.2
Aqoxy1G00593 Aquilegia oxysepala HOM05D005113 ORTHO05D006045 3.6e-15 85.5 137 43.1
TAR633G2365 Trochodendron aralioides HOM05D005113 ORTHO05D006045 2.3e-14 82.8 137 38.7
Haze_07788 Corylus avellana HOM05D005113 ORTHO05D006045 8.8e-14 80.9 126 41.3
GSVIVG01022551001 Vitis vinifera HOM05D005113 ORTHO05D006045 1.1e-13 80.5 130 42.3
Cpa.g.sc222.18 Carica papaya HOM05D005113 ORTHO05D006045 1.5e-13 80.1 137 40.9
Atru.chr8.1293 Acer truncatum HOM05D005113 ORTHO05D006045 3.3e-13 79.0 135 38.5
Nn1g06541 Nelumbo nucifera HOM05D005113 ORTHO05D006045 5.7e-13 78.2 139 43.2
ECA238G1367 Erigeron canadensis HOM05D005113 ORTHO05D006045 9.7e-13 77.4 130 38.5
arahy.Tifrunner.gnm1.ann1.HSX17H Arachis hypogaea HOM05D005113 ORTHO05D006045 2.2e-12 76.3 136 42.6
CiPaw.09G023700 Carya illinoinensis HOM05D005113 ORTHO05D006045 2.2e-12 76.3 96 47.9
Gohir.D09G128500 Gossypium hirsutum HOM05D005113 ORTHO05D006045 2.2e-12 76.3 130 38.5
PSO384G2214 Papaver somniferum HOM05D005113 ORTHO05D006045 2.8e-12 75.9 139 41.0
Gohir.A11G315200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 3.7e-12 75.5 133 39.8
Prupe.7G090200 Prunus persica HOM05D005113 ORTHO05D006045 3.7e-12 75.5 121 46.3
Cfa019390 Carpinus fangiana HOM05D005113 ORTHO05D006045 4.8e-12 75.1 124 41.1
Rhsim04G0135100 Rhododendron simsii HOM05D005113 ORTHO05D006045 4.8e-12 75.1 138 40.6
CANSAT64G1258 Cannabis sativa HOM05D005113 ORTHO05D006045 6.3e-12 74.7 135 38.5
Haze_20118 Corylus avellana HOM05D005113 ORTHO05D006045 8.2e-12 74.3 127 41.7
Nn2g14410 Nelumbo nucifera HOM05D005113 ORTHO05D006045 1.1e-11 73.9 130 42.3
TWI74G1336 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 1.1e-11 73.9 133 39.1
DCAR_020680 Daucus carota HOM05D005113 ORTHO05D006045 1.8e-11 73.2 140 39.3
Gohir.D11G332200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 2.4e-11 72.8 131 38.9
Oeu020160.1 Olea europaea HOM05D005113 ORTHO05D006045 2.4e-11 72.8 138 38.4
PSO339G6075 Papaver somniferum HOM05D005113 ORTHO05D006045 2.4e-11 72.8 142 38.0
Gorai.006G147100 Gossypium raimondii HOM05D005113 ORTHO05D006045 3.1e-11 72.4 127 38.6
Migut.L01845 Erythranthe guttata HOM05D005113 ORTHO05D006045 4.1e-11 72.0 134 42.5
Oeu044708.1 Olea europaea HOM05D005113 ORTHO05D006045 7.0e-11 71.2 129 39.5
MBI11_g26202_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 9.1e-11 70.9 139 33.8
MBI11_g46321_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 9.1e-11 70.9 139 33.8
CSS0024187 Camellia sinensis var. sinensis HOM05D005113 ORTHO05D006045 1.2e-10 70.5 123 42.3
Solyc01g006760.3 Solanum lycopersicum HOM05D005113 ORTHO05D006045 1.2e-10 70.5 135 37.8
MSTRG.26588 Avicennia marina HOM05D005113 ORTHO05D006045 2.0e-10 69.7 136 39.7
Sabra16G0067600 Salix brachista HOM05D005113 ORTHO05D006045 2.0e-10 69.7 131 38.9
TWI53G1462 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 3.5e-10 68.9 139 39.6
Eucgr.A02548 Eucalyptus grandis HOM05D005113 ORTHO05D006045 4.5e-10 68.6 139 36.7
DCAR_009075 Daucus carota HOM05D000059 ORTHO05D012409 7.7e-10 67.8 138 38.4
Migut.J00732 Erythranthe guttata HOM05D005113 ORTHO05D006045 7.7e-10 67.8 135 38.5
Cc06_g06930 Coffea canephora HOM05D005113 ORTHO05D006045 1.0e-09 67.4 135 38.5
HanXRQChr07g0196541 Helianthus annuus HOM05D005113 ORTHO05D006045 1.7e-09 66.6 129 36.4
MBI05_g03323_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 1.7e-09 66.6 141 35.5
Lsat_1_v5_gn_2_101981 Lactuca sativa HOM05D005113 ORTHO05D006045 2.2e-09 66.2 131 36.6
Sopen01g002760 Solanum pennellii HOM05D005113 ORTHO05D006045 3.8e-09 65.5 133 36.1
PGSC0003DMG400021340 Solanum tuberosum HOM05D005113 ORTHO05D006045 3.8e-09 65.5 136 36.8
Peaxi162Scf00203g00418 Petunia axillaris HOM05D005113 ORTHO05D006045 5.0e-09 65.1 141 36.2
CiPaw.10G020600 Carya illinoinensis HOM05D005113 ORTHO05D006045 8.5e-09 64.3 83 49.4
Gorai.007G363100 Gossypium raimondii HOM05D005113 ORTHO05D006045 8.5e-09 64.3 80 51.2
Oeu045023.1 Olea europaea HOM05D005113 ORTHO05D006045 1.5e-08 63.5 126 39.7
Duzib093G2033 Durio zibethinus HOM05D005113 ORTHO05D006045 1.9e-08 63.2 99 41.4
Manes.09G042200 Manihot esculenta HOM05D005113 ORTHO05D006045 1.9e-08 63.2 129 37.2
Ciclev10013205m.g Citrus clementina HOM05D005113 ORTHO05D006045 4.2e-08 62.0 91 44.0
Potri.016G066200 Populus trichocarpa HOM05D005113 ORTHO05D006045 5.5e-08 61.6 83 45.8
Solyc10g081690.1 Solanum lycopersicum HOM05D005113 ORTHO05D006045 9.4e-08 60.8 135 32.6
PGR142G0458 Punica granatum HOM05D005113 ORTHO05D006045 1.2e-07 60.5 129 36.4
Sopen10g032200 Solanum pennellii HOM05D005113 ORTHO05D006045 1.2e-07 60.5 135 32.6
PGSC0003DMG400028226 Solanum tuberosum HOM05D009103 ORTHO05D010883 2.1e-07 59.7 137 32.1
TAR623G1290 Trochodendron aralioides HOM05D005113 ORTHO05D006045 2.1e-07 59.7 98 41.8
Medtr0433s0010 Medicago truncatula HOM05D005113 ORTHO05D006045 2.7e-07 59.3 62 54.8
Nitab4.5_0000721g0120 Nicotiana tabacum HOM05D005113 ORTHO05D006045 3.6e-07 58.9 138 33.3
TAR369G1050 Trochodendron aralioides HOM05D005113 ORTHO05D006045 6.1e-07 58.2 85 48.2
Thhalv10010863m.g Eutrema salsugineum HOM05D005113 ORTHO05D006045 8.0e-07 57.8 98 42.9
Sabra06G0153800 Salix brachista HOM05D005113 ORTHO05D006045 8.0e-07 57.8 86 41.9
TWI77G0719 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 8.0e-07 57.8 76 44.7
AT3G52360 Arabidopsis thaliana HOM05D005113 ORTHO05D006045 1.0e-06 57.4 83 47.0
THA.LOC104803375 Tarenaya hassleriana HOM05D005113 ORTHO05D006045 1.0e-06 57.4 128 35.2
Aa31LG10G7390 Aethionema arabicum HOM05D005113 ORTHO05D006045 1.4e-06 57.0 88 44.3
AUR62036329 Chenopodium quinoa HOM05D005113 ORTHO05D006045 1.4e-06 57.0 69 47.8
AL5G33010 Arabidopsis lyrata HOM05D005113 ORTHO05D006045 1.8e-06 56.6 83 45.8
CARHR162120 Cardamine hirsuta HOM05D005113 ORTHO05D006045 1.8e-06 56.6 83 48.2
AUR62038432 Chenopodium quinoa HOM05D005113 ORTHO05D006045 1.8e-06 56.6 69 46.4
Carub.0005s1871 Capsella rubella HOM05D005113 ORTHO05D006045 2.3e-06 56.2 83 47.0
Gohir.D04G093000 Gossypium hirsutum HOM05D005113 ORTHO05D006045 4.0e-06 55.5 83 43.4
BcaB02g08576 Brassica carinata HOM05D005113 ORTHO05D006045 5.2e-06 55.1 105 41.0
BcaC02g09265 Brassica carinata HOM05D005113 ORTHO05D006045 5.2e-06 55.1 105 41.0
A04p07080 Brassica napus HOM05D005113 ORTHO05D006045 5.2e-06 55.1 105 41.0
C04p40660 Brassica napus HOM05D005113 ORTHO05D006045 5.2e-06 55.1 105 41.0
BolC4t25648H Brassica oleracea HOM05D005113 ORTHO05D006045 5.2e-06 55.1 105 41.0
BraA04t16405Z Brassica rapa HOM05D005113 ORTHO05D006045 5.2e-06 55.1 105 41.0
Potri.006G200000 Populus trichocarpa HOM05D005113 ORTHO05D006045 5.2e-06 55.1 86 40.7


User provided reference genes

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