Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 7.3e-107 390.6 198 100.0
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 3.6e-74 282.0 198 73.2
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 1.1e-73 280.4 198 71.2
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 1.5e-72 276.6 198 70.7
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 2.2e-71 272.7 201 69.7
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 8.4e-71 270.8 199 70.9
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 1.2e-69 266.9 199 70.9
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 2.1e-69 266.2 198 68.2
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 4.6e-69 265.0 199 70.4
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 2.3e-68 262.7 198 69.2
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 3.1e-65 252.3 202 66.3
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 1.2e-64 250.4 198 66.7
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 6.7e-60 234.6 198 62.6
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 1.6e-58 229.9 197 61.4
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 2.8e-58 229.2 198 61.1
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 8.2e-58 227.6 201 61.2
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 1.1e-57 227.3 145 71.0
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 1.1e-57 227.3 198 61.1
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 3.1e-57 225.7 202 59.4
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 9.0e-57 224.2 198 60.1
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 9.0e-57 224.2 198 60.1
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 9.0e-57 224.2 197 61.9
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 1.5e-56 223.4 199 60.3
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 3.4e-56 222.2 202 58.4
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 4.5e-56 221.9 199 61.8
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 5.9e-56 221.5 196 58.2
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 1.0e-55 220.7 251 52.2
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 1.3e-55 220.3 142 71.1
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 1.3e-55 220.3 197 58.9
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 5.0e-55 218.4 199 58.8
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 5.0e-55 218.4 200 59.5
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 8.4e-55 217.6 200 59.0
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 8.4e-55 217.6 200 59.0
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 1.4e-54 216.9 198 58.1
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 3.2e-54 215.7 145 69.7
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 3.2e-54 215.7 194 58.8
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 4.2e-54 215.3 201 58.7
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 5.5e-54 214.9 194 59.3
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 9.3e-54 214.2 194 58.8
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.2e-53 213.8 198 59.6
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 2.7e-53 212.6 197 56.3
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 2.7e-53 212.6 198 56.1
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 3.5e-53 212.2 196 55.6
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 4.6e-53 211.8 147 63.9
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 6.1e-53 211.5 196 60.2
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 6.1e-53 211.5 197 57.9
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 7.9e-53 211.1 183 59.6
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 1.3e-52 210.3 202 57.9
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 2.3e-52 209.5 195 57.9
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 2.3e-52 209.5 199 55.8
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 3.0e-52 209.1 198 54.0
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 3.0e-52 209.1 140 68.6
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 3.0e-52 209.1 199 55.3
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 3.9e-52 208.8 199 56.8
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 5.1e-52 208.4 200 56.0
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 6.7e-52 208.0 194 58.2
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 6.7e-52 208.0 221 54.8
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 6.7e-52 208.0 202 56.9
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 8.7e-52 207.6 140 68.6
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 1.5e-51 206.8 202 56.9
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 1.9e-51 206.5 143 66.4
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 2.5e-51 206.1 143 65.7
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 4.3e-51 205.3 196 54.6
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 4.3e-51 205.3 140 68.6
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 5.7e-51 204.9 198 54.5
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 5.7e-51 204.9 203 56.2
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 1.3e-50 203.8 197 56.9
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 1.3e-50 203.8 166 60.8
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.6e-50 203.4 193 57.5
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.6e-50 203.4 193 57.5
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 2.2e-50 203.0 211 54.5
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 2.8e-50 202.6 197 55.3
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 2.8e-50 202.6 188 56.4
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 3.7e-50 202.2 148 65.5
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 1.4e-49 200.3 202 53.0
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 1.8e-49 199.9 199 53.8
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 1.8e-49 199.9 143 67.8
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 2.4e-49 199.5 149 64.4
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 2.4e-49 199.5 198 53.0
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.5e-48 196.8 193 57.0
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 2.0e-48 196.4 150 63.3
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 2.0e-48 196.4 150 63.3
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 3.4e-48 195.7 150 63.3
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 7.7e-48 194.5 190 53.2
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 7.7e-48 194.5 183 59.0
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 1.0e-47 194.1 223 49.8
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 1.3e-47 193.7 198 54.0
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 1.7e-47 193.4 190 52.6
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 2.2e-47 193.0 198 54.0
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 3.8e-47 192.2 226 48.7
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 5.0e-47 191.8 150 62.0
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 5.0e-47 191.8 142 66.2
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 6.5e-47 191.4 198 53.0
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 1.1e-46 190.7 142 62.7
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 1.2e-45 187.2 224 50.0
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.6e-45 186.8 111 77.5
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 1.6e-45 186.8 155 65.2
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 1.4e-44 183.7 142 62.7
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 3.0e-44 182.6 148 61.5
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 6.7e-44 181.4 168 54.8
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 6.7e-44 181.4 136 63.2
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 2.5e-43 179.5 144 59.7
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 1.7e-42 176.8 115 74.8
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 6.3e-42 174.9 116 69.8
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 6.3e-42 174.9 139 60.4
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 1.8e-41 173.3 116 71.6
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 3.1e-41 172.6 128 64.1
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 5.9e-40 168.3 156 60.9
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 7.7e-40 167.9 112 70.5
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 1.2e-37 160.6 156 58.3
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 3.0e-36 156.0 143 53.1
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 5.1e-36 155.2 91 78.0
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 8.8e-36 154.5 145 53.8
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 4.8e-34 148.7 153 56.9
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 8.2e-34 147.9 103 69.9
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 8.2e-34 147.9 104 66.3
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 3.5e-32 142.5 122 55.7
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 4.5e-32 142.1 153 52.9
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 6.5e-31 138.3 89 69.7
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 3.2e-30 136.0 92 68.5
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 3.0e-28 129.4 113 54.0
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 3.3e-27 125.9 115 49.6
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 5.3e-25 118.6 73 71.2
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 2.7e-24 116.3 115 50.4
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 1.9e-22 110.2 85 63.5
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 3.6e-21 105.9 89 52.8
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 1.8e-20 103.6 124 53.2
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 1.5e-19 100.5 106 46.2
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 4.8e-18 95.5 156 43.6
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 1.1e-14 84.3 138 38.4
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 2.7e-13 79.7 69 55.1
Haze_01489 Corylus avellana HOM05D005819 ORTHO05D006780 4.0e-12 75.9 139 38.8
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 8.6e-07 58.2 38 68.4
TAR623G0306 Trochodendron aralioides HOM05D003242 ORTHO05D003593 8.6e-07 58.2 43 58.1


User provided reference genes

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