Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 4.0e-72 274.6 135 100.0
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 2.1e-44 182.6 136 71.3
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 1.9e-42 176.0 136 69.1
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 4.4e-39 164.9 137 63.5
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 9.9e-39 163.7 133 64.7
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 1.3e-38 163.3 139 63.3
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 3.5e-36 155.2 139 64.0
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 1.2e-33 146.7 136 59.6
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 5.4e-29 131.3 132 54.5
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 1.6e-28 129.8 133 48.1
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 1.0e-27 127.1 105 65.7
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 1.6e-25 119.8 119 47.1
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 6.2e-25 117.9 101 56.4
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 1.8e-24 116.3 132 50.8
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 1.8e-24 116.3 101 55.4
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 1.2e-23 113.6 111 57.7
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 1.2e-23 113.6 111 57.7
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 1.5e-23 113.2 132 47.7
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 5.8e-23 111.3 133 48.1
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 5.8e-23 111.3 96 53.1
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 7.6e-23 110.9 132 47.0
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 6.4e-22 107.8 106 53.8
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 8.4e-22 107.5 135 43.7
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 8.4e-22 107.5 109 51.4
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 1.1e-21 107.1 94 56.4
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 2.4e-21 105.9 132 47.0
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 2.4e-21 105.9 108 50.0
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 4.2e-21 105.1 132 47.7
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 5.4e-21 104.8 138 48.6
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 7.1e-21 104.4 111 51.4
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 9.3e-21 104.0 136 47.1
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 9.3e-21 104.0 136 47.1
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 1.2e-20 103.6 87 57.5
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 3.5e-20 102.1 101 46.5
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 2.3e-19 99.4 100 48.0
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 3.9e-19 98.6 131 42.7
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 5.1e-19 98.2 113 46.0
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 1.5e-18 96.7 98 45.9
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.9e-18 96.3 135 41.5
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.9e-18 96.3 135 41.5
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 5.6e-18 94.7 135 40.7
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 7.4e-18 94.4 108 44.4
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 9.6e-18 94.0 105 50.5
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 2.1e-17 92.8 128 43.8
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 2.1e-17 92.8 106 49.1
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 2.1e-17 92.8 99 45.5
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 2.8e-17 92.4 98 43.9
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 3.6e-17 92.0 133 39.8
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 3.6e-17 92.0 90 51.1
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 1.4e-16 90.1 132 45.5
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 1.8e-16 89.7 120 43.3
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 1.8e-16 89.7 132 40.9
MBI10_g37696_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 4.0e-16 88.6 104 48.1
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 4.0e-16 88.6 96 45.8
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 6.9e-16 87.8 112 40.2
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 6.9e-16 87.8 111 45.0
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 6.9e-16 87.8 111 45.0
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 9.0e-16 87.4 133 39.8
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 1.2e-15 87.0 103 44.7
ATR0326G042 Amborella trichopoda HOM05D007637 ORTHO05D009508 2.0e-15 86.3 119 37.8
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 2.0e-15 86.3 133 39.1
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 2.0e-15 86.3 128 44.5
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 3.4e-15 85.5 118 43.2
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 3.4e-15 85.5 96 43.8
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 3.4e-15 85.5 96 43.8
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 5.8e-15 84.7 109 46.8
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 1.3e-14 83.6 108 42.6
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 2.2e-14 82.8 102 45.1
TWI79G1694 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 8.4e-14 80.9 97 43.3
HanXRQChr09g0262421 Helianthus annuus HOM05D007637 ORTHO05D009508 1.9e-13 79.7 99 41.4
Thecc.04G124800 Theobroma cacao HOM05D007637 ORTHO05D009508 3.2e-13 79.0 75 46.7
TWI74G0234 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 1.2e-12 77.0 117 44.4
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.6e-12 76.6 138 37.7
Lsat_1_v5_gn_4_155320 Lactuca sativa HOM05D007637 ORTHO05D009508 2.1e-12 76.3 99 40.4
Nitab4.5_0002456g0080 Nicotiana tabacum HOM05D007637 ORTHO05D009508 2.7e-12 75.9 96 42.7
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 3.5e-12 75.5 140 41.4
HanXRQChr09g0262411 Helianthus annuus HOM05D007637 ORTHO05D009508 2.3e-11 72.8 100 42.0
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 3.0e-11 72.4 96 41.7
Rhsim09G0068300 Rhododendron simsii HOM05D007637 ORTHO05D009508 3.0e-11 72.4 137 37.2
QL02p049171 Quercus lobata HOM05D007637 ORTHO05D009508 4.3e-10 68.6 49 59.2
Solyc04g007585.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 2.8e-09 65.9 101 36.6
Glyma.10G266100 Glycine max HOM05D007637 ORTHO05D009508 3.7e-09 65.5 95 40.0
CiPaw.05G246900 Carya illinoinensis HOM05D007637 ORTHO05D009508 4.8e-09 65.1 96 39.6
PGSC0003DMG400010395 Solanum tuberosum HOM05D007637 ORTHO05D009508 4.8e-09 65.1 120 36.7
QL01p002403 Quercus lobata HOM05D006556 ORTHO05D008146 8.2e-09 64.3 89 41.6
Glyma.20G124500 Glycine max HOM05D007637 ORTHO05D009508 1.4e-08 63.5 132 34.1
Actinidia31983 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.8e-08 63.2 94 44.7
COL.COLO4_38443 Corchorus olitorius HOM05D007637 ORTHO05D009508 3.1e-08 62.4 110 37.3
Eucgr.G02214 Eucalyptus grandis HOM05D007637 ORTHO05D009508 4.0e-08 62.0 91 39.6
Nitab4.5_0002644g0060 Nicotiana tabacum HOM05D007637 ORTHO05D009508 4.0e-08 62.0 88 38.6
Phvul.007G035600 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 6.9e-08 61.2 94 35.1
Nitab4.5_0002456g0100 Nicotiana tabacum HOM05D007637 ORTHO05D009508 9.0e-08 60.8 92 37.0
Actinidia33410 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.5e-07 60.1 109 40.4
HanXRQChr11g0325281 Helianthus annuus HOM05D007637 ORTHO05D009508 1.5e-07 60.1 135 29.6
MBI16_g21183_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 4.5e-07 58.5 51 52.9
Actinidia15914 Actinidia chinensis HOM05D007637 ORTHO05D009508 5.8e-07 58.2 116 38.8


User provided reference genes

Program Settings