Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0004670 Lotus japonicus HOM05D004805 ORTHO05D005756 1.7e-140 502.7 250 100.0
LjContig00081g0004731 Lotus japonicus HOM05D004805 ORTHO05D005756 1.2e-130 469.9 250 94.0
TPR.G8592 Trifolium pratense HOM05D004805 ORTHO05D005756 1.0e-129 466.8 250 90.8
Ca_06397_v3 Cicer arietinum L. HOM05D004805 ORTHO05D005756 8.5e-129 463.8 250 90.0
Medtr5g095960 Medicago truncatula HOM05D004805 ORTHO05D005756 2.5e-128 462.2 250 89.2
Psat2g007280 Pisum sativum HOM05D004805 ORTHO05D005756 2.6e-125 452.2 250 87.6
Phvul.008G279200 Phaseolus vulgaris HOM05D004805 ORTHO05D005756 1.3e-121 439.9 251 85.7
Glyma.14G013400 Glycine max HOM05D004805 ORTHO05D005756 2.3e-121 439.1 245 86.5
Glyma.17G150300 Glycine max HOM05D004805 ORTHO05D005756 1.9e-120 436.0 245 85.7
arahy.Tifrunner.gnm1.ann1.KL44N8 Arachis hypogaea HOM05D004805 ORTHO05D005756 3.6e-119 431.8 250 83.6
Lalb_Chr09g0322761 Lupinus albus HOM05D004805 ORTHO05D005756 8.0e-119 430.6 251 85.7
arahy.Tifrunner.gnm1.ann1.1A96RS Arachis hypogaea HOM05D004805 ORTHO05D005756 4.4e-117 424.9 250 83.2
Cfa020188 Carpinus fangiana HOM05D004805 ORTHO05D005756 1.7e-113 412.9 245 80.4
Haze_09828 Corylus avellana HOM05D004805 ORTHO05D005756 4.7e-111 404.8 245 79.2
Atru.chr13.2016 Acer truncatum HOM05D004805 ORTHO05D005756 9.2e-107 390.6 250 74.8
Atru.chr9.1539 Acer truncatum HOM05D004805 ORTHO05D005756 3.5e-106 388.7 246 75.2
Duzib268G0855 Durio zibethinus HOM05D004805 ORTHO05D005756 1.3e-105 386.7 250 75.6
Ciclev10009329m.g Citrus clementina HOM05D004805 ORTHO05D005756 3.0e-105 385.6 250 75.2
CiPaw.12G138400 Carya illinoinensis HOM05D004805 ORTHO05D005756 1.9e-104 382.9 247 74.1
Nn1g07520 Nelumbo nucifera HOM05D004805 ORTHO05D005756 1.9e-104 382.9 250 71.2
GSVIVG01014691001 Vitis vinifera HOM05D004805 ORTHO05D005756 1.9e-104 382.9 250 74.0
TAR626G0989 Trochodendron aralioides HOM05D004805 ORTHO05D005756 7.3e-104 380.9 248 71.8
Dinv10336 Davidia involucrata HOM05D004805 ORTHO05D005756 1.2e-103 380.2 248 72.2
FvH4_3g11630 Fragaria vesca HOM05D004805 ORTHO05D005756 2.1e-103 379.4 250 72.4
CsaV3_3G004240 Cucumis sativus L. HOM05D004805 ORTHO05D005756 2.8e-103 379.0 245 72.7
FAN16G0962 Fragaria x ananassa HOM05D004805 ORTHO05D005756 3.6e-103 378.6 250 72.4
FAN25G0449 Fragaria x ananassa HOM05D004805 ORTHO05D005756 4.7e-103 378.3 250 72.8
ClCG10G004450 Citrullus lanatus HOM05D004805 ORTHO05D005756 1.1e-102 377.1 245 73.1
RcHm_v2.0_Chr5g0018651 Rosa chinensis HOM05D004805 ORTHO05D005756 3.1e-102 375.6 250 72.4
Gorai.004G033700 Gossypium raimondii HOM05D004805 ORTHO05D005756 4.0e-102 375.2 250 72.0
MD05G1261800 Malus domestica HOM05D004805 ORTHO05D005756 6.8e-102 374.4 250 71.2
Prupe.3G149500 Prunus persica HOM05D004805 ORTHO05D005756 7.5e-101 370.9 248 72.2
RcHm_v2.0_Chr7g0241681 Rosa chinensis HOM05D004805 ORTHO05D005756 7.5e-101 370.9 250 70.8
Medtr3g007850 Medicago truncatula HOM05D004805 ORTHO05D005756 2.2e-100 369.4 196 89.3
CSS0002120 Camellia sinensis var. sinensis HOM05D004805 ORTHO05D005756 3.7e-100 368.6 246 68.7
PSO832G0973 Papaver somniferum HOM05D004805 ORTHO05D005756 2.7e-98 362.5 247 71.3
Sed0016007 Sechium edule HOM05D004805 ORTHO05D005756 2.7e-98 362.5 245 69.4
Actinidia30402 Actinidia chinensis HOM05D004805 ORTHO05D005756 1.7e-97 359.8 246 69.5
PSO063G7513 Papaver somniferum HOM05D004805 ORTHO05D005756 1.7e-97 359.8 247 69.6
MELO3C014119.2 Cucumis melo HOM05D004805 ORTHO05D005756 1.5e-96 356.7 283 63.3
Rhsim06G0229900 Rhododendron simsii HOM05D004805 ORTHO05D005756 1.5e-96 356.7 247 68.4
Manes.03G141600 Manihot esculenta HOM05D004805 ORTHO05D005756 9.5e-96 354.0 250 69.2
ECA234G3028 Erigeron canadensis HOM05D004805 ORTHO05D005756 3.6e-95 352.1 246 69.5
Aqoxy4G03118 Aquilegia oxysepala HOM05D004805 ORTHO05D005756 8.1e-95 350.9 251 67.3
CANSAT11G2385 Cannabis sativa HOM05D004805 ORTHO05D005756 1.1e-94 350.5 246 68.7
Eucgr.F03688 Eucalyptus grandis HOM05D004805 ORTHO05D005756 1.8e-94 349.7 250 70.4
Lj1C890G11 Lonicera japonica HOM05D004805 ORTHO05D005756 2.3e-94 349.4 246 68.7
Cc00_g18290 Coffea canephora HOM05D004805 ORTHO05D005756 3.1e-94 349.0 239 68.2
THA.LOC104811668 Tarenaya hassleriana HOM05D004805 ORTHO05D005756 4.0e-94 348.6 244 69.3
Actinidia05003 Actinidia chinensis HOM05D004805 ORTHO05D005756 6.8e-94 347.8 246 66.3
Duzib213G0036 Durio zibethinus HOM05D004805 ORTHO05D005756 2.0e-93 346.3 250 68.8
PGR142G3095 Punica granatum HOM05D004805 ORTHO05D005756 2.0e-93 346.3 248 68.5
VMungo0647G2576 Vigna mungo HOM05D004805 ORTHO05D005756 2.0e-93 346.3 200 82.5
Peaxi162Scf00139g01316 Petunia axillaris HOM05D004805 ORTHO05D005756 4.4e-93 345.1 242 68.2
Lsat_1_v5_gn_9_89740 Lactuca sativa HOM05D004805 ORTHO05D005756 1.3e-92 343.6 245 67.8
SalBow4G0417 Salvia bowleyana HOM05D004805 ORTHO05D005756 1.3e-92 343.6 274 61.7
Sopen07g033800 Solanum pennellii HOM05D004805 ORTHO05D005756 1.3e-92 343.6 242 67.4
Aa31LG3G11710 Aethionema arabicum HOM05D004805 ORTHO05D005756 2.9e-92 342.4 243 66.7
QL08p004083 Quercus lobata HOM05D004805 ORTHO05D005756 2.9e-92 342.4 199 82.9
Potri.013G021900 Populus trichocarpa HOM05D004805 ORTHO05D005756 3.8e-92 342.0 245 68.6
DCAR_013232 Daucus carota HOM05D004805 ORTHO05D005756 6.4e-92 341.3 246 65.0
CAN.G623.13 Capsicum annuum HOM05D004805 ORTHO05D005756 1.1e-91 340.5 243 66.3
HanXRQChr03g0074031 Helianthus annuus HOM05D004805 ORTHO05D005756 1.1e-91 340.5 240 66.7
Potri.005G032300 Populus trichocarpa HOM05D004805 ORTHO05D005756 3.2e-91 339.0 249 67.5
SGA_v2.0_scaffold44G16806 Striga asiatica HOM05D001081 ORTHO05D003320 3.2e-91 339.0 245 66.5
Gohir.D08G035700 Gossypium hirsutum HOM05D004805 ORTHO05D005756 4.1e-91 338.6 250 67.2
MSTRG.27026 Avicennia marina HOM05D004805 ORTHO05D005756 7.1e-91 337.8 249 65.9
Solyc07g065590.4 Solanum lycopersicum HOM05D004805 ORTHO05D005756 7.1e-91 337.8 243 67.5
Sabra05G0034900 Salix brachista HOM05D004805 ORTHO05D005756 1.6e-90 336.7 249 65.9
AL8G31370 Arabidopsis lyrata HOM05D004805 ORTHO05D005756 2.1e-90 336.3 243 67.9
AT5G55810 Arabidopsis thaliana HOM05D004805 ORTHO05D005756 2.7e-90 335.9 243 67.1
Gohir.A08G025200 Gossypium hirsutum HOM05D004805 ORTHO05D005756 6.0e-90 334.7 250 66.0
Carub.0008s1616 Capsella rubella HOM05D004805 ORTHO05D005756 1.9e-88 329.7 243 64.6
CARHR269130 Cardamine hirsuta HOM05D004805 ORTHO05D005756 6.2e-87 324.7 243 65.0
BcaB01g04372 Brassica carinata HOM05D004805 ORTHO05D005756 1.1e-86 323.9 243 64.6
Carub.0005s0937 Capsella rubella HOM05D004805 ORTHO05D005756 1.4e-86 323.6 242 64.9
EL10Ac1g00341 Beta vulgaris HOM05D004805 ORTHO05D005756 1.8e-86 323.2 251 63.7
Carub.0005s0950 Capsella rubella HOM05D004805 ORTHO05D005756 2.4e-86 322.8 242 64.5
MD10G1240100 Malus domestica HOM05D004805 ORTHO05D005756 4.0e-86 322.0 206 74.3
PGSC0003DMG400022170 Solanum tuberosum HOM05D004805 ORTHO05D005756 5.2e-86 321.6 216 69.4
BcaC01g06393 Brassica carinata HOM05D004805 ORTHO05D005756 2.0e-85 319.7 243 63.4
TWI38G2348 Tripterygium wilfordii HOM05D004805 ORTHO05D005756 2.0e-85 319.7 205 74.6
HPP92_025829 Vanilla planifolia HOM05D004805 ORTHO05D005756 2.0e-85 319.7 244 62.3
BcaC04g20199 Brassica carinata HOM05D004805 ORTHO05D005756 3.4e-85 318.9 243 64.2
ATR0090G032 Amborella trichopoda HOM05D004805 ORTHO05D005756 7.6e-85 317.8 231 66.7
Sp6g17690 Schrenkiella parvula HOM05D004805 ORTHO05D005756 9.9e-85 317.4 243 63.8
BcaB08g35939 Brassica carinata HOM05D004805 ORTHO05D005756 1.9e-83 313.2 250 61.6
Zm00001eb191530 Zea mays HOM05D004805 ORTHO05D005756 7.8e-82 307.8 246 62.6
Hma1.2p1_1402F.1_g281100 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 1.0e-81 307.4 216 69.0
vmacro11591 Vaccinium macrocarpon HOM05D004805 ORTHO05D005756 6.6e-81 304.7 258 61.2
Thecc.07G013300 Theobroma cacao HOM05D004805 ORTHO05D005756 2.1e-79 299.7 182 79.1
Sc16g0008090 Simmondsia chinensis HOM05D004805 ORTHO05D005756 6.9e-78 294.7 245 60.0
Hund27237 Selenicereus undatus HOM05D004805 ORTHO05D005756 6.4e-76 288.1 275 56.4
Nitab4.5_0002736g0040 Nicotiana tabacum HOM05D004805 ORTHO05D005756 8.4e-76 287.7 192 69.8
Nitab4.5_0007415g0050 Nicotiana tabacum HOM05D004805 ORTHO05D005756 3.5e-74 282.3 203 66.5
C03p16250 Brassica napus HOM05D004805 ORTHO05D005756 6.7e-73 278.1 216 62.0
Lj3g0007860 Lotus japonicus HOM05D004805 ORTHO05D005756 8.7e-73 277.7 244 66.4
AUR62022629 Chenopodium quinoa HOM05D004805 ORTHO05D005756 1.5e-72 276.9 244 57.4
A03p13810 Brassica napus HOM05D004805 ORTHO05D005756 1.9e-72 276.6 216 60.6
C09p46750 Brassica napus HOM05D004805 ORTHO05D005756 1.3e-71 273.9 217 63.1
BolC9t57526H Brassica oleracea HOM05D004805 ORTHO05D005756 1.3e-71 273.9 217 63.1
A10p13030 Brassica napus HOM05D004805 ORTHO05D005756 2.1e-71 273.1 217 63.1
SGA_v2.0_scaffold192G40544 Striga asiatica HOM05D001081 ORTHO05D003320 2.8e-71 272.7 232 60.3
BraA10t43397Z Brassica rapa HOM05D004805 ORTHO05D005756 8.1e-71 271.2 217 62.7
Pp3c10_25720 Physcomitrium patens HOM05D004805 ORTHO05D005756 2.0e-69 266.5 245 51.8
Pp3c20_23380 Physcomitrium patens HOM05D004805 ORTHO05D005756 2.2e-68 263.1 246 51.2
AagrBONN_evm.TU.Sc2ySwM_362.484 Anthoceros agrestis HOM05D004805 ORTHO05D005756 2.9e-68 262.7 243 51.9
Lsat_1_v5_gn_4_137701 Lactuca sativa HOM05D004805 ORTHO05D005756 3.8e-68 262.3 192 66.7
Mapoly0011s0011 Marchantia polymorpha HOM05D004805 ORTHO05D005756 3.8e-68 262.3 243 53.9
Prupe.4G103800 Prunus persica HOM05D004805 ORTHO05D005756 3.8e-68 262.3 248 55.2
Glyma.19G097900 Glycine max HOM05D004805 ORTHO05D005756 1.4e-67 260.4 144 87.5
Pp3c3_17230 Physcomitrium patens HOM05D004805 ORTHO05D005756 1.6e-66 256.9 245 50.2
CAN.G849.12 Capsicum annuum HOM05D004805 ORTHO05D005756 4.6e-66 255.4 183 63.9
AUR62004423 Chenopodium quinoa HOM05D004805 ORTHO05D005756 5.6e-64 248.4 165 70.3
Hma1.2p1_1516F.1_g288260 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 7.4e-64 248.1 198 64.1
AagrBONN_evm.TU.Sc2ySwM_228.3487 Anthoceros agrestis HOM05D004805 ORTHO05D005756 1.2e-61 240.7 201 54.7
FAN21G3052 Fragaria x ananassa HOM05D004805 ORTHO05D005756 1.2e-61 240.7 220 55.9
Migut.F01027 Erythranthe guttata HOM05D004805 ORTHO05D005756 2.6e-61 239.6 242 51.7
Pp3c13_13680 Physcomitrium patens HOM05D004805 ORTHO05D005756 2.6e-61 239.6 243 47.7
TAR624G1110 Trochodendron aralioides HOM05D004805 ORTHO05D005756 5.5e-59 231.9 196 59.2
CARHR269180 Cardamine hirsuta HOM05D004805 ORTHO05D005756 1.8e-57 226.9 163 65.6
AagrBONN_evm.TU.Sc2ySwM_344.1047 Anthoceros agrestis HOM05D004805 ORTHO05D005756 1.5e-56 223.8 218 50.0
Ah.05g180060 Amaranthus hybridus HOM05D004805 ORTHO05D005756 1.1e-54 217.6 179 62.0
CBR_g34363 Chara braunii HOM05D000019 ORTHO05D000002 3.4e-53 212.6 212 50.0
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 1.4e-51 207.2 172 61.0
SMO364G0361 Selaginella moellendorffii HOM05D004805 ORTHO05D005756 4.2e-51 205.7 213 47.4
Rhsim04G0012600 Rhododendron simsii HOM05D004805 ORTHO05D005756 6.1e-50 201.8 166 61.4
AagrBONN_evm.TU.Sc2ySwM_344.1045 Anthoceros agrestis HOM05D004805 ORTHO05D005756 1.0e-49 201.1 194 51.0
COL.COLO4_09836 Corchorus olitorius HOM05D004805 ORTHO05D005756 2.5e-48 196.4 137 70.1
BraA03t10684Z Brassica rapa HOM05D004805 ORTHO05D005756 4.3e-48 195.7 227 48.0
Os02g0814900 Oryza sativa ssp. japonica HOM05D004805 ORTHO05D005756 1.3e-47 194.1 193 51.8
Cpa.g.sc26.30 Carica papaya HOM05D004805 ORTHO05D005756 6.9e-46 188.3 114 79.8
Glyma.02G300600 Glycine max HOM05D004805 ORTHO05D005756 5.0e-44 182.2 110 83.6
BolC3t14047H Brassica oleracea HOM05D004805 ORTHO05D005756 5.5e-43 178.7 237 45.1
Thhalv10015421m.g Eutrema salsugineum HOM05D004805 ORTHO05D005756 1.2e-42 177.6 192 50.5
ECA240G4670 Erigeron canadensis HOM05D004805 ORTHO05D005756 1.3e-39 167.5 105 76.2
PRCOL_00003123 Prasinoderma coloniale HOM05D004805 ORTHO05D005756 9.1e-38 161.4 218 39.9
Os09g0347900 Oryza sativa ssp. japonica HOM05D004805 ORTHO05D005756 1.5e-37 160.6 104 70.2
unitig_0.g252 Utricularia gibba HOM05D004805 ORTHO05D005756 4.2e-35 152.5 108 64.8
QL08p004070 Quercus lobata HOM05D000031 ORTHO05D005756 1.2e-34 151.0 215 45.6
Hma1.2p1_0226F.1_g095340 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 4.7e-34 149.1 161 52.8
PSO170G0902 Papaver somniferum HOM05D004805 ORTHO05D005756 1.7e-31 140.6 103 63.1
Cfa025186 Carpinus fangiana HOM05D004805 ORTHO05D005756 1.1e-22 111.3 165 38.2
SEGI_22417 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 1.8e-22 110.5 99 55.6
ECA234G1395 Erigeron canadensis HOM05D004805 ORTHO05D005756 2.1e-18 97.1 67 70.1
FAN24G2452 Fragaria x ananassa HOM05D004805 ORTHO05D005756 1.4e-14 84.3 55 69.1
Oeu037059.1 Olea europaea HOM05D004805 ORTHO05D005756 4.1e-14 82.8 65 55.4
SEGI_01519 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 2.5e-11 73.6 72 50.0
CBR_g34381 Chara braunii HOM05D000019 ORTHO05D000048 7.2e-11 72.0 81 44.4
FAN16G1285 Fragaria x ananassa HOM05D004805 ORTHO05D005756 2.1e-10 70.5 44 72.7
Cre14.g626950 Chlamydomonas reinhardtii HOM05D004805 ORTHO05D005756 3.0e-09 66.6 373 22.0
SEGI_37983 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 3.7e-07 59.7 82 37.8


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