Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 5.0e-114 414.5 209 100.0
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 5.2e-87 324.7 203 79.3
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 4.8e-85 318.2 207 79.2
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 1.1e-84 317.0 207 80.2
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 5.4e-84 314.7 194 79.4
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 7.0e-84 314.3 203 76.4
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 2.0e-83 312.8 203 77.8
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 2.9e-82 308.9 203 76.4
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 2.5e-81 305.8 203 76.8
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 1.6e-80 303.1 172 84.3
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 1.4e-79 300.1 193 75.6
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 5.7e-78 294.7 188 74.5
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 1.3e-77 293.5 182 76.9
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 3.7e-77 292.0 199 71.4
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 1.4e-76 290.0 196 73.5
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 1.8e-76 289.7 182 76.9
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 2.4e-76 289.3 199 70.4
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 5.4e-76 288.1 182 76.4
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 7.0e-76 287.7 193 71.5
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 9.2e-76 287.3 181 75.7
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 9.2e-76 287.3 204 67.6
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 1.2e-75 287.0 188 75.0
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 2.7e-75 285.8 184 75.5
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 4.5e-75 285.0 191 71.2
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 4.5e-75 285.0 195 72.8
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 5.9e-75 284.6 195 72.8
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 1.0e-74 283.9 217 65.4
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 1.0e-74 283.9 188 73.9
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 1.3e-74 283.5 188 74.5
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 5.0e-74 281.6 187 72.7
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 6.6e-74 281.2 187 73.8
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 6.6e-74 281.2 179 75.4
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 8.6e-74 280.8 204 66.7
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 1.1e-73 280.4 185 74.6
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 1.9e-73 279.6 205 66.3
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 1.9e-73 279.6 171 77.2
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 2.5e-73 279.3 187 71.1
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 3.3e-73 278.9 181 70.2
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 4.3e-73 278.5 177 75.7
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 5.6e-73 278.1 207 66.2
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 9.5e-73 277.3 192 70.3
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 9.5e-73 277.3 192 70.3
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 9.5e-73 277.3 189 70.4
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 1.6e-72 276.6 172 74.4
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 2.1e-72 276.2 208 66.3
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 3.6e-72 275.4 211 65.9
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 3.6e-72 275.4 172 75.6
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 8.0e-72 274.2 202 67.3
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 5.2e-71 271.6 194 67.0
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 5.2e-71 271.6 174 73.6
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 6.8e-71 271.2 177 74.6
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 8.9e-71 270.8 172 74.4
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 1.2e-70 270.4 169 75.1
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 1.2e-70 270.4 186 71.5
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 2.0e-70 269.6 172 73.8
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 2.6e-70 269.2 203 66.0
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 2.6e-70 269.2 203 66.0
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 3.4e-70 268.9 203 66.0
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 5.8e-70 268.1 203 65.5
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 5.8e-70 268.1 172 71.5
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 7.5e-70 267.7 172 74.4
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 1.3e-69 266.9 181 70.2
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 1.7e-69 266.5 189 70.4
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 1.7e-69 266.5 189 70.4
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 2.9e-69 265.8 214 61.2
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 4.9e-69 265.0 187 66.8
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 6.4e-69 264.6 182 70.9
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 8.3e-69 264.2 189 68.3
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 8.3e-69 264.2 185 67.0
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 1.4e-68 263.5 217 62.7
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 2.4e-68 262.7 172 71.5
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 9.2e-68 260.8 200 64.5
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 9.2e-68 260.8 214 61.7
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 2.0e-67 259.6 201 63.7
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 1.7e-66 256.5 168 75.6
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 3.9e-66 255.4 199 64.8
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 2.5e-65 252.7 173 65.9
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 4.3e-65 251.9 175 67.4
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 9.5e-65 250.8 175 67.4
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 1.2e-64 250.4 169 77.5
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 6.2e-64 248.1 173 67.6
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 1.4e-63 246.9 198 61.6
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 4.4e-62 241.9 203 63.5
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 4.4e-62 241.9 166 69.9
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 2.2e-61 239.6 211 62.1
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 4.9e-61 238.4 182 64.3
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 3.2e-60 235.7 158 70.9
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 7.0e-60 234.6 157 72.0
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 1.2e-59 233.8 182 63.2
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 1.1e-57 227.3 139 74.8
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 7.3e-57 224.6 174 66.1
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 2.6e-54 216.1 202 56.9
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 3.4e-54 215.7 161 65.2
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 2.9e-53 212.6 213 57.3
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 8.3e-53 211.1 177 61.0
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 8.6e-50 201.1 188 59.6
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 3.6e-48 195.7 154 66.2
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 4.7e-48 195.3 171 55.6
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 8.1e-48 194.5 141 66.7
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 8.9e-47 191.0 166 53.6
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 2.2e-45 186.4 159 61.0
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 6.4e-45 184.9 179 50.3
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 1.1e-44 184.1 124 71.8
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 1.1e-44 184.1 168 51.8
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 4.6e-43 178.7 199 48.2
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 1.7e-42 176.8 177 53.1
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 1.5e-38 163.7 129 58.9
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 4.6e-35 152.1 93 68.8
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 1.3e-34 150.6 94 75.5
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 4.3e-33 145.6 119 61.3
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 1.3e-32 144.1 98 69.4
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 1.3e-32 144.1 102 70.6
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 2.2e-29 133.3 84 72.6
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 1.2e-27 127.5 117 56.4
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 7.9e-27 124.8 88 67.0
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 6.7e-26 121.7 127 50.4
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 7.4e-25 118.2 93 61.3
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 8.1e-24 114.8 143 46.2
Medtr6g083100 Medicago truncatula HOM05D006215 ORTHO05D007719 1.8e-23 113.6 131 50.4
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 4.5e-22 109.0 97 57.7
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 2.2e-21 106.7 69 78.3
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 1.5e-17 94.0 99 54.5
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 3.4e-14 82.8 51 74.5
C02p33520 Brassica napus HOM05D006215 ORTHO05D007719 5.8e-14 82.0 71 63.4
BolC2t09353H Brassica oleracea HOM05D006215 ORTHO05D007719 1.9e-12 77.0 101 47.5
MD11G1262900 Malus domestica HOM05D006215 ORTHO05D007719 1.3e-10 70.9 42 78.6
MCO13G478 Micromonas commoda HOM05D006215 ORTHO05D007719 1.3e-10 70.9 109 32.1
TPR.G38152 Trifolium pratense HOM05D006215 ORTHO05D007719 3.0e-10 69.7 42 78.6
A02p20380 Brassica napus HOM05D006215 ORTHO05D007719 5.7e-09 65.5 48 66.7


User provided reference genes

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