Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0006584 Lotus japonicus HOM05D008692 ORTHO05D011196 9.4e-168 594.0 430 100.0
LjContig00081g0012246 Lotus japonicus HOM05D008692 ORTHO05D011196 2.7e-90 336.7 445 56.0
LjContig00081g0016484 Lotus japonicus HOM05D008692 ORTHO05D011196 2.0e-45 187.6 429 48.5
LjContig00081g0017189 Lotus japonicus HOM05D008692 ORTHO05D011196 1.9e-27 127.9 153 50.3
Medtr5g094990 Medicago truncatula HOM05D008692 ORTHO05D015071 9.8e-24 115.5 457 40.9
Glyma.14G015200 Glycine max HOM05D008692 ORTHO05D011196 8.3e-23 112.5 416 37.0
VMungo0647G1494 Vigna mungo HOM05D008692 ORTHO05D011196 1.2e-21 108.6 421 29.2
Medtr5g094960 Medicago truncatula HOM05D008692 ORTHO05D015071 6.0e-21 106.3 458 38.6
Phvul.008G167500 Phaseolus vulgaris HOM05D008692 ORTHO05D011196 6.0e-21 106.3 374 29.1
TPR.G8591 Trifolium pratense HOM05D005718 ORTHO05D004853 5.0e-20 103.2 147 46.3
TPR.G8598 Trifolium pratense HOM05D005718 ORTHO05D004853 2.5e-19 100.9 145 46.2
VMungo0647G0384 Vigna mungo HOM05D008692 ORTHO05D011196 3.3e-19 100.5 420 29.8
Medtr5g094850 Medicago truncatula HOM05D008692 ORTHO05D015071 4.3e-19 100.1 497 35.8
TPR.G8609 Trifolium pratense HOM05D005718 ORTHO05D004853 5.6e-19 99.8 144 44.4
Psat2g008360 Pisum sativum HOM05D008692 ORTHO05D011196 7.3e-19 99.4 138 43.5
Medtr5g095400 Medicago truncatula HOM05D005718 ORTHO05D004853 8.1e-18 95.9 138 45.7
Medtr5g095310 Medicago truncatula HOM05D005718 ORTHO05D004853 4.0e-17 93.6 131 45.0
VMungo0647G0491 Vigna mungo HOM05D009155 ORTHO05D004853 4.0e-17 93.6 429 27.5
Medtr5g095370 Medicago truncatula HOM05D008692 ORTHO05D011196 8.9e-17 92.4 136 42.6
Medtr5g095430 Medicago truncatula HOM05D005718 ORTHO05D004853 1.5e-16 91.7 134 44.0
Ca_06382_v3 Cicer arietinum L. HOM05D008692 ORTHO05D011196 2.6e-16 90.9 159 39.0
Ca_29963_v3 Cicer arietinum L. HOM05D008692 ORTHO05D015071 2.6e-16 90.9 159 39.0
Psat2g009200 Pisum sativum HOM05D008692 ORTHO05D015071 1.3e-15 88.6 441 32.9
Psat2g008400 Pisum sativum HOM05D008692 ORTHO05D011196 3.7e-15 87.0 143 40.6
TPR.G8600 Trifolium pratense HOM05D005718 ORTHO05D004853 1.4e-14 85.1 121 46.3
VMungo0647G1912 Vigna mungo HOM05D008692 ORTHO05D011196 7.1e-14 82.8 133 44.4
Lalb_Chr17g0348841 Lupinus albus HOM05D008692 ORTHO05D011196 1.2e-13 82.0 180 35.0
VMungo0647G2344 Vigna mungo HOM05D000176 ORTHO05D000106 1.2e-13 82.0 142 43.0
VMungo0647G1248 Vigna mungo HOM05D008692 ORTHO05D011196 1.6e-13 81.6 134 44.0
Phvul.008G277142 Phaseolus vulgaris HOM05D008692 ORTHO05D011196 7.8e-13 79.3 112 46.4
Phvul.008G277400 Phaseolus vulgaris HOM05D008692 ORTHO05D011196 5.1e-12 76.6 126 46.8
arahy.Tifrunner.gnm1.ann1.R1C8VV Arachis hypogaea HOM05D008692 ORTHO05D011196 8.6e-12 75.9 115 47.0
Medtr5g094920 Medicago truncatula HOM05D008692 ORTHO05D015071 2.5e-11 74.3 116 44.8
arahy.Tifrunner.gnm1.ann1.1YX8TX Arachis hypogaea HOM05D008692 ORTHO05D011196 5.6e-11 73.2 121 45.5
Medtr5g094950 Medicago truncatula HOM05D008692 ORTHO05D015071 9.5e-11 72.4 159 37.7
VMungo0647G1212 Vigna mungo HOM05D008692 ORTHO05D011196 1.2e-10 72.0 139 38.1
TPR.G14149 Trifolium pratense HOM05D008692 ORTHO05D011196 1.4e-09 68.6 155 36.1
Medtr5g095390 Medicago truncatula HOM05D008692 ORTHO05D015071 1.8e-09 68.2 419 31.5
arahy.Tifrunner.gnm1.ann1.JWE1IW Arachis hypogaea HOM05D017804 ORTHO05D011196 6.8e-09 66.2 132 34.8
Medtr5g095360 Medicago truncatula HOM05D008692 ORTHO05D011196 3.4e-08 63.9 86 47.7
TPR.G14142 Trifolium pratense HOM05D008692 ORTHO05D015071 1.3e-07 62.0 168 35.7
Psat7g256720 Pisum sativum HOM05D008692 ORTHO05D011196 3.7e-07 60.5 91 39.6
TPR.G14169 Trifolium pratense HOM05D008692 ORTHO05D015071 6.4e-07 59.7 123 37.4
Medtr5g094910 Medicago truncatula HOM05D008692 ORTHO05D015071 8.4e-07 59.3 148 32.4
Medtr5g095050 Medicago truncatula HOM05D008692 ORTHO05D011196 9.2e-06 55.8 129 35.7


User provided reference genes

Program Settings