Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0005258 Lotus japonicus HOM05D006407 ORTHO05D008079 1.3e-238 829.3 423 100.0
Psat6g036520 Pisum sativum HOM05D006407 ORTHO05D008079 1.1e-163 580.5 377 83.0
Medtr1g007490 Medicago truncatula HOM05D006407 ORTHO05D008079 5.1e-158 561.6 340 86.5
Dinv28811 Davidia involucrata HOM05D006407 ORTHO05D008079 2.1e-148 529.6 381 74.3
Haze_03500 Corylus avellana HOM05D006407 ORTHO05D008079 6.2e-148 528.1 383 75.2
Glyma.03G089700 Glycine max HOM05D006407 ORTHO05D008079 6.2e-148 528.1 396 73.0
Cfa010568 Carpinus fangiana HOM05D006407 ORTHO05D008079 2.4e-147 526.2 394 73.6
Glyma.16G083300 Glycine max HOM05D006407 ORTHO05D008079 3.1e-147 525.8 390 74.1
CiPaw.14G043600 Carya illinoinensis HOM05D006407 ORTHO05D008079 1.2e-146 523.9 390 73.1
QL09p046404 Quercus lobata HOM05D006407 ORTHO05D008079 2.9e-145 519.2 400 71.2
Ca_12772_v3 Cicer arietinum L. HOM05D006407 ORTHO05D008079 1.9e-144 516.5 299 89.6
Lalb_Chr07g0194511 Lupinus albus HOM05D006407 ORTHO05D008079 1.9e-144 516.5 404 71.5
Thecc.01G211000 Theobroma cacao HOM05D006407 ORTHO05D008079 2.5e-144 516.2 368 76.6
Actinidia30017 Actinidia chinensis HOM05D006407 ORTHO05D008079 3.2e-144 515.8 372 76.1
arahy.Tifrunner.gnm1.ann1.Q8L9VW Arachis hypogaea HOM05D006407 ORTHO05D008079 3.2e-144 515.8 369 74.5
arahy.Tifrunner.gnm1.ann1.FHDW0K Arachis hypogaea HOM05D006407 ORTHO05D008079 7.1e-144 514.6 361 75.6
ClCG09G008210 Citrullus lanatus HOM05D006407 ORTHO05D008079 7.1e-144 514.6 405 69.9
CSS0030734 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 1.2e-143 513.8 357 77.0
CSS0036527 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 7.9e-143 511.1 357 76.8
TAR636G1997 Trochodendron aralioides HOM05D006407 ORTHO05D008079 1.3e-142 510.4 365 74.2
AT5G48470 Arabidopsis thaliana HOM05D006407 ORTHO05D008079 3.9e-142 508.8 353 76.2
GSVIVG01006226001 Vitis vinifera HOM05D006407 ORTHO05D008079 6.7e-142 508.1 339 78.8
FAN15G1719 Fragaria x ananassa HOM05D006407 ORTHO05D008079 1.1e-141 507.3 385 70.9
AL8G21320 Arabidopsis lyrata HOM05D006407 ORTHO05D008079 1.5e-141 506.9 344 77.3
CsaV3_7G026830 Cucumis sativus L. HOM05D006407 ORTHO05D008079 1.5e-141 506.9 404 68.3
Gorai.N003300 Gossypium raimondii HOM05D006407 ORTHO05D008079 3.3e-141 505.8 348 77.9
Cpa.g.sc8.72 Carica papaya HOM05D006407 ORTHO05D008079 4.3e-141 505.4 406 70.4
FAN27G2095 Fragaria x ananassa HOM05D006407 ORTHO05D008079 7.4e-141 504.6 385 70.4
FAN27G3088 Fragaria x ananassa HOM05D006407 ORTHO05D008079 7.4e-141 504.6 385 70.4
Manes.12G054200 Manihot esculenta HOM05D006407 ORTHO05D008079 7.4e-141 504.6 398 69.6
RcHm_v2.0_Chr6g0282821 Rosa chinensis HOM05D006407 ORTHO05D008079 7.4e-141 504.6 394 69.8
TWI36G1400 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 7.4e-141 504.6 396 69.2
THA.LOC104802645 Tarenaya hassleriana HOM05D006407 ORTHO05D008079 9.7e-141 504.2 369 73.4
Eucgr.H00725 Eucalyptus grandis HOM05D006407 ORTHO05D008079 1.3e-140 503.8 345 78.0
Sed0008140 Sechium edule HOM05D006407 ORTHO05D008079 1.3e-140 503.8 346 76.3
FvH4_2g17800 Fragaria vesca HOM05D006407 ORTHO05D008079 3.7e-140 502.3 364 73.1
TWI18G0256 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 3.7e-140 502.3 387 70.5
Carub.0008s0805 Capsella rubella HOM05D006407 ORTHO05D008079 8.2e-140 501.1 354 74.9
CARHR183610 Cardamine hirsuta HOM05D006407 ORTHO05D008079 8.2e-140 501.1 353 75.4
Aa31sc527G10 Aethionema arabicum HOM05D006407 ORTHO05D008079 1.1e-139 500.7 392 69.9
FAN24G2889 Fragaria x ananassa HOM05D006407 ORTHO05D008079 1.1e-139 500.7 364 72.8
Gohir.A07G159200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 1.8e-139 500.0 345 77.1
Phvul.008G108300 Phaseolus vulgaris HOM05D006407 ORTHO05D008079 1.8e-139 500.0 386 70.7
C09p04840 Brassica napus HOM05D006407 ORTHO05D008079 6.9e-139 498.0 353 73.7
PGR083G0415 Punica granatum HOM05D006407 ORTHO05D008079 1.2e-138 497.3 343 77.8
BcaC04g23774 Brassica carinata HOM05D006407 ORTHO05D008079 2.0e-138 496.5 353 73.4
BolC9t53411H Brassica oleracea HOM05D006407 ORTHO05D008079 2.0e-138 496.5 353 73.4
Sc17g0001660 Simmondsia chinensis HOM05D006407 ORTHO05D008079 4.5e-138 495.4 346 76.6
Aqoxy2G03962 Aquilegia oxysepala HOM05D006407 ORTHO05D008079 7.6e-138 494.6 391 70.6
CANSAT01G1280 Cannabis sativa HOM05D006407 ORTHO05D008079 1.0e-137 494.2 392 68.6
Ciclev10015489m.g Citrus clementina HOM05D006407 ORTHO05D008079 1.0e-137 494.2 395 69.1
BraA09t36088Z Brassica rapa HOM05D006407 ORTHO05D008079 1.3e-137 493.8 353 72.8
Potri.002G251400 Populus trichocarpa HOM05D006407 ORTHO05D008079 1.7e-137 493.4 398 68.3
Peaxi162Scf00335g00087 Petunia axillaris HOM05D006407 ORTHO05D008079 2.2e-137 493.0 370 71.4
A09p04530 Brassica napus HOM05D006407 ORTHO05D008079 2.9e-137 492.7 344 74.1
Hund02795 Selenicereus undatus HOM05D006407 ORTHO05D008079 1.1e-136 490.7 346 74.6
Thhalv10004357m.g Eutrema salsugineum HOM05D006407 ORTHO05D008079 1.9e-136 490.0 345 75.1
BcaB04g19579 Brassica carinata HOM05D006407 ORTHO05D008079 3.2e-136 489.2 345 74.8
Prupe.8G190300 Prunus persica HOM05D006407 ORTHO05D008079 3.2e-136 489.2 415 67.0
vmacro02816 Vaccinium macrocarpon HOM05D006407 ORTHO05D008079 4.2e-136 488.8 419 65.2
Ah.11g051020 Amaranthus hybridus HOM05D006407 ORTHO05D008079 5.5e-136 488.4 345 74.8
Rhsim13G0052700 Rhododendron simsii HOM05D006407 ORTHO05D008079 7.2e-136 488.0 383 68.9
Sopen09g019480 Solanum pennellii HOM05D006407 ORTHO05D008079 7.9e-135 484.6 376 69.9
Hma1.2p1_0161F.1_g071410 Hydrangea macrophylla HOM05D006407 ORTHO05D008079 3.9e-134 482.3 354 73.7
MSTRG.18495 Avicennia marina HOM05D006407 ORTHO05D008079 5.1e-134 481.9 374 70.9
ECA247G2281 Erigeron canadensis HOM05D006407 ORTHO05D008079 6.7e-134 481.5 398 67.8
HPP92_024258 Vanilla planifolia HOM05D006407 ORTHO05D008079 1.1e-133 480.7 384 67.4
Oeu057833.1 Olea europaea HOM05D006407 ORTHO05D008079 1.9e-133 479.9 314 79.3
Sp2g18840 Schrenkiella parvula HOM05D006407 ORTHO05D008079 1.9e-133 479.9 326 76.1
Solyc09g056160.4 Solanum lycopersicum HOM05D006407 ORTHO05D008079 3.3e-133 479.2 416 65.1
PGSC0003DMG400013943 Solanum tuberosum HOM05D006407 ORTHO05D008079 3.3e-133 479.2 346 74.0
PSO017G7241 Papaver somniferum HOM05D006407 ORTHO05D008079 4.3e-133 478.8 346 74.9
Cc01_g16130 Coffea canephora HOM05D006407 ORTHO05D008079 5.7e-133 478.4 342 73.4
MD10G1151900 Malus domestica HOM05D006407 ORTHO05D008079 1.7e-132 476.9 376 69.7
PSO675G1275 Papaver somniferum HOM05D006407 ORTHO05D008079 1.7e-132 476.9 346 74.6
HanXRQChr08g0231421 Helianthus annuus HOM05D006407 ORTHO05D008079 4.8e-132 475.3 355 72.7
Lsat_1_v5_gn_9_16300 Lactuca sativa HOM05D006407 ORTHO05D008079 4.8e-132 475.3 387 68.7
AUR62008121 Chenopodium quinoa HOM05D006407 ORTHO05D008079 2.6e-130 469.5 364 70.1
Gohir.D07G167200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 3.6e-127 459.1 348 73.0
Lj1C101T0 Lonicera japonica HOM05D006407 ORTHO05D008079 7.9e-127 458.0 350 71.1
COL.COLO4_26571 Corchorus olitorius HOM05D006407 ORTHO05D008079 2.3e-126 456.4 385 67.0
Migut.D00736 Erythranthe guttata HOM05D006407 ORTHO05D008079 2.3e-126 456.4 321 75.7
EL10Ac5g10625 Beta vulgaris HOM05D006407 ORTHO05D008079 6.7e-126 454.9 329 74.2
ATR0686G167 Amborella trichopoda HOM05D006407 ORTHO05D008079 5.7e-125 451.8 341 69.5
Zm00001eb169280 Zea mays HOM05D006407 ORTHO05D008079 2.4e-123 446.4 322 70.5
VMungo1383G2551 Vigna mungo HOM05D006407 ORTHO05D008079 1.7e-121 440.3 386 64.5
unitig_64.g29771 Utricularia gibba HOM05D006407 ORTHO05D008079 3.8e-121 439.1 314 73.2
Nitab4.5_0000038g0130 Nicotiana tabacum HOM05D006407 ORTHO05D008079 8.5e-121 438.0 391 63.9
Nitab4.5_0003859g0020 Nicotiana tabacum HOM05D001236 ORTHO05D001090 7.2e-120 434.9 341 69.8
SalBow6G2639 Salvia bowleyana HOM05D006407 ORTHO05D008079 4.8e-116 422.2 286 76.6
Sabra02G0191100 Salix brachista HOM05D006407 ORTHO05D008079 5.3e-115 418.7 318 69.2
Atru.chr6.3545 Acer truncatum HOM05D006407 ORTHO05D008079 1.2e-111 407.5 288 78.5
SGA_v2.0_scaffold29G12072 Striga asiatica HOM05D006407 ORTHO05D008079 6.7e-110 401.7 368 62.8
Os11g0425300 Oryza sativa ssp. japonica HOM05D006407 ORTHO05D008079 7.7e-106 388.3 291 69.4
CDE09G0438 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 1.2e-101 374.4 238 79.8
SEGI_39839 Sequoiadendron giganteum HOM05D006407 ORTHO05D008079 7.7e-98 361.7 312 61.5
HPP92_024262 Vanilla planifolia HOM05D006407 ORTHO05D008079 2.4e-83 313.5 203 77.3
Mapoly0125s0038 Marchantia polymorpha HOM05D006407 ORTHO05D008079 4.0e-78 296.2 318 48.4
SMO367G1011 Selaginella moellendorffii HOM05D006407 ORTHO05D008079 4.1e-75 286.2 311 47.9
BolC7t44437H Brassica oleracea HOM05D006407 ORTHO05D008079 4.6e-74 282.7 296 59.5
Duzib138G1048 Durio zibethinus HOM05D006407 ORTHO05D008079 6.6e-73 278.9 376 48.1
unitig_62.g23866 Utricularia gibba HOM05D006407 ORTHO05D008079 6.6e-73 278.9 281 58.4
Pp3c19_21450 Physcomitrium patens HOM05D006407 ORTHO05D008079 1.2e-71 274.6 316 45.9
C07p39170 Brassica napus HOM05D006407 ORTHO05D008079 8.9e-70 268.5 282 58.2
MBI11_g07407_MAGBIO Magnolia biondii HOM05D006407 ORTHO05D003073 6.0e-66 255.8 158 82.9
Nn1g08257 Nelumbo nucifera HOM05D006407 ORTHO05D008079 6.0e-66 255.8 185 74.6
AagrBONN_evm.TU.Sc2ySwM_368.2294 Anthoceros agrestis HOM05D006407 ORTHO05D008079 3.3e-64 250.0 232 56.5
BcaC06g30794 Brassica carinata HOM05D006407 ORTHO05D008079 1.2e-63 248.1 267 54.7
Nn1g08232 Nelumbo nucifera HOM05D006407 ORTHO05D008079 1.1e-62 245.0 157 79.6
AUR62028699 Chenopodium quinoa HOM05D006407 ORTHO05D008079 3.5e-50 203.4 143 74.8
DCAR_004768 Daucus carota HOM05D006407 ORTHO05D008079 2.1e-47 194.1 156 69.2
BraA06t26831Z Brassica rapa HOM05D006407 ORTHO05D008079 6.7e-41 172.6 128 72.7
A06p39160 Brassica napus HOM05D006407 ORTHO05D008079 4.3e-32 143.3 177 49.7
CBR_g12604 Chara braunii HOM05D001724 ORTHO05D007284 7.4e-32 142.5 252 36.5
Migut.D00733 Erythranthe guttata HOM05D006407 ORTHO05D008079 1.6e-31 141.4 100 76.0
CDE02G0544 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 5.9e-21 106.3 83 69.9
arahy.Tifrunner.gnm1.ann1.91BFZF Arachis hypogaea HOM05D006407 ORTHO05D008079 1.1e-19 102.1 81 67.9
MCO11G451 Micromonas commoda HOM05D006407 ORTHO05D008079 9.7e-16 89.0 263 28.1
arahy.Tifrunner.gnm1.ann1.6HQ4SR Arachis hypogaea HOM05D006407 ORTHO05D008079 4.1e-14 83.6 74 63.5
Cre09.g393800 Chlamydomonas reinhardtii HOM05D006407 ORTHO05D008079 5.3e-14 83.2 350 27.7
Lsat_1_v5_gn_9_60420 Lactuca sativa HOM05D001780 ORTHO05D008079 4.5e-13 80.1 46 84.8
Oeu032606.1 Olea europaea HOM05D006407 ORTHO05D008079 1.3e-12 78.6 48 79.2
arahy.Tifrunner.gnm1.ann1.63F50L Arachis hypogaea HOM05D000300 ORTHO05D000383 1.1e-08 65.5 48 70.8
MD05G1159200 Malus domestica HOM05D006407 ORTHO05D008079 5.7e-08 63.2 46 65.2


User provided reference genes

Program Settings