Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0006603 Lotus japonicus HOM05D008018 ORTHO05D001531 5.2e-47 190.7 93 100.0
arahy.Tifrunner.gnm1.ann1.1WI4WZ Arachis hypogaea HOM05D008018 ORTHO05D001531 3.4e-30 134.8 85 77.6
arahy.Tifrunner.gnm1.ann1.RMBA11 Arachis hypogaea HOM05D008018 ORTHO05D001531 4.4e-30 134.4 85 77.6
Glyma.03G228000 Glycine max HOM05D008018 ORTHO05D001531 5.8e-30 134.0 96 76.0
Glyma.19G225200 Glycine max HOM05D008018 ORTHO05D001531 1.1e-28 129.8 96 75.0
Phvul.001G221900 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.9e-28 129.0 92 75.0
Psat3g015160 Pisum sativum HOM05D008018 ORTHO05D001531 9.2e-28 126.7 84 75.0
Phvul.007G205200 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.0e-26 123.2 89 69.7
Glyma.20G091900 Glycine max HOM05D008018 ORTHO05D001531 6.6e-26 120.6 89 66.3
Lj5g0006453 Lotus japonicus HOM05D008018 ORTHO05D001531 6.6e-26 120.6 93 67.7
Lj5g0009947 Lotus japonicus HOM05D008018 ORTHO05D001531 6.6e-26 120.6 93 67.7
Lalb_Chr21g0310051 Lupinus albus HOM05D008018 ORTHO05D001531 1.5e-25 119.4 76 72.4
Medtr7g111500 Medicago truncatula HOM05D008018 ORTHO05D001531 1.5e-25 119.4 83 71.1
Glyma.10G143300 Glycine max HOM05D008018 ORTHO05D001531 4.3e-25 117.9 90 65.6
Psat6g154000 Pisum sativum HOM05D008018 ORTHO05D001531 5.6e-25 117.5 92 66.3
Medtr0187s0030 Medicago truncatula HOM05D008018 ORTHO05D001531 9.5e-25 116.7 94 67.0
Medtr0187s0060 Medicago truncatula HOM05D008018 ORTHO05D001531 9.5e-25 116.7 94 67.0
Lalb_Chr02g0147531 Lupinus albus HOM05D008018 ORTHO05D001531 3.6e-24 114.8 85 67.1
Lalb_Chr06g0167291 Lupinus albus HOM05D008018 ORTHO05D001531 4.7e-24 114.4 87 66.7
Psat6g153880 Pisum sativum HOM05D008018 ORTHO05D001531 3.1e-23 111.7 93 63.4
Psat2g102520 Pisum sativum HOM05D008018 ORTHO05D001531 4.0e-23 111.3 88 65.9
Psat6g154040 Pisum sativum HOM05D008018 ORTHO05D001531 8.9e-23 110.2 93 63.4
Ca_10205_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 2.0e-22 109.0 94 63.8
Psat6g155760 Pisum sativum HOM05D008018 ORTHO05D001531 3.4e-22 108.2 93 62.4
Ca_10204_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 7.6e-22 107.1 96 62.5
Ca_10202_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.7e-21 105.9 94 61.7
Ca_10203_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.7e-21 105.9 94 61.7
Psat6g153800 Pisum sativum HOM05D008018 ORTHO05D001531 2.2e-21 105.5 83 62.7
Psat2g102400 Pisum sativum HOM05D008018 ORTHO05D001531 1.9e-20 102.4 93 60.2
Psat2g102480 Pisum sativum HOM05D008018 ORTHO05D001531 1.9e-20 102.4 93 60.2
Psat2g102440 Pisum sativum HOM05D008018 ORTHO05D001531 9.2e-20 100.1 83 62.7
Medtr1g084830 Medicago truncatula HOM05D008018 ORTHO05D001531 2.7e-19 98.6 94 56.4
Medtr1g484970 Medicago truncatula HOM05D008018 ORTHO05D001531 7.8e-19 97.1 95 56.8
Medtr1g485000 Medicago truncatula HOM05D008018 ORTHO05D001531 7.8e-19 97.1 95 56.8
Glyma.10G143200 Glycine max HOM05D008018 ORTHO05D001531 1.6e-16 89.4 83 55.4
Medtr1g084900 Medicago truncatula HOM05D008018 ORTHO05D001531 1.4e-15 86.3 81 56.8
Glyma.10G143000 Glycine max HOM05D008018 ORTHO05D001531 1.8e-15 85.9 84 56.0
Medtr0187s0080 Medicago truncatula HOM05D008018 ORTHO05D001531 1.8e-15 85.9 72 58.3
Phvul.007G205400 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 6.8e-15 84.0 83 51.8
Phvul.007G205600 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 6.8e-15 84.0 83 51.8
Medtr0187s0020 Medicago truncatula HOM05D008018 ORTHO05D001531 3.4e-14 81.6 82 56.1
Psat6g156960 Pisum sativum HOM05D008018 ORTHO05D001531 3.4e-14 81.6 84 56.0
Glyma.20G091600 Glycine max HOM05D008018 ORTHO05D001531 4.4e-14 81.3 84 54.8
Glyma.20G091800 Glycine max HOM05D008018 ORTHO05D001531 4.4e-14 81.3 84 54.8
Psat6g154160 Pisum sativum HOM05D008018 ORTHO05D001531 4.4e-14 81.3 82 57.3
Phvul.007G205300 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 7.6e-14 80.5 83 48.2
Medtr1g084840 Medicago truncatula HOM05D008018 ORTHO05D001531 9.9e-14 80.1 84 53.6
Glyma.10G143100 Glycine max HOM05D008018 ORTHO05D001531 1.3e-13 79.7 84 51.2
Medtr1g084920 Medicago truncatula HOM05D008018 ORTHO05D001531 1.3e-13 79.7 81 54.3
Psat6g154200 Pisum sativum HOM05D008018 ORTHO05D001531 2.9e-13 78.6 84 53.6
Lalb_Chr21g0310041 Lupinus albus HOM05D008018 ORTHO05D001531 3.8e-13 78.2 81 49.4
Glyma.20G091700 Glycine max HOM05D008018 ORTHO05D001531 8.4e-13 77.0 83 49.4
Medtr0187s0050 Medicago truncatula HOM05D008018 ORTHO05D001531 1.1e-12 76.6 82 52.4
Medtr0187s0070 Medicago truncatula HOM05D008018 ORTHO05D001531 1.1e-12 76.6 82 52.4
Medtr1g485020 Medicago truncatula HOM05D008018 ORTHO05D001531 1.4e-12 76.3 82 53.7
VMungo0720G1916 Vigna mungo HOM05D008018 ORTHO05D001531 2.4e-12 75.5 72 50.0
Ca_10206_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 4.2e-12 74.7 79 51.9
Lalb_Chr02g0147521 Lupinus albus HOM05D008018 ORTHO05D001531 5.4e-12 74.3 81 49.4
Medtr1g484990 Medicago truncatula HOM05D008018 ORTHO05D001531 5.4e-12 74.3 81 49.4
Psat6g154080 Pisum sativum HOM05D008018 ORTHO05D001531 7.1e-12 73.9 82 52.4
Lj5g0000373 Lotus japonicus HOM05D008018 ORTHO05D001531 1.6e-11 72.8 86 51.2
Lj5g0007331 Lotus japonicus HOM05D008018 ORTHO05D001531 1.6e-11 72.8 86 51.2
TPR.G18867 Trifolium pratense HOM05D008018 ORTHO05D001531 2.7e-11 72.0 81 49.4
TPR.G2630 Trifolium pratense HOM05D008018 ORTHO05D001531 2.7e-11 72.0 81 49.4
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 6.0e-11 70.9 83 50.6
Psat6g157040 Pisum sativum HOM05D008018 ORTHO05D001531 6.0e-11 70.9 84 48.8
TPR.G2624 Trifolium pratense HOM05D008018 ORTHO05D001531 1.7e-10 69.3 81 46.9
Psat6g154120 Pisum sativum HOM05D008018 ORTHO05D001531 2.3e-10 68.9 71 52.1
TAR633G1086 Trochodendron aralioides HOM05D002165 ORTHO05D001531 1.1e-09 66.6 83 53.0
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 1.5e-09 66.2 82 52.4
Oeu000103.1 Olea europaea HOM05D008018 ORTHO05D001531 1.9e-09 65.9 73 49.3
Migut.B00883 Erythranthe guttata HOM05D002165 ORTHO05D001531 4.3e-09 64.7 71 49.3
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 7.3e-09 63.9 80 45.0
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 7.3e-09 63.9 80 45.0
TWI12G1307 Tripterygium wilfordii HOM05D002165 ORTHO05D001531 1.6e-08 62.8 98 45.9
CsaV3_6G002670 Cucumis sativus L. HOM05D002165 ORTHO05D001531 2.1e-08 62.4 87 43.7
MELO3C025020.2 Cucumis melo HOM05D002165 ORTHO05D001531 3.6e-08 61.6 85 44.7
Lalb_Chr06g0167281 Lupinus albus HOM05D008018 ORTHO05D001531 4.8e-08 61.2 81 45.7
Nitab4.5_0000800g0060 Nicotiana tabacum HOM05D002165 ORTHO05D001531 4.8e-08 61.2 64 48.4
Nitab4.5_0003573g0030 Nicotiana tabacum HOM05D002165 ORTHO05D001531 4.8e-08 61.2 64 48.4
Nitab4.5_0003573g0040 Nicotiana tabacum HOM05D002165 ORTHO05D001531 4.8e-08 61.2 64 48.4
MELO3C025017.2 Cucumis melo HOM05D002165 ORTHO05D001531 6.2e-08 60.8 87 41.4
TAR362G0276 Trochodendron aralioides HOM05D002165 ORTHO05D001531 6.2e-08 60.8 83 49.4
Actinidia17737 Actinidia chinensis HOM05D002165 ORTHO05D001531 1.4e-07 59.7 85 47.1
Manes.03G213400 Manihot esculenta HOM05D002165 ORTHO05D001531 1.4e-07 59.7 82 51.2
Manes.08G107400 Manihot esculenta HOM05D002165 ORTHO05D001531 1.4e-07 59.7 91 41.8
Manes.15G075800 Manihot esculenta HOM05D002165 ORTHO05D001531 1.4e-07 59.7 91 41.8
Oeu061905.1 Olea europaea HOM05D002165 ORTHO05D001531 1.8e-07 59.3 75 48.0
Eucgr.H01327 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.4e-07 58.9 82 43.9
Eucgr.H01329 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.4e-07 58.9 82 43.9
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 3.1e-07 58.5 80 41.2
CsaV3_6G002640 Cucumis sativus L. HOM05D002165 ORTHO05D001531 3.1e-07 58.5 85 42.4
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 4.0e-07 58.2 86 44.2
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 4.0e-07 58.2 86 44.2
Migut.N00975 Erythranthe guttata HOM05D002165 ORTHO05D001531 5.3e-07 57.8 71 49.3
arahy.Tifrunner.gnm1.ann1.NUY1UV Arachis hypogaea HOM05D008018 ORTHO05D001531 6.9e-07 57.4 76 47.4
Eucgr.H01326 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.9e-07 57.4 82 42.7
Eucgr.H01332 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.9e-07 57.4 82 41.5
Eucgr.H01331 Eucalyptus grandis HOM05D002165 ORTHO05D001531 9.0e-07 57.0 83 42.2
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 9.0e-07 57.0 86 43.0
Oeu062787.1 Olea europaea HOM05D002165 ORTHO05D001531 1.2e-06 56.6 71 50.7
Phvul.001G221800 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.2e-06 56.6 77 45.5
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.5e-06 56.2 78 41.0
Ciclev10013684m.g Citrus clementina HOM05D002165 ORTHO05D001531 2.0e-06 55.8 77 39.0
Eucgr.H01324 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.0e-06 55.8 82 42.7
Eucgr.H01330 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.0e-06 55.8 82 42.7
Eucgr.H01328 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.6e-06 55.5 82 42.7
Eucgr.H01325 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.4e-06 55.1 82 41.5
Eucgr.H01333 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.4e-06 55.1 82 41.5
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 3.4e-06 55.1 86 43.0
Rhsim11G0104900 Rhododendron simsii HOM05D002165 ORTHO05D001531 3.4e-06 55.1 93 39.8
Sed0010612 Sechium edule HOM05D008018 ORTHO05D001531 3.4e-06 55.1 78 37.2
Cpa.g.sc146.6 Carica papaya HOM05D002165 ORTHO05D001531 4.4e-06 54.7 73 45.2
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 4.4e-06 54.7 84 35.7
Dinv30952 Davidia involucrata HOM05D002165 ORTHO05D001531 4.4e-06 54.7 60 50.0
arahy.Tifrunner.gnm1.ann1.R57IYC Arachis hypogaea HOM05D008018 ORTHO05D001531 5.8e-06 54.3 76 43.4
DCAR_001886 Daucus carota HOM05D002165 ORTHO05D001531 5.8e-06 54.3 75 41.3
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 5.8e-06 54.3 86 41.9
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 5.8e-06 54.3 86 41.9
Gohir.A02G059800 Gossypium hirsutum HOM05D002165 ORTHO05D001531 5.8e-06 54.3 79 43.0
Gohir.D02G065400 Gossypium hirsutum HOM05D002165 ORTHO05D001531 5.8e-06 54.3 79 43.0
Gorai.005G074100 Gossypium raimondii HOM05D002165 ORTHO05D001531 5.8e-06 54.3 79 43.0
CARHR186860 Cardamine hirsuta HOM05D002165 ORTHO05D001531 7.6e-06 53.9 94 40.4
ClCG00G002170 Citrullus lanatus HOM05D002165 ORTHO05D001531 7.6e-06 53.9 86 41.9
ClCG08G002310 Citrullus lanatus HOM05D002165 ORTHO05D001531 7.6e-06 53.9 86 41.9
ClCG08G002360 Citrullus lanatus HOM05D002165 ORTHO05D001531 7.6e-06 53.9 86 41.9
DCAR_001885 Daucus carota HOM05D002165 ORTHO05D001531 7.6e-06 53.9 75 40.0
Peaxi162Scf00194g00002 Petunia axillaris HOM05D002165 ORTHO05D001531 7.6e-06 53.9 79 38.0
Potri.010G003900 Populus trichocarpa HOM05D002165 ORTHO05D001531 7.6e-06 53.9 83 49.4
Ca_02322_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 9.9e-06 53.5 83 45.8
Ca_30364_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 9.9e-06 53.5 83 45.8
Nitab4.5_0003573g0050 Nicotiana tabacum HOM05D002165 ORTHO05D001531 9.9e-06 53.5 64 45.3


User provided reference genes

Program Settings