Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0007206 Lotus japonicus HOM05D000007 ORTHO05D000017 1.6e-57 225.7 103 100.0
Lj1g0023827 Lotus japonicus HOM05D000007 ORTHO05D000017 8.1e-17 90.5 113 47.8
Glyma.10G117700 Glycine max HOM05D000007 ORTHO05D000017 1.8e-16 89.4 110 50.0
Glyma.07G187200 Glycine max HOM05D000007 ORTHO05D000017 1.5e-15 86.3 89 47.2
Glyma.16G163966 Glycine max HOM05D000007 ORTHO05D000017 2.6e-15 85.5 99 47.5
VMungo1383G2453 Vigna mungo HOM05D000007 ORTHO05D000017 3.4e-15 85.1 108 48.1
Glyma.16G202800 Glycine max HOM05D000007 ORTHO05D000017 4.4e-15 84.7 117 46.2
Glyma.07G148300 Glycine max HOM05D000007 ORTHO05D000017 7.6e-15 84.0 109 45.9
Glyma.16G202900 Glycine max HOM05D000007 ORTHO05D000017 7.6e-15 84.0 108 48.1
Glyma.18G274800 Glycine max HOM05D000007 ORTHO05D000017 7.6e-15 84.0 109 48.6
Glyma.16G203000 Glycine max HOM05D000007 ORTHO05D000017 1.3e-14 83.2 111 45.9
Medtr4g117750 Medicago truncatula HOM05D000007 ORTHO05D000017 2.2e-14 82.4 91 46.2
Phvul.008G026000 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 2.2e-14 82.4 103 45.6
Medtr5g023000 Medicago truncatula HOM05D000007 ORTHO05D000017 2.9e-14 82.0 86 53.5
Glyma.08G252300 Glycine max HOM05D000007 ORTHO05D000017 3.8e-14 81.6 115 45.2
Medtr4g023440 Medicago truncatula HOM05D000007 ORTHO05D000017 8.4e-14 80.5 90 48.9
Glyma.16G202600 Glycine max HOM05D000007 ORTHO05D000017 1.1e-13 80.1 108 48.1
Glyma.20G073200 Glycine max HOM05D000007 ORTHO05D000017 1.1e-13 80.1 109 42.2
Medtr4g116320 Medicago truncatula HOM05D000007 ORTHO05D000017 1.1e-13 80.1 95 49.5
Medtr4g118360 Medicago truncatula HOM05D000007 ORTHO05D000017 1.1e-13 80.1 88 51.1
Glyma.08G098000 Glycine max HOM05D000007 ORTHO05D000017 1.4e-13 79.7 91 45.1
Psat3g105080 Pisum sativum HOM05D000007 ORTHO05D000017 1.4e-13 79.7 87 47.1
Medtr1g055195 Medicago truncatula HOM05D000007 ORTHO05D000017 1.9e-13 79.3 89 49.4
Phvul.008G026150 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 1.9e-13 79.3 107 49.5
VMungo1383G2610 Vigna mungo HOM05D000007 ORTHO05D000017 2.4e-13 79.0 104 47.1
Medtr4g117870 Medicago truncatula HOM05D000007 ORTHO05D000017 4.2e-13 78.2 97 45.4
Medtr8g040935 Medicago truncatula HOM05D000007 ORTHO05D000017 4.2e-13 78.2 87 49.4
Medtr4g109270 Medicago truncatula HOM05D000007 ORTHO05D000017 9.3e-13 77.0 85 48.2
Medtr7g079370 Medicago truncatula HOM05D000007 ORTHO05D000017 9.3e-13 77.0 94 46.8
Medtr5g097210 Medicago truncatula HOM05D000007 ORTHO05D000017 2.1e-12 75.9 87 49.4
Glyma.18G274700 Glycine max HOM05D000007 ORTHO05D000017 2.7e-12 75.5 106 45.3
Medtr5g070088 Medicago truncatula HOM05D000007 ORTHO05D000017 2.7e-12 75.5 101 41.6
TPR.G2733 Trifolium pratense HOM05D000007 ORTHO05D000017 2.7e-12 75.5 88 51.1
TPR.G29656 Trifolium pratense HOM05D000007 ORTHO05D000017 2.7e-12 75.5 93 41.9
Medtr4g117770 Medicago truncatula HOM05D000007 ORTHO05D000017 3.5e-12 75.1 88 45.5
Medtr4g117780 Medicago truncatula HOM05D000007 ORTHO05D000017 3.5e-12 75.1 88 45.5
Medtr4g117810 Medicago truncatula HOM05D000007 ORTHO05D000017 3.5e-12 75.1 88 45.5
Phvul.009G054900 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 3.5e-12 75.1 86 47.7
TPR.G31268 Trifolium pratense HOM05D000007 ORTHO05D000017 3.5e-12 75.1 101 43.6
Medtr4g023130 Medicago truncatula HOM05D000007 ORTHO05D000017 4.6e-12 74.7 98 49.0
Medtr6g060650 Medicago truncatula HOM05D000007 ORTHO05D000017 4.6e-12 74.7 92 48.9
Phvul.003G095700 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 4.6e-12 74.7 93 47.3
Glyma.08G251800 Glycine max HOM05D000007 ORTHO05D000017 6.0e-12 74.3 76 56.6
Medtr4g117530 Medicago truncatula HOM05D000007 ORTHO05D000017 6.0e-12 74.3 84 48.8
Medtr7g079450 Medicago truncatula HOM05D000007 ORTHO05D000017 6.0e-12 74.3 86 45.3
Glyma.08G251600 Glycine max HOM05D000007 ORTHO05D000017 7.8e-12 73.9 109 47.7
Medtr4g118400 Medicago truncatula HOM05D000007 ORTHO05D000017 7.8e-12 73.9 88 48.9
Psat4g035560 Pisum sativum HOM05D000007 ORTHO05D000017 7.8e-12 73.9 94 43.6
Medtr5g070130 Medicago truncatula HOM05D000007 ORTHO05D000017 1.0e-11 73.6 101 41.6
Glyma.01G232700 Glycine max HOM05D000007 ORTHO05D000017 1.3e-11 73.2 109 43.1
Medtr4g116330 Medicago truncatula HOM05D000007 ORTHO05D000017 1.7e-11 72.8 95 46.3
Medtr5g070080 Medicago truncatula HOM05D000007 ORTHO05D000017 1.7e-11 72.8 102 49.0
TPR.G29667 Trifolium pratense HOM05D000007 ORTHO05D000017 1.7e-11 72.8 95 41.1
Medtr4g023080 Medicago truncatula HOM05D000007 ORTHO05D000017 2.3e-11 72.4 97 47.4
Glyma.18G274900 Glycine max HOM05D000007 ORTHO05D000017 3.0e-11 72.0 117 46.2
Medtr4g094365 Medicago truncatula HOM05D000007 ORTHO05D000017 3.0e-11 72.0 94 44.7
Psat0s430g0040 Pisum sativum HOM05D000007 ORTHO05D000017 3.0e-11 72.0 90 43.3
Glyma.06G197200 Glycine max HOM05D000007 ORTHO05D000017 5.1e-11 71.2 116 40.5
Medtr3g103020 Medicago truncatula HOM05D000007 ORTHO05D000017 5.1e-11 71.2 98 42.9
Medtr4g109280 Medicago truncatula HOM05D000007 ORTHO05D000017 5.1e-11 71.2 88 46.6
Medtr7g117720 Medicago truncatula HOM05D000007 ORTHO05D000017 5.1e-11 71.2 92 51.1
Medtr8g102520 Medicago truncatula HOM05D000007 ORTHO05D000017 5.1e-11 71.2 93 44.1
Phvul.011G009500 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 5.1e-11 71.2 93 45.2
TPR.G20131 Trifolium pratense HOM05D000007 ORTHO05D000017 5.1e-11 71.2 89 48.3
TPR.G25431 Trifolium pratense HOM05D000007 ORTHO05D000017 5.1e-11 71.2 102 46.1
Glyma.17G017600 Glycine max HOM05D000007 ORTHO05D000017 6.6e-11 70.9 90 43.3
Medtr4g023380 Medicago truncatula HOM05D000007 ORTHO05D000017 6.6e-11 70.9 90 45.6
TPR.G8751 Trifolium pratense HOM05D000007 ORTHO05D000017 6.6e-11 70.9 92 45.7
TPR.G29653 Trifolium pratense HOM05D000007 ORTHO05D000017 8.7e-11 70.5 88 45.5
VMungo1215G3073 Vigna mungo HOM05D000007 ORTHO05D000017 8.7e-11 70.5 92 44.6
Glyma.08G159066 Glycine max HOM05D000007 ORTHO05D000017 1.1e-10 70.1 106 43.4
Lj2g0023053 Lotus japonicus HOM05D000007 ORTHO05D000017 1.5e-10 69.7 104 45.2
Medtr4g117720 Medicago truncatula HOM05D000007 ORTHO05D000017 1.5e-10 69.7 92 46.7
TPR.G29654 Trifolium pratense HOM05D000007 ORTHO05D000017 1.5e-10 69.7 103 39.8
TPR.G29662 Trifolium pratense HOM05D000007 ORTHO05D000017 1.5e-10 69.7 89 43.8
Glyma.08G252000 Glycine max HOM05D000007 ORTHO05D000017 1.9e-10 69.3 102 45.1
Lalb_Chr20g0110871 Lupinus albus HOM05D000007 ORTHO05D000017 1.9e-10 69.3 100 41.0
TPR.G31270 Trifolium pratense HOM05D000007 ORTHO05D000017 1.9e-10 69.3 93 44.1
TPR.G33673 Trifolium pratense HOM05D000007 ORTHO05D000017 1.9e-10 69.3 94 42.6
Medtr3g034180 Medicago truncatula HOM05D000007 ORTHO05D000017 2.5e-10 68.9 94 46.8
Medtr6g463430 Medicago truncatula HOM05D000007 ORTHO05D000017 2.5e-10 68.9 99 44.4
Medtr8g098830 Medicago truncatula HOM05D000007 ORTHO05D000017 2.5e-10 68.9 60 53.3
Psat0s430g0080 Pisum sativum HOM05D000007 ORTHO05D000017 2.5e-10 68.9 90 44.4
Ca_22254_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 3.3e-10 68.6 88 48.9
Lj2g0025952 Lotus japonicus HOM05D000007 ORTHO05D000017 3.3e-10 68.6 85 49.4
Medtr1g055165 Medicago truncatula HOM05D000007 ORTHO05D000017 3.3e-10 68.6 104 41.3
Medtr1g055175 Medicago truncatula HOM05D000007 ORTHO05D000017 3.3e-10 68.6 104 41.3
Phvul.009G145600 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 4.3e-10 68.2 89 42.7
Glyma.06G126800 Glycine max HOM05D000007 ORTHO05D000017 5.6e-10 67.8 98 40.8
Lj2g0026007 Lotus japonicus HOM05D000007 ORTHO05D000017 5.6e-10 67.8 85 48.2
Medtr1g055250 Medicago truncatula HOM05D000007 ORTHO05D000017 5.6e-10 67.8 101 38.6
Medtr3g034160 Medicago truncatula HOM05D000007 ORTHO05D000017 5.6e-10 67.8 91 46.2
Lalb_Chr01g0019361 Lupinus albus HOM05D000007 ORTHO05D000017 7.3e-10 67.4 89 41.6
Glyma.17G162200 Glycine max HOM05D000007 ORTHO05D000017 9.6e-10 67.0 108 39.8
Lj2g0027921 Lotus japonicus HOM05D000007 ORTHO05D000017 9.6e-10 67.0 85 48.2
Medtr4g114700 Medicago truncatula HOM05D000007 ORTHO05D000017 9.6e-10 67.0 60 53.3
Medtr4g118380 Medicago truncatula HOM05D000007 ORTHO05D000017 9.6e-10 67.0 62 50.0
Psat4g032360 Pisum sativum HOM05D000007 ORTHO05D000017 9.6e-10 67.0 86 47.7
Psat4g061880 Pisum sativum HOM05D000007 ORTHO05D000017 9.6e-10 67.0 90 46.7
VMungo1309G0382 Vigna mungo HOM05D000007 ORTHO05D000017 9.6e-10 67.0 72 48.6
Medtr7g079420 Medicago truncatula HOM05D007740 ORTHO05D009757 1.3e-09 66.6 92 44.6
Medtr8g032390 Medicago truncatula HOM05D000007 ORTHO05D000017 1.3e-09 66.6 86 48.8
Medtr8g433030 Medicago truncatula HOM05D000007 ORTHO05D000017 1.3e-09 66.6 86 48.8
Medtr4g021785 Medicago truncatula HOM05D000007 ORTHO05D000017 1.6e-09 66.2 84 51.2
Glyma.06G197100 Glycine max HOM05D000007 ORTHO05D000017 2.1e-09 65.9 104 45.2
Medtr4g122850 Medicago truncatula HOM05D000007 ORTHO05D000017 2.1e-09 65.9 94 42.6
Ca_21571_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 2.8e-09 65.5 84 46.4
Glyma.07G247000 Glycine max HOM05D000007 ORTHO05D000017 2.8e-09 65.5 86 43.0
Lj4g0001610 Lotus japonicus HOM05D000007 ORTHO05D000017 2.8e-09 65.5 87 43.7
Medtr4g122860 Medicago truncatula HOM05D000007 ORTHO05D000017 3.6e-09 65.1 94 43.6
Glyma.06G197000 Glycine max HOM05D000007 ORTHO05D000017 4.8e-09 64.7 101 42.6
Medtr1g055135 Medicago truncatula HOM05D000007 ORTHO05D000017 4.8e-09 64.7 103 39.8
Medtr8g032380 Medicago truncatula HOM05D000007 ORTHO05D000017 4.8e-09 64.7 90 45.6
Medtr8g433040 Medicago truncatula HOM05D000007 ORTHO05D000017 4.8e-09 64.7 90 45.6
TPR.G2751 Trifolium pratense HOM05D000007 ORTHO05D000017 4.8e-09 64.7 94 45.7
Rhsim04G0044500 Rhododendron simsii HOM05D005617 ORTHO05D000521 2.4e-08 62.4 106 34.9
Medtr3g034130 Medicago truncatula HOM05D000007 ORTHO05D000017 3.1e-08 62.0 63 50.8
Medtr4g023090 Medicago truncatula HOM05D000007 ORTHO05D000017 3.1e-08 62.0 103 39.8
Medtr4g118370 Medicago truncatula HOM05D000007 ORTHO05D000017 3.1e-08 62.0 86 43.0
arahy.Tifrunner.gnm1.ann1.IX2ZXQ Arachis hypogaea HOM05D000007 ORTHO05D000017 4.0e-08 61.6 90 45.6
VMungo1215G3363 Vigna mungo HOM05D000007 ORTHO05D000017 4.0e-08 61.6 96 39.6
Medtr4g117850 Medicago truncatula HOM05D000007 ORTHO05D000017 6.9e-08 60.8 88 43.2
Solyc12g098170.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 9.0e-08 60.5 75 41.3
arahy.Tifrunner.gnm1.ann1.HHE3Z8 Arachis hypogaea HOM05D000007 ORTHO05D000017 1.5e-07 59.7 100 36.0
Psat0s1789g0040 Pisum sativum HOM05D000007 ORTHO05D000017 1.5e-07 59.7 85 37.6
arahy.Tifrunner.gnm1.ann1.69ADGD Arachis hypogaea HOM05D000007 ORTHO05D000017 2.0e-07 59.3 100 35.0
arahy.Tifrunner.gnm1.ann1.4I2C1H Arachis hypogaea HOM05D000007 ORTHO05D000017 2.6e-07 58.9 106 36.8
arahy.Tifrunner.gnm1.ann1.XM65SU Arachis hypogaea HOM05D000007 ORTHO05D000017 2.6e-07 58.9 106 36.8
Medtr4g023150 Medicago truncatula HOM05D000007 ORTHO05D000017 4.5e-07 58.2 92 42.4
Medtr4g023190 Medicago truncatula HOM05D000007 ORTHO05D000017 5.8e-07 57.8 92 42.4
Glyma.06G094200 Glycine max HOM05D000007 ORTHO05D000017 7.6e-07 57.4 67 43.3
Lj5g0011900 Lotus japonicus HOM05D000007 ORTHO05D000017 9.9e-07 57.0 88 43.2
Medtr4g023070 Medicago truncatula HOM05D000007 ORTHO05D000017 9.9e-07 57.0 101 36.6
Cfa014273 Carpinus fangiana HOM05D000007 ORTHO05D000521 1.3e-06 56.6 87 35.6
Glyma.09G086500 Glycine max HOM05D000007 ORTHO05D000017 1.3e-06 56.6 46 60.9
arahy.Tifrunner.gnm1.ann1.JF9N4Y Arachis hypogaea HOM05D000007 ORTHO05D000017 1.7e-06 56.2 115 37.4
arahy.Tifrunner.gnm1.ann1.STKI0D Arachis hypogaea HOM05D000007 ORTHO05D000017 1.7e-06 56.2 115 37.4
Glyma.10G132100 Glycine max HOM05D000007 ORTHO05D000017 2.2e-06 55.8 119 36.1
Lj5g0024418 Lotus japonicus HOM05D000007 ORTHO05D000017 2.2e-06 55.8 89 39.3
Psat4g035600 Pisum sativum HOM05D000007 ORTHO05D000017 2.2e-06 55.8 94 41.5
Rhsim09G0052500 Rhododendron simsii HOM05D000007 ORTHO05D000017 2.9e-06 55.5 101 32.7
VMungo1215G0993 Vigna mungo HOM05D000007 ORTHO05D000017 2.9e-06 55.5 104 37.5
arahy.Tifrunner.gnm1.ann1.0ZUA96 Arachis hypogaea HOM05D000007 ORTHO05D000017 4.9e-06 54.7 110 40.0
arahy.Tifrunner.gnm1.ann1.5W8AG1 Arachis hypogaea HOM05D000007 ORTHO05D000017 4.9e-06 54.7 107 35.5
arahy.Tifrunner.gnm1.ann1.M55N9J Arachis hypogaea HOM05D000007 ORTHO05D000017 4.9e-06 54.7 107 35.5
Glyma.02G158600 Glycine max HOM05D000007 ORTHO05D000017 4.9e-06 54.7 60 48.3
arahy.Tifrunner.gnm1.ann1.1HHJ34 Arachis hypogaea HOM05D000007 ORTHO05D000017 8.4e-06 53.9 108 36.1
arahy.Tifrunner.gnm1.ann1.CQJ8WU Arachis hypogaea HOM05D000007 ORTHO05D000017 8.4e-06 53.9 106 38.7


User provided reference genes

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